New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2657425	51 (1.110)	3 (0.070)	3/254	NT	5.5%	coding (1511/1851 nt)	hscA	iron‑sulfur cluster biosynthesis chaperone HscA
	?	NC_000913	= 2657440	55 (1.250)					coding (1496/1851 nt)	hscA	iron‑sulfur cluster biosynthesis chaperone HscA

ATCAGCAGCCAGCGCGCCGTGCAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCGGTAGCGCCGGAATACCAC  >  NC_000913/2657286‑2657566                                                                                                                                            |                                                                                                                                              aTCAGCCGCCAGCGCGCCGTGCAGCCTTTCCTTCTCTCGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCCCTATCGGTCAGAc                                                                                                                                            <  2:749929/143‑1 (MQ=255) aTCAGCAGCCAGCGCGCCGTGCAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGAc                                                                                                                                            <  1:232007/143‑1 (MQ=255)     gcagcCAGCGCGCCGTGCAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCAGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTa                                                                                                                                        >  1:778192/1‑143 (MQ=255)        gccagcGCGCCGTGCAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCTGTCAGACCGTAAGa                                                                                                                                     >  2:703557/1‑143 (MQ=255)        gccagcGCGCCGTGCAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGa                                                                                                                                     >  2:272803/1‑143 (MQ=255)             cgcgcCGTGCAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTTTTCTGCCAGCATTCGGGCGTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGtt                                                                                                                                <  2:415177/143‑1 (MQ=255)                 ccGTGCAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTtgac                                                                                                                            >  1:561564‑M2/1‑139 (MQ=255)                 ccGTGCAGACGTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTGTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTtgac                                                                                                                            >  2:91447‑M2/1‑139 (MQ=255)                  catgcAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGCTCATAGATGCGATGCCGTGACCTGTCAaaccgtcttacggtctgacc                                                                                                                           <  1:626432‑M1/141‑21 (MQ=255)                  cGTGCAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTtgacc                                                                                                                           >  1:154137‑M2/1‑138 (MQ=255)                  cGTGCAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTtgacc                                                                                                                           <  1:435852‑M2/143‑6 (MQ=255)                      cAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACAGTAAGACAGATTAACCCGac                                                                                                                       >  1:533568/1‑142 (MQ=255)                           tttCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTAATTGAGTCTTTGATAATCGAAGCGCTTTCGCTATCGGTCCGACAGGAACACGGTTTTACCTGAATAgcc                                                                                                                  >  2:356243/1‑141 (MQ=255)                             tCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGc                                                                                                                <  1:53089/143‑1 (MQ=255)                             tCCAGCACACGCGCCGCTTCGACTAGGTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGc                                                                                                                <  1:233877/143‑1 (MQ=255)                             agcAGCACACGCGCCGCTTCTACTTTCTGTGCTGCCAGCAGGCGGGCTTTTACGTCCTGCTCGGCATAGCTCATGGAGTCTATGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGc                                                                                                                <  1:227752/141‑1 (MQ=255)                                  cacaCGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGAGTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCaa                                                                                                           <  1:228141/143‑1 (MQ=255)                                     acGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATCGACGCCTCACCGc                                                                                                        >  1:794490/1‑143 (MQ=255)                                        cgccgcTTCTACTTTGTGTGCTGCAAGCATTCGGGCATGGACGGCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCgg                                                                                                     <  1:289046/143‑1 (MQ=255)                                          ccgcTTCTACTTTTTGTTCTGCCAGCATTCGGGATTTTACGTTCTGCTCGGCATAGGTCATTGAGCCTTTGATCATCGAAGCGATTTCGGTATGGGTCAGACCGTAAGACGGTTTTACCTGGATACACGCCTCGACGCCGGTg                                                                                                   >  2:70168/1‑143 (MQ=255)                                           cgcTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCCGAATAGACGCCTCAACGCCGGTgg                                                                                                  >  2:256652/1‑143 (MQ=255)                                              ttCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAaaccgtcttacggtctgaccgatagcgaaatcgcttc                                                                                                          <  1:216805‑M1/132‑38 (MQ=255)                                              ttCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAaaccgtcttacggtctgaccgatagcgaaatcgcttc                                                                                                          >  2:216805‑M1/1‑95 (MQ=255)                                               tCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGAttt                                                                                              <  1:797746/143‑1 (MQ=255)                                                   cTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTcc                                                                                          >  1:716475/1‑143 (MQ=255)                                                    tttttGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCGACGCCGGTGGATTTCTccc                                                                                         >  1:728307/1‑142 (MQ=255)                                                     ttttGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGCTCATCGCAGCGATTTCGCTATCGGTCAGCCCGTCAGGACCTTTTACCTCAAGCTACGCCTCAACCCCCGCGCATTtctcacc                                                                                        >  2:410721/1‑140 (MQ=255)                                                         gTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGCGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGCCGGTTCGACCTGAATAGACGCCTCAACTCCGGTGGATTTCTCCATCGcc                                                                                    <  2:552831/143‑1 (MQ=255)                                                            cTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGAGTTCTCCATCGCCGTc                                                                                 >  2:847514/1‑143 (MQ=255)                                                               ccAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCCCCGTCACg                                                                              >  2:567843/1‑143 (MQ=255)                                                                 aGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCGTAGAGTGGGTTATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGCTTTCTCCATCGCCGTCACGCt                                                                            >  1:625948/1‑143 (MQ=255)                                                                  gCATTCGGGCTGCTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTc                                                                           <  1:702382/143‑1 (MQ=255)                                                                         ggCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTACATCGCCGTCACGCTCAAAAGAc                                                                    >  1:535634/1‑143 (MQ=255)                                                                          gCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGCCGCCTCGTCGCCGGTGGATTTCTCCATCGCCGTCACGCTAAAAAGAcc                                                                   >  1:316108/1‑143 (MQ=255)                                                                            ttttACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGt                                                                 <  2:161990/143‑1 (MQ=255)                                                                            ttttACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGGCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGCTTTCTCCATCGCCGTCACGCTCAAAAGACCGt                                                                 >  2:344001/1‑143 (MQ=255)                                                                             tgtACGTCCGGCTCGGCATAGCTCTTTGAGTCGTTGATCATCGAAGCGATTTCGCGATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTc                                                                <  2:203437/141‑1 (MQ=255)                                                                                   tCCTGCTCGGCATAGCTCATTGAGTCTTTGAACATCGAAGCGATTTAGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGATGGATGTCTTCATCGCCGTCACACTCACAAGACCGTcaccata                                                          >  2:417648/1‑137 (MQ=255)                                                                                            gCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGCTGTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCCACCTGGag                                                 >  2:845640/1‑142 (MQ=255)                                                                                             cagaGCTCATTGAGTCTGTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAAc                                                <  1:512874/140‑1 (MQ=255)                                                                                                agctgcttGAGTCTTGGATCATCGCAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTc                                             <  1:184888/137‑1 (MQ=255)                                                                                                      ttGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGGCGCGCGa                                       >  2:870616/1‑143 (MQ=255)                                                                                                       tGAGTCTTGGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGaa                                      <  1:594075/143‑1 (MQ=255)                                                                                                         aGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAata                                    <  1:272803/143‑1 (MQ=255)                                                                                                           tCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATg                                  >  2:509277/1‑143 (MQ=255)                                                                                                             tttGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATATACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCCCGCGAATCTgcg                                >  1:431810/1‑143 (MQ=255)                                                                                                             tttGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATgcg                                >  2:607043/1‑143 (MQ=255)                                                                                                                 atcatcGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGCCGGCATCGCCCTGGAACGACACGCGAATATCCGCAcc                            >  2:29115/1‑143 (MQ=255)                                                                                                                  tggagaaaGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATGTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGCCCTGGACCGTCACGCGAAACGGCGCACCg                           >  2:538051/7‑143 (MQ=255)                                                                                                                  tcatcGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATAGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAAGACGCGCAcgg                           >  1:656051/1‑141 (MQ=255)                                                                                                                  ccatcGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCg                           <  1:66081/142‑1 (MQ=255)                                                                                                                     tcGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCa                        >  1:387163/1‑143 (MQ=255)                                                                                                                       gAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTtgaccgatagcgaaatcgcttcgatgatcaaagactcaatgagctatgccgagcaggacgtaaaagcccgaatgctggcagaacaaaaagtagaa                                 >  2:216805‑M2/1‑37 (MQ=255)                                                                                                                       gAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTtgaccgatagcgaaatcgcttcgatgatcaaagactcaatgagctatgccgagcaggacgtaaaagcccgaatgctggcagaacaaaaagtagaa                                 <  1:216805‑M2/132‑96 (MQ=255)                                                                                                                       gAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGc                      >  2:865610/1‑143 (MQ=255)                                                                                                                        aaGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGcc                     >  2:307405/1‑143 (MQ=255)                                                                                                                        aaGCGATTTCGCTATCGGTCAGACCGGAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGcc                     <  2:295654/143‑1 (MQ=255)                                                                                                                         aGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCg                    <  2:716475/143‑1 (MQ=255)                                                                                                                             aTTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCGGTAg                <  1:603229/143‑1 (MQ=255)                                                                                                                             aTTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCAACGACGTCACTCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCGGTAg                >  1:455517/1‑143 (MQ=255)                                                                                                                                  gCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCGGTAGCGCCg           <  1:307405/143‑1 (MQ=255)                                                                                                                                    tATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCCCCATCGCCGTCACGCTCAAAAGACCGTCGGCCTCGACCTGGAACATCACGCGACTATGCGCACCGCCAGCCGGTAGCGCCGGa         >  2:106774/1‑143 (MQ=255)                                                                                                                                        ggTCAaaccgtcttacggtctgaccgatagcgaaatcgcttcgatgatcaaagactcaatgagctatgccgagcaggacgtaaaagcccgaatgctggcagaacaaaaagtagaagcggcgcgtgtgctggaaagtctgcacg     <  1:435852‑M1/143‑139 (MQ=255)                                                                                                                                        ggTCAaaccgtcttacggtctgaccgatagcgaaatcgcttcgatgatcaaagactcaatgagctatgccgagcaggacgtaaaagcccgaatgctggcagaacaaaaagtagaagcggcgcgtgtgctggaaagtctgcacg     >  1:154137‑M1/1‑5 (MQ=255)                                                                                                                                        ggTCAGACCGTAAGACGGTTtgacaggtcacggcatcgcatctatgagcaaagactcaatgagctatgccgagcaggacgtaaaagcccgaatgctggcagaacaaaaagtagaagcggcgcgtgtgctggaaagtctgcatg     <  1:626432‑M2/143‑124 (MQ=255)                                                                                                                                         gTCAaaccgtcttacggtctgaccgatagcgaaatcgcttcgatgatcaaagactcaatgagctatgccgagcaggacgtacaagcccgaatgctggcagaacaaaaagtagaagcggcgcgtgtgctggaacgtctgcacgg    >  2:91447‑M1/1‑4 (MQ=255)                                                                                                                                         gTCAaaccgtcttacggtctgaccgatagcgaaatcgcttcgatgatcaaagactcaatgagctatgccgagcaggacgtaaaagcccgaatgctggcagaacaaaaagtagaagcggcgcgtgtgctggaaagtctgcacgg    >  1:561564‑M1/1‑4 (MQ=255)                                                                                                                                          tCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCAGTCACGCTCAAAAGACCGTCGGCATCGACATGGAAAGTCACGCGAATATGCGCACGGCCAGCCGGTAGCGCCGGACTACCa   >  1:305005/1‑143 (MQ=255)                                                                                                                                           cAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCGGTAGCGCCGGAATACCAc  <  1:703557/143‑1 (MQ=255)                                                                                                                                            |                                                                                                                                              ATCAGCAGCCAGCGCGCCGTGCAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCGGTAGCGCCGGAATACCAC  >  NC_000913/2657286‑2657566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.