New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2657425	51 (1.110)	3 (0.070)	3/254	NT	5.5%	coding (1511/1851 nt)	hscA	iron‑sulfur cluster biosynthesis chaperone HscA
	?	NC_000913	= 2657440	55 (1.250)					coding (1496/1851 nt)	hscA	iron‑sulfur cluster biosynthesis chaperone HscA

CGCGCCGTGCAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCGGTAGCGCCGGAATACCACGCAGCGCAAAACGC  >  NC_000913/2657298‑2657580                                                                                                                                               |                                                                                                                                             cgcgcCGTGCAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTTTTCTGCCAGCATTCGGGCGTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGtt                                                                                                                                              <  2:415177/143‑1 (MQ=255)     ccGTGCAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTtgac                                                                                                                                          >  1:561564‑M2/1‑139 (MQ=255)     ccGTGCAGACGTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTGTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTtgac                                                                                                                                          >  2:91447‑M2/1‑139 (MQ=255)      cGTGCAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTtgacc                                                                                                                                         >  1:154137‑M2/1‑138 (MQ=255)      cGTGCAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTtgacc                                                                                                                                         <  1:435852‑M2/143‑6 (MQ=255)          cAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACAGTAAGACAGATTAACCCGac                                                                                                                                     >  1:533568/1‑142 (MQ=255)               tttCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTAATTGAGTCTTTGATAATCGAAGCGCTTTCGCTATCGGTCCGACAGGAACACGGTTTTACCTGAATAgcc                                                                                                                                >  2:356243/1‑141 (MQ=255)                 tCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGc                                                                                                                              <  1:53089/143‑1 (MQ=255)                 tCCAGCACACGCGCCGCTTCGACTAGGTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGc                                                                                                                              <  1:233877/143‑1 (MQ=255)                 agcAGCACACGCGCCGCTTCTACTTTCTGTGCTGCCAGCAGGCGGGCTTTTACGTCCTGCTCGGCATAGCTCATGGAGTCTATGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGc                                                                                                                              <  1:227752/141‑1 (MQ=255)                      cacaCGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGAGTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCaa                                                                                                                         <  1:228141/143‑1 (MQ=255)                         acGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATCGACGCCTCACCGc                                                                                                                      >  1:794490/1‑143 (MQ=255)                            cgccgcTTCTACTTTGTGTGCTGCAAGCATTCGGGCATGGACGGCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCgg                                                                                                                   <  1:289046/143‑1 (MQ=255)                              ccgcTTCTACTTTTTGTTCTGCCAGCATTCGGGATTTTACGTTCTGCTCGGCATAGGTCATTGAGCCTTTGATCATCGAAGCGATTTCGGTATGGGTCAGACCGTAAGACGGTTTTACCTGGATACACGCCTCGACGCCGGTg                                                                                                                 >  2:70168/1‑143 (MQ=255)                               cgcTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCCGAATAGACGCCTCAACGCCGGTgg                                                                                                                >  2:256652/1‑143 (MQ=255)                                   tCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGAttt                                                                                                            <  1:797746/143‑1 (MQ=255)                                       cTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTcc                                                                                                        >  1:716475/1‑143 (MQ=255)                                        tttttGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCGACGCCGGTGGATTTCTccc                                                                                                       >  1:728307/1‑142 (MQ=255)                                         ttttGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGCTCATCGCAGCGATTTCGCTATCGGTCAGCCCGTCAGGACCTTTTACCTCAAGCTACGCCTCAACCCCCGCGCATTtctcacc                                                                                                      >  2:410721/1‑140 (MQ=255)                                             gTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGCGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGCCGGTTCGACCTGAATAGACGCCTCAACTCCGGTGGATTTCTCCATCGcc                                                                                                  <  2:552831/143‑1 (MQ=255)                                                cTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGAGTTCTCCATCGCCGTc                                                                                               >  2:847514/1‑143 (MQ=255)                                                   ccAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCCCCGTCACg                                                                                            >  2:567843/1‑143 (MQ=255)                                                     aGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCGTAGAGTGGGTTATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGCTTTCTCCATCGCCGTCACGCt                                                                                          >  1:625948/1‑143 (MQ=255)                                                      gCATTCGGGCTGCTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTc                                                                                         <  1:702382/143‑1 (MQ=255)                                                             ggCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTACATCGCCGTCACGCTCAAAAGAc                                                                                  >  1:535634/1‑143 (MQ=255)                                                              gCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGCCGCCTCGTCGCCGGTGGATTTCTCCATCGCCGTCACGCTAAAAAGAcc                                                                                 >  1:316108/1‑143 (MQ=255)                                                                ttttACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGt                                                                               <  2:161990/143‑1 (MQ=255)                                                                ttttACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGGCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGCTTTCTCCATCGCCGTCACGCTCAAAAGACCGt                                                                               >  2:344001/1‑143 (MQ=255)                                                                 tgtACGTCCGGCTCGGCATAGCTCTTTGAGTCGTTGATCATCGAAGCGATTTCGCGATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTc                                                                              <  2:203437/141‑1 (MQ=255)                                                                       tCCTGCTCGGCATAGCTCATTGAGTCTTTGAACATCGAAGCGATTTAGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGATGGATGTCTTCATCGCCGTCACACTCACAAGACCGTcaccata                                                                        >  2:417648/1‑137 (MQ=255)                                                                                gCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGCTGTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCCACCTGGag                                                               >  2:845640/1‑142 (MQ=255)                                                                                 cagaGCTCATTGAGTCTGTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAAc                                                              <  1:512874/140‑1 (MQ=255)                                                                                    agctgcttGAGTCTTGGATCATCGCAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTc                                                           <  1:184888/137‑1 (MQ=255)                                                                                          ttGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGGCGCGCGa                                                     >  2:870616/1‑143 (MQ=255)                                                                                           tGAGTCTTGGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGaa                                                    <  1:594075/143‑1 (MQ=255)                                                                                             aGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAata                                                  <  1:272803/143‑1 (MQ=255)                                                                                               tCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATg                                                >  2:509277/1‑143 (MQ=255)                                                                                                 tttGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATATACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCCCGCGAATCTgcg                                              >  1:431810/1‑143 (MQ=255)                                                                                                 tttGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATgcg                                              >  2:607043/1‑143 (MQ=255)                                                                                                     atcatcGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGCCGGCATCGCCCTGGAACGACACGCGAATATCCGCAcc                                          >  2:29115/1‑143 (MQ=255)                                                                                                      tggagaaaGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATGTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGCCCTGGACCGTCACGCGAAACGGCGCACCg                                         >  2:538051/7‑143 (MQ=255)                                                                                                      tcatcGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATAGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAAGACGCGCAcgg                                         >  1:656051/1‑141 (MQ=255)                                                                                                      ccatcGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCg                                         <  1:66081/142‑1 (MQ=255)                                                                                                         tcGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCa                                      >  1:387163/1‑143 (MQ=255)                                                                                                           gAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTtgaccgatagcgaaatcgcttcgatgatcaaagactcaatgagctatgccgagcaggacgtaaaagcccgaatgctggcagaacaaaaagtagaa                                               <  1:216805‑M2/132‑96 (MQ=255)                                                                                                           gAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTtgaccgatagcgaaatcgcttcgatgatcaaagactcaatgagctatgccgagcaggacgtaaaagcccgaatgctggcagaacaaaaagtagaa                                               >  2:216805‑M2/1‑37 (MQ=255)                                                                                                           gAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGc                                    >  2:865610/1‑143 (MQ=255)                                                                                                            aaGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGcc                                   >  2:307405/1‑143 (MQ=255)                                                                                                            aaGCGATTTCGCTATCGGTCAGACCGGAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGcc                                   <  2:295654/143‑1 (MQ=255)                                                                                                             aGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCg                                  <  2:716475/143‑1 (MQ=255)                                                                                                                 aTTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCGGTAg                              <  1:603229/143‑1 (MQ=255)                                                                                                                 aTTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCAACGACGTCACTCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCGGTAg                              >  1:455517/1‑143 (MQ=255)                                                                                                                      gCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCGGTAGCGCCg                         <  1:307405/143‑1 (MQ=255)                                                                                                                        tATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCCCCATCGCCGTCACGCTCAAAAGACCGTCGGCCTCGACCTGGAACATCACGCGACTATGCGCACCGCCAGCCGGTAGCGCCGGa                       >  2:106774/1‑143 (MQ=255)                                                                                                                            ggTCAGACCGTAAGACGGTTtgacaggtcacggcatcgcatctatgagcaaagactcaatgagctatgccgagcaggacgtaaaagcccgaatgctggcagaacaaaaagtagaagcggcgcgtgtgctggaaagtctgcatg                   <  1:626432‑M2/143‑124 (MQ=255)                                                                                                                              tCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCAGTCACGCTCAAAAGACCGTCGGCATCGACATGGAAAGTCACGCGAATATGCGCACGGCCAGCCGGTAGCGCCGGACTACCa                 >  1:305005/1‑143 (MQ=255)                                                                                                                               cAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCGGTAGCGCCGGAATACCAc                <  1:703557/143‑1 (MQ=255)                                                                                                                                 gACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCGGTAGCGCCGGAATACCACGc              <  1:739588/143‑1 (MQ=255)                                                                                                                                  aCCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCGGTCACGCCGGAATACCACGCa             >  2:112739/1‑143 (MQ=255)                                                                                                                                   gcGTAAGACGGTTGGACCTGAAGAGACGCCTCAACGCCGGGGGATTCCACCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCGGTAGCGCCGGAATACCACGCAg            <  1:518793/142‑1 (MQ=255)                                                                                                                                   ccGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGACAGCCGGTAGCGCCGGAATACCACGCAg            >  2:415217/1‑143 (MQ=255)                                                                                                                                    cGTCAGACGGTGTGACGTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCGGTAGCGCCGGAATACCACGCAgc           <  2:293051/143‑1 (MQ=255)                                                                                                                                      tAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGCGGGCATCGACGTGGAACGTCACGCGAATAGGCGGACCGCCAGCCGGTAGCGCCGGGATAGCGCGCAgggc         >  1:295800/1‑143 (MQ=255)                                                                                                                                          aCGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGCCCCGGAACGTCACGCGAATATGCGCACCGCCAGCCGGTAGCGCCGGAATACCACGCAGCGCacaa     >  2:362165/1‑143 (MQ=255)                                                                                                                                             gTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCGGACGCGCCGGAACACCACGCCGCGCAAAAcgc  >  2:828074/1‑143 (MQ=255)                                                                                                                                               |                                                                                                                                             CGCGCCGTGCAGACTTTCCAGCACACGCGCCGCTTCTACTTTTTGTTCTGCCAGCATTCGGGCTTTTACGTCCTGCTCGGCATAGCTCATTGAGTCTTTGATCATCGAAGCGATTTCGCTATCGGTCAGACCGTAAGACGGTTTGACCTGAATAGACGCCTCAACGCCGGTGGATTTCTCCATCGCCGTCACGCTCAAAAGACCGTCGGCATCGACCTGGAACGTCACGCGAATATGCGCACCGCCAGCCGGTAGCGCCGGAATACCACGCAGCGCAAAACGC  >  NC_000913/2657298‑2657580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.