New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2726026 =	51 (1.110)	4 (0.090)	4/264	NT	7.3%	intergenic (‑280/+43)	kgtP/rrfG	alpha‑ketoglutarate:H(+) symporter/5S ribosomal RNA
	?	NC_000913	3423662 =	NA (NA)					intergenic (‑7/+6)	thrV/rrfD	tRNA‑Thr/5S ribosomal RNA

TGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCAC  >  NC_000913/2725885‑2726168                                                                                                                                              |                                                                                                                                                tGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAAt                                                                                                                                                >  2:635114/1‑143 (MQ=255)  gataaaacagaatttgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaattATg                                                                                                                                               <  1:744667‑M1/3‑1 (MQ=255)  gataaaacagaaggtgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaattATg                                                                                                                                               >  2:541773‑M1/141‑143 (MQ=255)   ataaaacagaatttgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaggtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcagcaaattATGc                                                                                                                                              <  1:7197‑M1/4‑1 (MQ=255)   aggagCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGc                                                                                                                                              >  2:575323/1‑143 (MQ=255)    ggagCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCCCAGCGTCGCATCAGGCATTTTTTTCTGCCCCAATGCa                                                                                                                                             >  1:824239/1‑143 (MQ=255)        cctAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCaaaaa                                                                                                                                         <  1:512201/141‑1 (MQ=255)         ttAAGGATCAATTTGTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTGGGGGAAGCCGTATCCGTTGCTGAATCTGGTATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAg                                                                                                                                        <  2:97590/143‑1 (MQ=255)            aGGAGAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGcc                                                                                                                                     <  1:142478/143‑1 (MQ=255)                    ttttTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCa                                                                                                                             <  1:434927/143‑1 (MQ=255)                       cgcgtcaggaggACACGTACGCGAGTGGCGTGGTGGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCCTCCGTCA‑GGa                                                                                                                         <  2:492175/137‑1 (MQ=25)                       cTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGa                                                                                                                         <  1:894377/143‑1 (MQ=255)                         ggTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATg                                                                                                                       <  2:188912/143‑1 (MQ=255)                          gcgtggcgcggtggccccacctgcgccctggccgatgtcagaggtgaaacgcggtagcgccgatggtagtgtggggtctccccatgcgagagtggggaactgccaggcatcaaattATGCGAAA‑GGCCATCCGTCA‑GGATGGc                                                                                                                     >  2:666660‑M1/117‑143 (MQ=255)                          gTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATATGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAGAGGCCATCCGTCC‑GGATgg                                                                                                                      >  2:507485/1‑143 (MQ=255)                          gTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATgg                                                                                                                      >  1:630183/1‑143 (MQ=255)                             aggaggACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCACAAAGGCGATCCGTAA‑GGCTTGcca                                                                                                                   >  2:586600/1‑142 (MQ=38)                               gaggaCACGTATGGGAGTGGGCAAGGTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCttt                                                                                                                 <  2:39559/143‑1 (MQ=255)                                 ggaCACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCC‑TGACGGATGGCCttttt                                                                                                               <  2:505042/143‑3 (MQ=37)                                  gaCACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGc                                                                                                              >  1:633410/1‑143 (MQ=255)                                   ggtggtcccacctgaccccgtgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaattATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCa                                                                                                             >  2:661587‑M1/108‑143 (MQ=255)                                      ggtcccacctgaccccatgccgaactcagaagtgaaacgctgtggcgtcgagggtagtgtggggtcttcccatgcgagagtagggaactgccaggcatcaaattATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATaa                                                                                                          >  1:711728‑M1/105‑143 (MQ=255)                                         aTGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAGCGCCATCACTCA‑AGATGGCCTTTCGCCTAAttt                                                                                                       >  2:390384/1‑143 (MQ=37)                                         aTGGAAGGGGGCAAGTTGGGGAAGCCGTATCCGTTCATGTATGGTGCATTTGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAAttt                                                                                                       <  2:641713/143‑1 (MQ=21)                                            acctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaattATGCGAAA‑GGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATg                                                                                                   >  1:376361‑M1/99‑143 (MQ=255)                                              aGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGc                                                                                                  <  1:575323/143‑1 (MQ=255)                                                  ggCAAGTTGGGGCAGCCGTCTCCGTTGCTGAATCTGGCATACGTGGGAGCATAAGACGCGCAGCGTCGCCTCAGGCCTCTTTCTCTGCGCCAACGCAAACCGCCCATCCCCCC‑CCATGGCCTTTCGCATCATCTGATGccccc                                                                                              >  2:88605/1‑140 (MQ=255)                                                  ggCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATAAGGCACGCTTGTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTgg                                                                                              >  1:209268/1‑143 (MQ=37)                                                        ttGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCACTGCAACAAGGCCATCCGTCA‑GGATGGCCTTTCGCATGATTTGATGCCTGGCAGTTc                                                                                        >  1:509554/1‑143 (MQ=255)                                                         tGGGGAAGCCGTGTCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGCTGGCCTTTCGCATAATTTGATGCCTGGCAGTTcc                                                                                       <  2:169388/143‑1 (MQ=255)                                                         tGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTcc                                                                                       <  1:514859/143‑1 (MQ=255)                                                                gCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTActct                                                                                <  1:781128/143‑1 (MQ=255)                                                                   gtctCCGTGGCTGTCTCTGGCATATGTGGGCGTGTGCCCCGTGCAGCGTCGCATCGGGCATTTTTTTCTGCGCCAATGCAAACAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGc                                                                             <  2:400380/140‑1 (MQ=17)                                                                     aTCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCAt                                                                           <  1:635114/143‑1 (MQ=255)                                                                      tCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCCATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGACTGGCTGCTCCCTCCtctcccctg                                                                          >  1:857224/1‑138 (MQ=21)                                                                        cGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATggg                                                                        <  2:486220/143‑1 (MQ=255)                                                                        cGTGGCTGAACCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATggg                                                                        <  1:536940/143‑1 (MQ=255)                                                                         gTTGCTGAATCTGGCATATGTGGGAGTATAGGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATgggg                                                                       <  2:466966/143‑1 (MQ=255)                                                                               cactcgggCATATGTGGGATTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTGCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGAccc                                                                 <  2:806550/137‑1 (MQ=255)                                                                                 aTCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCGATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCca                                                               <  2:268036/143‑1 (MQ=255)                                                                                  tCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATggg                                                                        >  1:319227/1‑133 (MQ=255)                                                                                  tCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATggg                                                                        <  2:319227/133‑1 (MQ=255)                                                                                   cTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACcacaca                                                             >  1:14991/1‑143 (MQ=255)                                                                                    tGGCATATGTGGTAGTATAAGACGCGCCGCGTCGCATCAGGCCTTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCacac                                                            <  2:88878/143‑1 (MQ=255)                                                                                        atatGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTAcc                                                        <  1:804036/143‑1 (MQ=255)                                                                                               ggAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGgcg                                                 >  1:153817/1‑143 (MQ=255)                                                                                                gAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGCCCCCACACTACCATCGgcgc                                                >  1:249428/1‑143 (MQ=255)                                                                                                 aGTATAAGACGCGCGGCGTCGCATCAGGCATTTTGTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCt                                               <  2:834171/143‑1 (MQ=255)                                                                                                 aGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCt                                               >  1:755355/1‑143 (MQ=255)                                                                                                       aGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAACAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCACTGATCGCGCATGGGGAGCCCCCACACGACGATAGGCGCTAcctag                                         >  2:253756/1‑139 (MQ=18)                                                                                                       aGACGCGCAGCGTCGAATAAGGCATTTTTTTCTGCGCCAATGCAAAACGGCCATACGTCA‑GTCTGGCCTTCCGCCTAAGTTGATGCCTGGCAGTTCCCTACGCGCCCCTGGCGACAACCCCCACGCTCATCGgcgcgccgacg                                         >  2:724647/1‑136 (MQ=9)                                                                                                           gcgcAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTc                                     >  1:167600/1‑143 (MQ=255)                                                                                                                       aTCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACCGCGTCTCACTTccgcgctc                         >  2:882608/1‑136 (MQ=255)                                                                                                                        tCAGGCATTTTTTTCTGCGCCAATGCACAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATCCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGATCg                        >  1:399068/1‑143 (MQ=255)                                                                                                                             cATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACCCTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCCTg                   >  2:276862/1‑143 (MQ=255)                                                                                                                             cATTTTTTTCTGAGTCAATGCAAAAAGGCCATTCGTCA‑GGATGGCTTTTCTCATAATTTGATGCCTGTCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATg                   <  2:702828/143‑1 (MQ=18)                                                                                                                              atgtttttCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCGTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgg                  <  1:648133/140‑1 (MQ=255)                                                                                                                                ttttttCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgggg                >  1:680522/1‑143 (MQ=255)                                                                                                                                   tttCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGCTCa             >  1:578148/1‑143 (MQ=255)                                                                                                                                      cTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGt          <  1:299028/143‑1 (MQ=255)                                                                                                                                      cTGCGCCAATGCAAAAAGGACATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTGTTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTTACTTCTGAGTTCGGCATGGGGTCAGGt          <  1:507485/143‑1 (MQ=255)                                                                                                                                           ccAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGac     <  1:109034/143‑1 (MQ=255)                                                                                                                                            cAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCAAGGAAATCAGGCTTACAACAATCCGCGCTACGGCGTCTCACTCCTGAGTTCGGCACGGGATCACGTGGGccc    >  2:684184/1‑143 (MQ=16)                                                                                                                                              aTGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCCTGGGGAGACCCCCCACTACCATCGGCGCTACGGCGTTTCCCTTCTGAGTTCGACATTGGATCAGGTGGGaccac  >  1:73729/1‑143 (MQ=18)                                                                                                                                              |                                                                                                                                                TGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCAC  >  NC_000913/2725885‑2726168

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.