New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4094358 =	NA (NA)	3 (0.070)	3/250	NT	NA	noncoding (1/36 nt)	other	REP299b
	?	NC_000913	4094572 =	NA (NA)					noncoding (31/36 nt)	other	REP299f

GTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGAC  >  NC_000913/4094216‑4094497                                                                                                                                               |                                                                                                                                            gatgcggcgcgagcgccttatccggcctacgggtcggcaacagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgattgccggatgcggcacaagtgccttatccggcctacaggtcggcaacagttgtaggc                                                                                                                                             <  1:191017‑M1/1‑1 (MQ=255)  tCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGCTAAGGCGCTCGCGCCGCATCCGGCAATCAATGcc                                                                                                                                            >  1:36878/1‑143 (MQ=255)   tgcggcgccatcgccttctccggcctccgggtcggcaacagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgattgccggatgcggcacaagtgccttatccggcctacaggtcggcaatagttgtaggCCt                                                                                                                                           >  1:317025‑M1/141‑143 (MQ=255)      ggcgcgagcgccttatccggcctacgggtcggcaacagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgattgccggctgcggcccacgtgccttatccggcctacatgtcggccataattgtaggCCAGAt                                                                                                                                        <  1:52280‑M1/6‑1 (MQ=255)        gtggCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGCCCCGTCGGCCGGGTAAGGCGCTCGCGCCGCACCCGGCACTCAATGCCtcgcgc                                                                                                                                      >  2:705324/1‑138 (MQ=255)         tggCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCg                                                                                                                                     >  1:12737/1‑143 (MQ=255)               tGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCACTGCCTGACGCGACGCTg                                                                                                                               >  2:776203/1‑143 (MQ=255)                 ttctgtCCCTGGGCAGACCGGGACTGAGTACTGTGTTGGATGTTGTGTGTTCGTGTAGATGCGGTGTTGCCGGATGCACGCCCCGGAGGGCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTc                                                                                                                             <  2:552402/138‑1 (MQ=21)                 aTCATTCCCTGCACAAACCAGGACTGAGTAATGTTCTGCATGTTCTGTGTTCCTGTAAATGCGGCGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTc                                                                                                                             <  1:310531/143‑1 (MQ=255)                  tCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTcg                                                                                                                            >  2:906295/1‑143 (MQ=255)                   cctacgcTGGGCAAACCGGGAGGGAGGAATGTTTTGCATGTTCTGTGTTCCTGTCAATTCGGTGTTGTCGGATGCACGGCACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTcgc                                                                                                                           <  2:383597/137‑1 (MQ=25)                     ttCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGGGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGt                                                                                                                         <  2:177684/143‑1 (MQ=255)                         cTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGCCGCTGTCGCGTCTTa                                                                                                                     >  2:849640/1‑143 (MQ=255)                          tGGACAAACCAGGACTGAGTAATGTTTTGCATCTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTAt                                                                                                                    >  2:476104/1‑143 (MQ=255)                            gACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAAGCAAAGCCGGATGCGACGCTGTCGCGTCTTATCa                                                                                                                  >  1:164761/1‑143 (MQ=255)                            gACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCAGCCGGCAATCAATGCCTGATGCGGCGCGGTCGCGTCCTGTCa                                                                                                                  >  1:129998/1‑143 (MQ=38)                             acgggtcggcaacagttgggggcctgataagacgcgacagcgtcgcatcaggcattgattgccggatgcggcacaagtgccttatccggcctacaggtcggcaatagttgtaggCCTGATAAGACGCTGTCGCGTCTTATCAg                                                                                                                 >  2:116874‑M1/115‑143 (MQ=255)                             acaggccAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCGGTAAATTTGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAg                                                                                                                 <  2:611850/138‑1 (MQ=255)                                 aCCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATACGAAGCTGTCGCGTGTTCTCAAGcgc                                                                                                             >  2:52280/1‑141 (MQ=37)                                   cAGGAGTGCGTAATGTTTTGCATGTTCTGTGTTACTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGACGGATAAGGCGCTCGCGCCGCATACGGCAATCAATGCCTGATGCGACGGTGTCGCGTCTTATTAGGCCTAc                                                                                                           >  2:20456/1‑143 (MQ=25)                                     ggACTGAGTAATGTTTTGGATGTTGTGGGTGCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACaa                                                                                                         <  1:848451/143‑1 (MQ=255)                                     ggACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATGCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACaa                                                                                                         <  2:247810/143‑1 (MQ=255)                                      gACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCtgcgac                                                                                                        >  1:783773/1‑138 (MQ=255)                                       acggAGTAATGTTTTGCATGTTGTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACt                                                                                                       <  2:281692/140‑1 (MQ=255)                                         tGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCGTACCCGGCCTACAACTAt                                                                                                     >  2:291955/1‑143 (MQ=255)                                          gAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTAtt                                                                                                    <  1:694596/143‑1 (MQ=255)                                            gTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCAAGAACACAAAGTGTTTTTAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGc                                                                                                  <  1:207263/143‑1 (MQ=18)                                             tAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCCTCCGGCAATCAATGCCTGCTGGGAAGTAGGTGCGTCGTATCCGGCCTACAACTATTGcc                                                                                                 >  1:164727/1‑143 (MQ=37)                                               ttGTTTGGCAGGTTCGGGGGTCCGGTAATTGCGGTGTTGTCGGAGGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGa                                                                                               <  2:281510/142‑1 (MQ=17)                                                  ttttGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGTTAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGCCCt                                                                                            >  1:382046/1‑143 (MQ=255)                                                  ttttGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGGTGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGCCCt                                                                                            >  1:227614/1‑143 (MQ=255)                                                  ttttGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCt                                                                                            >  2:235031/1‑143 (MQ=255)                                                    ttGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGt                                                                                          >  2:763370/1‑143 (MQ=255)                                                       cATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAgg                                                                                       >  1:656114/1‑143 (MQ=255)                                                            tCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCGTCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTgg                                                                                  >  1:391248/1‑142 (MQ=255)                                                              tgtgTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATa                                                                                >  1:110988/1‑143 (MQ=255)                                                              tgtgTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATa                                                                                >  2:46340/1‑143 (MQ=255)                                                               gtgtTCCTGTAAATTCGGTGTTGTGGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATaa                                                                               <  2:866773/143‑1 (MQ=255)                                                                     cTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACt                                                                         >  1:189155/1‑143 (MQ=255)                                                                      tGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCCCGTCTTATCAGCCCTACAAATATTGCCGACATATAGGCCTGATAAGGCACtt                                                                        >  1:751789/1‑143 (MQ=21)                                                                      tGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCAGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTATTATCAAGCCTACAACTATGGACAACCAGTAGGCCAAGTAAAGCACta                                                                        >  2:41894/1‑142 (MQ=18)                                                                        tAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACGAGTGCCGACCTGTAGGCCGGATCAGGCACTggt                                                                      >  2:216857/1‑143 (MQ=18)                                                                         gcatcaggcattgattgccggatgcggcacaagtgccttatccggcctacaggtcggcaatagttgtaggCCTGAt                                                                                                                                        <  1:415448‑M1/6‑1 (MQ=255)                                                                         aatttCGGTGTTGACGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTtgtg                                                                     <  1:256558/140‑1 (MQ=255)                                                                            ttCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGCCCTGCAGGCCTGATAAGGCACTtggcccg                                                                  >  2:559008/1‑138 (MQ=255)                                                                                gtgcTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATc                                                              <  2:655014/143‑1 (MQ=255)                                                                                      tCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGcaa                                                        >  1:289715/1‑143 (MQ=255)                                                                                      tCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGcaa                                                        >  1:299936/1‑143 (MQ=255)                                                                                       cctctGCACGACGTGGAGGCCGGATAAGGCGCTTGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaat                                                       <  2:669473/139‑1 (MQ=1)                                                                                         ggtGCCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaatca                                                     <  1:288241/141‑1 (MQ=255)                                                                                           tGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGcaatcaat                                                   <  2:656114/143‑1 (MQ=255)                                                                                             cACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGc                                                 <  2:36878/143‑1 (MQ=255)                                                                                              aCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGCTAAGGCCCTTGTGCCGCATCCGGCAATCAATGcc                                                >  1:54252/1‑143 (MQ=255)                                                                                              aCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCACTGca                                                >  1:896940/1‑142 (MQ=255)                                                                                                gACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCACTGCCTg                                              >  1:571473/1‑143 (MQ=255)                                                                                                    tgTAGGGCGGAGAGGGGGCGCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCGTATCAGGCCTATAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGc                                          <  2:47170/142‑1 (MQ=11)                                                                                                    cGTAGGCCGGAGACGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGGTGCGGCGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGc                                          <  2:727477/143‑1 (MQ=255)                                                                                                     gtggcccGGAGAAGCCGCTCGCGCCGTCGCCGGCAATCAATGCCTGATGCGACGCGGTCGCGTCTTATCGGGTCGACACCTATTGCAGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCg                                         <  2:366127/138‑1 (MQ=11)                                                                                                      tAGGCCGGGCACGGCGCTCCGCCCGCTTCCGGGAATCATGGCCCGTTGCGTCGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGTCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGa                                        <  2:902913/143‑1 (MQ=11)                                                                                                          ccGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTAGTGCCGACCTGTAGGCCTGATAAGGCACTAGTGCCGCATCCTGCAATCAACTCCTGAAGCGgcgca                                    >  2:275267/1‑142 (MQ=14)                                                                                                            ggagcaGGCGCCCGCGCCGCACCCGGCAATCAATGCCTGAGGCGACGCTGTCGCGTCTGATCAGGCCTACACCTATGGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGt                                  <  2:334994/138‑1 (MQ=11)                                                                                                            ggATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGCCCTGTCGGCCTGATAAGGCACTTGTGCCGCATCCAGCAATCAAAACCTAATACAACGATGt                                  >  1:473940/1‑143 (MQ=14)                                                                                                            ggATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCACCCGGCAATCAATGCCTGATGCGACGcaaa                                  >  1:702401/1‑140 (MQ=255)                                                                                                             gATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTc                                 <  2:12737/143‑1 (MQ=40)                                                                                                              ttatcaggcctacaggtcggcaatagttgtaggCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATaa                                                                               <  2:14195‑M1/63‑1 (MQ=255)                                                                                                              ttatcaggcctacaggtcggcaatagttgtaggCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATaa                                                                               >  1:14195‑M1/34‑96 (MQ=255)                                                                                                                  ggCGCTCGCGCCGCATCCGTCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGAATCCGGCAAGCAAAGCCTCACTCGCGCCTGTCGCGTc                            >  2:679018/1‑143 (MQ=14)                                                                                                                    cgcTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCtt                          >  1:85998/1‑143 (MQ=38)                                                                                                                     gcTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTTGGCCTGATAAGGCACTTGTGACGCATGAGGCAATCAATGCATGATGCGACGCTGTCGAGTCTTa                         >  1:609873/1‑143 (MQ=11)                                                                                                                      cTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTg                                                                                                                               >  2:892738/1‑40 (MQ=255)                                                                                                                      cTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTg                                                                                                                               <  1:892738/40‑1 (MQ=255)                                                                                                                         gcgcCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAg                     >  1:496840/1‑143 (MQ=33)                                                                                                                           gccgcACCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGc                   >  2:36563/1‑143 (MQ=17)                                                                                                                                 tcaggCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGCTAGGGGACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACaa             <  1:819173/140‑1 (MQ=255)                                                                                                                                  ccggcaatgcaggCCGGCTGCGGCGCTGTCGCGTCGTCGCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCACCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAc            >  1:245756‑M1/14‑143 (MQ=255)                                                                                                                                   cGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCGCTTGCGCCGCATCCGGCAGTGAATGCCTGCTGCGACGCTCTCGCGCATTCTCAGGcccccaccc           >  2:597876/1‑136 (MQ=11)                                                                                                                                   cGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACt           >  1:791921/1‑143 (MQ=32)                                                                                                                                    ggCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTAACAGGGCTACAAcgg          >  2:632056/1‑141 (MQ=12)                                                                                                                                     gcaatgaaggCCTGAGGCGAGGCTGTCGCGGCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGACACTTGTGCCGCATCCGGCAATCAATGCCTGATGCTACGCTGTCGCGTCTTATCAGGCCTACAACTGt         >  1:717270‑M1/11‑143 (MQ=255)                                                                                                                                      caatcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGtt        <  1:235031/143‑1 (MQ=32)                                                                                                                                         tccctGCCTGATGCCACGCTGTCTCGTCTTATCAGGCCTCCACCGATTGCCGACCTGTAGGCCTGATAAGGCACTCGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGcc     <  2:915655/139‑1 (MQ=11)                                                                                                                                          caatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCGTGATAAGGCAGTTGTGGCGCGTCCGGGCATCAATGCGTGATGCGACGCTGTCGCGTGTTATCAGGCCTACAACTGTTGCCg    >  1:366473/1‑143 (MQ=11)                                                                                                                                            atGCCGGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGAc  <  1:429792/143‑1 (MQ=17)                                                                                                                                               |                                                                                                                                            GTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGAC  >  NC_000913/4094216‑4094497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.