| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4094358 = | NA (NA) | 3 (0.070) | 3/250 | NT | NA | noncoding (1/36 nt) | other | REP299b |
| ? | NC_000913 | 4094572 = | NA (NA) | noncoding (31/36 nt) | other | REP299f | |||||
CATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCC > NC_000913/4094434‑4094714 | ctcccGGCAATCAATCCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTAc < 2:189155/140‑1 (MQ=17) cccGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACaa < 1:36563/142‑1 (MQ=17) ggCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTa > 2:470792/1‑143 (MQ=33) acagttgtaggcctgataagacgcgacagcgtagcatcaggcattgattgccggatgcggcacaagtgtcttatcaggcctacaggtcggcaatagttgtaggcctgataagccgcgacagcctcgcctcaggCcttcattgc > 1:717270‑M2/134‑139 (MQ=255) gCAACCAAGGCCTGGTGGGGCGGTGGCGCGTCTTAGCAGGCCGACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTAt < 1:857228/143‑1 (MQ=11) gttgtaggcctgataagacgcgacagcgtcgcatcaggcattgattgccgggtgcggcacaagtgccttatcaggcctacaggtcggcaatagttgtaggcctgcgacgacgcgacagcgccgcagccggcctgcattgccgg > 1:245756‑M2/131‑136 (MQ=255) cTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCTTACAACTATTGCCGACCTGt > 2:509433/1‑143 (MQ=38) tGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCCGTAGGc > 1:777634/1‑143 (MQ=17) cTGTCGCGTCTGATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATaa < 1:849640/143‑1 (MQ=38) tCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTtg > 1:439382/1‑143 (MQ=38) ttATCAGGCCTACATCTGTTGCCGACCCGCAAGTAGGCTTCTTCACATGCGCCGCATGCGGCAATCCACGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTtgtg < 1:660279/143‑1 (MQ=11) agcgggCCTAGAACGGTCGCCATCCTGTAGGCGGTATAAGGCGGGTGGGCCGGATCGGGTATTCAGGGGCTGATGCGACGCTGTGGCGTCTTATGAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGcc < 2:12988/139‑1 (MQ=2) cacgCCTACAACTGTGGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGc < 1:851334/140‑1 (MQ=255) tACAACTGTTTCAGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTTGCGTATTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCgg < 1:341361/143‑1 (MQ=255) aCAACGGTCGGCGACCTGTAGGCCGGATAACGCACTGGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATGCGGCACAACTGCCTTATCCGGc < 2:896940/143‑1 (MQ=11) aaCTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaa > 2:521503/1‑143 (MQ=38) actggcgCCCACCTGTGGGCCGGAGAAGGCTCGTGGGCCGCGTCCGGCAATCAATGCCTGATGCGACGCTGCCGCGTCTGAGCAGGCCTACAACTCTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaat < 2:117330/137‑1 (MQ=11) tGTTGCCGACCTGTAGGCCGGATAAGTCACTTGTGTCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaatca < 1:597880/143‑1 (MQ=25) ccGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGccattgatcca > 2:130158/1‑136 (MQ=255) aCCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACCTGTGCCGCATCCGGCAATAGATGcccgg > 1:589778/1‑140 (MQ=255) ccTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGAt < 1:216857/143‑1 (MQ=35) ccTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGAt < 2:164727/143‑1 (MQ=34) cTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCGCGTATGCCGCATCCGCCCCTCAACCCCTGATg > 1:881607/1‑143 (MQ=11) tGTAGGCCGGATAAGGCACTTGTGCCGCCACAGGAATAGAAAGCCTTATGCGACGCTGTCGCGTCTTAGCAGGACGACAACTATGTCCGACCCGGAGGCCCGACAAGGCACTCGGGCCGCATCCGGCAATCACTGcccccggc > 2:445321/1‑137 (MQ=2) tAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGCTGCGa > 1:580083/1‑143 (MQ=25) gATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTc > 1:740707/1‑143 (MQ=32) ttatcaggcctacaggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggCCTACAACTATTGCCGACCTGTAGGCCTGATaa < 2:14195‑M2/33‑1 (MQ=255) ttatcaggcctacaggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggCCTACAACTATTGCCGACCTGTAGGCCTGATaa > 1:14195‑M2/64‑96 (MQ=255) tAAGGCACTCGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTcgc < 2:224363/143‑1 (MQ=17) aGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGt < 1:763370/143‑1 (MQ=32) aCTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCGGGCGCGTCTTa > 1:222269/1‑143 (MQ=17) gCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCTTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGc < 1:509433/143‑1 (MQ=17) gCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGc < 1:291955/143‑1 (MQ=32) ccctCCGACAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCATACACCTATCACCGGCTTGTCGGCCGGATAAGGCACTTGTACCGCATACAGCACTCTTAGTATGCTGCGACGCTGTCGCGTCTTATCAGGCCTa < 2:366473/140‑1 (MQ=2) cATCCGTCAATAAATGCTTGTTTCGCCGCCGTTCCGTCTTATCAGGCCTACACCTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTAc < 2:472255/143‑1 (MQ=11) tCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACac > 1:267517/1‑142 (MQ=17) cGGCAAGCACTGCCTGCTGCGACGCTGTCGCGTCTTATCAGGCCTACCACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACt < 2:129998/143‑1 (MQ=255) gcatGATACGACGCAGTAGCGCCTTAACAGGCCGAAAACTAGCCCCGACCAGAAGGCCGGATAAGGCACTTGTGCCGCCTCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGAccc < 1:20456/140‑1 (MQ=11) ctgataagacgcgacagcgtcttatcaggCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCCCCAACTGTTGCCGACCCGt > 2:116874‑M2/30‑143 (MQ=255) gATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGACTCTTATCATGACTCCAACCGTTGCCGAcccagag > 2:910518/1‑139 (MQ=11) tGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGc < 2:85998/143‑1 (MQ=35) cGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGt < 1:706601/106‑1 (MQ=33) cTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGTCGGATaa < 2:740707/143‑1 (MQ=25) cTGTCGCGTCTTATCAGGCCTACAACTAGTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATaa < 2:496840/143‑1 (MQ=21) tGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTCCAACTGTTTCCGACCCGTAAGCCGGATaaa > 1:463859/1‑142 (MQ=255) tGTCGCGTCTTATCAGGCCTACAACTATTGCAGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGACGACACGTAGGCCCGacacg > 2:775109/1‑139 (MQ=11) gcgTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCCGATAAGgcgc > 1:550215/1‑143 (MQ=38) atctggCCTACAATTATGGCCGACATGTAGGCCGGATAAGGCACGTGGGCCGCAGCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGcgcc < 1:52280‑M2/137‑1 (MQ=255) atcaggCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGc < 1:415448‑M2/70‑1 (MQ=255) aTCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACCGTTGCCGCCCCGTCGGCCGGATAAGGCGCGCGcccc > 2:222160/1‑143 (MQ=11) aggCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGGAGGCCGGAGAAGGCGATGGCGCCGCa > 1:317025‑M2/4‑143 (MQ=255) aGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGCTAAGGCGCTCGTGCCCCa > 2:556828/1‑143 (MQ=255) gCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATc < 1:191017‑M2/142‑1 (MQ=255) ccTACAACTATTGCCGACCTGTAGGCCGGATAAGGCGCTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTGATCAGGCCTACACCTGTGGCCCCCCCGTCAGCCGGACAAGGCGCTCGCGCCGCAccc > 2:446187/1‑143 (MQ=14) | CATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCC > NC_000913/4094434‑4094714 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |