New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 4559341 = | 51 (1.110) | 4 (0.090) | 3/248 | NT | 7.9% | coding (186/1173 nt) | iadA | isoaspartyl dipeptidase |
? | NC_000913 | 4559360 = | 46 (1.070) | coding (167/1173 nt) | iadA | isoaspartyl dipeptidase |
AGATAGAGTCGGTGCCCAGCAGACCAACCACTGACGTGACGCCCGCTTCCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAATTTTGCCGTTAGCGACGAGGACATCGCAAATTCCCCGATCTTCCGGCGCATACAAATGCG > NC_000913/4559199‑4559483 | ggttcgagTCTGTGCTCAGCAGACCAACCACTGACGTGACGCCCGCTTCCTTAATGTGACTTAGCGCCACTTCCGGCGTGCGCGTCGTAGGACCTGCTTCGCCTCCCCCGTCAATCAAATGGACGTGTTGATCAATAAAACCt < 2:775895/138‑1 (MQ=255) aTAGAGTCGGTGCCCAGCAGACCAACCACTGACGTGACGCCCGCTTCCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCAGCGCGAATGAAATGGAGGTGTGGAGCGATAAAGCGTgg > 1:21062/1‑143 (MQ=255) tAGAGTCGGTGCCCAGCAGACCAACCACTGACGTGACGCCCGCTTCCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTggg < 1:111465/143‑1 (MQ=255) cctgctgcagggagcgcatttgtatgcgccggaagatcggggaatttgcgatgtcctcgtcgctaacggcaaaattatcgccgttgccagcaatatcccttctgacattgtaccgaactgcacggttgtcgatctcagTGGGc > 1:862837‑M1/139‑143 (MQ=255) cctgctgcagggagcgcatttgtatgcgccggaagatcggggaatttgcgatgtcctcgtcgctaacggcaaaattatcgccgttgccagcaatatcccttatgccaccttatctaactgcacggttgtcgatctcagAGGGc < 2:185905‑M1/5‑1 (MQ=255) gctgcagggagcgcatttgtatgcgccggaagatcggggaatttgcgatgtcctcgtcgctaacggcaaaattatcgccgttgccagcaatatcccttctgacattgtaccgaactgcacggttgtcgatctcagTGGGCaga > 1:554021‑M1/136‑143 (MQ=255) tCGGCGCCCAGCAGACCAACCTCTGACGTGACGCCCGCTTCCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTTTGCagag < 2:558626/143‑1 (MQ=255) ctgcagggagcgcatttgtatgcgccggaagatcggggaatttgcgatgtcctcgtcgctaacggcaaaattatcgccgttgccagcaatatcccttctgaccttgtaccgaactgcacggctgtcgctctcagTGGgcagct < 1:228614‑M1/9‑3 (MQ=255) gTGCCCAGGAGACCAACCACTGACGTGACGGCCGCGTCCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGAt < 2:620642/143‑1 (MQ=255) gCCCAGCAGACCAACCACTGACGTGACGCCCGCTTCCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCTATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCt > 1:315414/1‑143 (MQ=255) cagcagACCAACCCCTGACGTGACGCCCGCTTCCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGGCCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGcc < 2:211332/143‑1 (MQ=255) agcagACCAACCACTGACGTGACGCCCGCTTCCGTCAGGCGCCTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGCTCTGccc > 1:200299/1‑143 (MQ=255) agcagACCAACCACTGACGTGACGCCCGCTTCCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCCCCGCCAATCAAATGGACGTGTTGATCCATAAAACCTGGGCAGAGGAGCTGccc > 2:228614/1‑143 (MQ=255) cgcatttgtatgcgccggaagatcggggaatttgcgatgtcctcgtcgctaacggcaaaattatcgccgttgccagcactatcccttctgacattgtaccgaactgcacggttgtcgatctcagTGGGCAGAGGATCTGCCCa > 2:14349‑M1/125‑143 (MQ=255) cgcatttgtatgcgccggaagatcggggaatttgcgatgtcctcgtcgctaacggcaaaattatcgccgttgccagcaatatcccttctgacattgtaccgaactgcacggttgtcgatctcagTGGGCAGAGGATCTGCCCa > 1:463198‑M1/125‑143 (MQ=255) caaccaCTGACGTGACGCCCGCTTCCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGCTCTGCCCACTgagg > 1:233981/1‑142 (MQ=255) caaccaCTGACGTGACGCCCGCTTCCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTgaga > 1:435999/1‑143 (MQ=255) ccaCTGACGTGACGCCCGCTTCCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTCGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCg > 2:490183/1‑143 (MQ=255) tgacgtgacgCCCGCTTCCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGAAGTGTTGATCAATAAAACCTGGGCCGAGGATGTGCCCACCGAAATCGACaa > 2:89273/1‑143 (MQ=255) tgcggCCCGCTACCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGCGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTg < 1:431535/139‑1 (MQ=255) tgacgCCCGCTTCCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGAGCGACAACCGTg > 2:25184/1‑143 (MQ=255) tgacgCCCGCTTCCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGCGCAGAGGATCTGCCCACTGAGATCGACAACCGTg > 1:710954/1‑143 (MQ=255) gCCCGCTTCCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCCGAGCATCTGCCCACTGAGATCGACAACCGTGCAgg > 2:113850/1‑142 (MQ=255) ttCCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCGGCTTCGCCGCCACCGCCAATCAAATGGACGTGCTGATCAATAAAACCTGGGCAGAGGATCCGCCCACTGAAACGGACAACCGTGAAgggccgca > 2:513999/1‑136 (MQ=255) gTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAAt > 1:185905/1‑143 (MQ=255) gTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGAACGAGTTGAACAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAAt > 1:20336/1‑143 (MQ=255) cAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTGCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGt < 1:501533/143‑1 (MQ=255) cGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATTGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACACTGTCAGa > 1:819862/1‑143 (MQ=255) gcgcCACTTCCGGCGTGCGCGTCGTGTGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGata < 1:540829/143‑1 (MQ=255) gcgcCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGCTCGGTACACTGTCAGAAGGGata > 2:789485/1‑143 (MQ=255) cgcCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGCAggcacct > 1:702008/1‑138 (MQ=255) cctctCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGc < 2:422605/139‑1 (MQ=255) acgtCCGGCGTGCGCGTCGTGCGACCTGCTTCGCCGCCACCGCCAACCAAATGGACGTGTCGATCAATAACACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCt < 1:490195/140‑1 (MQ=255) ttCCGCCGTGCGCGTCGTGGGACCTGCTCCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACACTGTCAGAAGGGATATTGCTgg < 1:682842/143‑1 (MQ=255) gtCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTgg < 1:844117/142‑1 (MQ=255) cGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAAGCTGGGCAGAGGATCTGCCCACTGAGCTCGACAACCGTGCCGGTCGGTACAAGGTAAGAAGGGAGATCGCTgacca > 2:270553/1‑139 (MQ=255) cGGCGTGCGCGTCGTCGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCaa < 2:24313/143‑1 (MQ=255) gTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACACTGTCGGAGGGGATATTGCTGGCAACGGc > 1:261790/1‑143 (MQ=255) gcgcGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGa < 1:608682/143‑1 (MQ=255) gtGGGACCTGCTTCGCCGACACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGAGCAGAGGATCTGCCCACTGAGATCAACAACCGTGCAGTTCGGTACAATATCAGAAGCGATATCGCTGGCCACGGCGATAAtctt > 2:449532/1‑143 (MQ=255) gccTGCTTCGCCGTCACCGCCAATCAAATGGACGTTTTGATCAATAAATCCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAATTTTGCCGt < 2:839256/142‑1 (MQ=255) tGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCGGTTCGGTACAAGCTCAGAAGGGCTATGGCTGGCAACGGCGCTACTCTTGCCGTTac > 1:741745/1‑142 (MQ=255) tGCTTCGCCGCCACCGCCAATCAAATGAACGCAACAAACAAAAAAAGCTGGGCAGAGGATCTGCCCACTAAGCTCAACAACGGGACAATACGGAACAATGTCGAAAGGGATGTTACTGACAACGGCAGTAATTTTGCCGTTAg > 2:692572/1‑143 (MQ=255) gCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGTCGATAATTTTGCCGTTAGc > 1:219096/1‑143 (MQ=255) cTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAACCCTGGGCAGAGGATGTGCCCACTGAGAGCGACAACCGTGCAGTTCGGTACAACGTCACAAGGGATAACGCTGACAACGGCGATAATCTTGCCGTTAGcg > 2:313252/1‑143 (MQ=255) cTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAATTTTGCCGTTAGcg > 1:198526/1‑143 (MQ=255) cTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAATTTTGCCGTTAGcg > 1:751663/1‑143 (MQ=255) tCGCCGCCACCGCCAATCAAATGGACGTGTAGATCTCGGAGGCCGCCGCAGCAGAACTACCAACAGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAATATTGCCGTTAGcgaa > 2:758624/1‑142 (MQ=255) ccgccaccgccaATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAATTTTGCCGTTAGCGACGAg < 2:300648/143‑1 (MQ=255) cgccaccgccaATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAATTTTGCCGTTAGCGACGAgg < 1:746224/143‑1 (MQ=255) ccgccaATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAATTTTGCCGTTAGCGACGAGGACATc < 2:367489/143‑1 (MQ=255) ccaATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCAACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAATTTTGCCGTTAGCACAGAGGACACCGCa > 2:600859/1‑143 (MQ=255) accgaactgcacggttgtcgatctcagTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTg > 1:60957‑M1/28‑97 (MQ=255) accgaactgcacggttgtcgatctcagTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTg < 2:60957‑M1/70‑1 (MQ=255) aaaTGGACGTGGTGATCAATAAGACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAATTTTGCCGTTAGCGACGAGGACATCGCAAATTcc < 2:21062/143‑1 (MQ=255) aaTGGACGTGTTGACCAATAATACCCGGGCAGAGTATCTTCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAATTTTGCCGTTAGCGACGAGGACATCGCAAATTccc < 1:242299/143‑1 (MQ=255) tGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAATTTTGCCGTTAGCGACGCGGACATCGCAAATTGCCCg > 1:757251/1‑143 (MQ=255) tGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAATTTTGCCGTTAGCGACGAGGACATCGCAAATTCCCCg > 1:684661/1‑143 (MQ=255) tgtTGATCAATAAATCCTGGGCAGAGGATCTGCCCACTGAGATCGACAACTGTGCAGTTTGGTATAATGTCAGAAGGGATATTGCTGGTAACGGCGATAATTTTGCCGTGAGCGACGAGGACATCGCAAATTCCCCGATCTTc < 1:686033/143‑1 (MQ=255) ttGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATGATTTTGCCGGTAGCGACGAGGACATCGCAAATTCCCCGATCTTCCg > 1:427230/1‑143 (MQ=255) aTCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAGCGGCGATAATTTTGCCGTTAGCGACGAGGACATCGCAAGTTCCCCGGTCTTCCGgcg > 1:218444/1‑143 (MQ=255) aaTAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAATTTTGCCGTTAGCGACGAGGACATCGCAAATTCCCCGATCTTCCGGCGCAt > 2:519788/1‑143 (MQ=255) tctcagtGGGCAGATCCTCTGCCAACTGAGATCGACAACCGTGCAGGGCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAATGTTGCCGGTAGCGAGGAGTACAGCGCGAATGCCGCCATCGTCCCGCCCAGACa > 2:763381/7‑143 (MQ=255) ccTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAATTTTGCCGTTAGCGACGAGGACATCGCAAATTCCCCGATCTTCCGGCGCATACAAATg < 2:365755/143‑1 (MQ=255) TGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAAGTTTGCCGTTAGCGACGAGGACATCGCAAATTCCCCGATCTTCCGGCGCATACAAATgcg > 2:150999‑M1/1‑143 (MQ=255) | AGATAGAGTCGGTGCCCAGCAGACCAACCACTGACGTGACGCCCGCTTCCGTCAGGCGACTTAGCGCCACTTCCGGCGTGCGCGTCGTGGGACCTGCTTCGCCGCCACCGCCAATCAAATGGACGTGTTGATCAATAAAACCTGGGCAGAGGATCTGCCCACTGAGATCGACAACCGTGCAGTTCGGTACAATGTCAGAAGGGATATTGCTGGCAACGGCGATAATTTTGCCGTTAGCGACGAGGACATCGCAAATTCCCCGATCTTCCGGCGCATACAAATGCG > NC_000913/4559199‑4559483 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |