New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1068451NA (NA)4 (0.090) 4/250 NT NA noncoding (2/34 nt) other REP92b
?NC_000913 2001998 = NA (NA)noncoding (30/34 nt) other REP141a

GATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACCTGCTG  >  NC_000913/2001858‑2002139
                                                                                                                                             |                                                                                                                                             
gATTGGGGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTa                                                                                                                                             <  2:854452/143‑1 (MQ=255)
   tAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTACACGCCTTATCCGGCCTACaa                                                                                                                                          >  2:521746/1‑143 (MQ=255)
        ggTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAAtg                                                                                                                                     >  1:642837/1‑143 (MQ=255)
        ggTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAAtg                                                                                                                                     >  2:837172/1‑143 (MQ=255)
             aaTGAGGGGTTATTTGGGGGATACAGGTAAATTCAAGGCAGAAAAAAACCCCGCAGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTGTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAACAAAAAGGGCaa                                                                                                                                >  2:18385/1‑143 (MQ=37)
                  ggggTTAGTTGGGGGTTACAGGTAAATTCCAGGCAGAAAACAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCa                                                                                                                           <  2:365632/143‑1 (MQ=255)
                         tttGGGGGTTACAGGTAAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATCCAATAAAtt                                                                                                                    >  2:199575/1‑143 (MQ=255)
                          ttGGGGGTTACAGGTAAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACACATACCCGATGCTACAAAAATGTGCCCATTCAATAAATTg                                                                                                                   >  2:397971/1‑143 (MQ=255)
                             ggggTTACAGGTAAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCaa                                                                                                                >  1:166170/1‑143 (MQ=255)
                              gggTTACAGGTAAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAAt                                                                                                               >  2:308058/1‑143 (MQ=255)
                              gggTTACAGGTAAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTCCAAt                                                                                                               >  2:832963/1‑143 (MQ=255)
                                     aGGTAAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAACTGCGCTTTATGTTGCCGGATGCGGAGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACtt                                                                                                        <  2:450449/143‑1 (MQ=255)
                                           aTTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGCTGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCCACGTGTAGGc                                                                                                  >  2:306814/1‑143 (MQ=255)
                                           aTTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCACCTAGTAGGc                                                                                                  >  2:520378/1‑143 (MQ=255)
                                            ttCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGcc                                                                                                 >  2:362426/1‑143 (MQ=255)
                                             tcttggCAGATAAATACCGGGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATATATTGCAATTCAACTTGTAGGCCt                                                                                                <  2:262974/139‑1 (MQ=25)
                                                 ggCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGTTGCCAAATTGCGATTTATGTTGGCGGATGCGGGGTAAATGCCTTATGTGGGCTACAAAAGTGTGCAAATTCAATAAGTTGCAATTCAACTTGTAGGCCTGATa                                                                                            >  1:231299/1‑143 (MQ=255)
                                                 ggCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATCAATTGCAATTCAACTTGTAGGCCTGATa                                                                                            >  1:64840/1‑143 (MQ=255)
                                                  gCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATaa                                                                                           >  2:719191/1‑143 (MQ=255)
                                                  gCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATaa                                                                                           >  1:332408/1‑143 (MQ=255)
                                                  gCAGAAAAAAACCCCGCCGGGGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATaa                                                                                           <  1:684598/143‑1 (MQ=255)
                                                   cAGAAAAAATCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAag                                                                                          <  1:37333/143‑1 (MQ=255)
                                                    aGAAAACATCCCCGCCGGTGGCGTGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAagc                                                                                         <  2:322836/143‑1 (MQ=255)
                                                    aGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAagc                                                                                         >  1:654760/1‑143 (MQ=255)
                                                       aaaaaaACCCGACGGTGGGGGGAAAGCACGTTGCTGACAAATTGCACATTAAGATGCCGGATGCGGCGTAACCGCTTTAAAAAAAAAAAAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAagcgca                                                                                      <  2:599521/143‑1 (MQ=255)
                                                        aaacaCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAagcgcag                                                                                     <  1:524069/143‑1 (MQ=255)
                                                        aaaaaCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATGGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAagcgcag                                                                                     <  1:523847/143‑1 (MQ=255)
                                                         gaagccccGCCGGTGGCGGGGAAGCTCGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAagcgcagc                                                                                    <  2:611708/139‑1 (MQ=255)
                                                            aCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAgcgcagcgca                                                                                 <  1:120977/143‑1 (MQ=255)
                                                             ccccGCCGCTGGCGGCGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATATATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCAt                                                                                <  1:37800/143‑1 (MQ=255)
                                                              cccGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCCACAAGAATGTGCACATTCAATACATTGCAATTCAACTTGTAGGGCCGATAAgcgcagcgcagc                                                                               >  2:543130/1‑141 (MQ=25)
                                                               ccgccgGTGGCGTGTAAGTACGTTGCTGACAAATTGTTCTTTATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCa                                                                              <  1:255808/143‑1 (MQ=21)
                                                                            ggAAGCACGTTGCTGACAAATTGCACTTTATGTTGCCGGATGCGGCGTAACCGAATCCTACCACCCATAAAAAACCACATTTACAATACATTGCAATTCCACATATAGGCCGGATAAGCGCAACGCATCAGGCAAATTGGCgc                                                                 >  2:403426/1‑142 (MQ=255)
                                                                             gAAGCGCGTTGCTGACTAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTTATAAGCGCAGCGCATCAGGCAATTTGGCGtt                                                                <  2:51958/143‑1 (MQ=255)
                                                                               ttgcaatttattgaatttgcacatttttgtaggacggataaggcgtttacgccgcatccggcCTACAAAAATGTGCACATTCAATAAATTGCAATTCAACTTGTAGGCCTGCTACGCGCAGCGCATCAGGCAATTTGGCGTTg                                                               >  1:384722‑M2/63‑143 (MQ=255)
                                                                               aGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGc                                                              <  2:532377/143‑1 (MQ=255)
                                                                               aGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGc                                                              <  2:207290/143‑1 (MQ=255)
                                                                                 cACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAACAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCg                                                            >  1:566539/1‑143 (MQ=255)
                                                                                 cACGTTGCTGACAAATTGCGCATTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAAGGTGCAAATTCAATAAATTGCTATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCg                                                            <  1:441379/143‑1 (MQ=255)
                                                                                  caatttattgaatttgcacatttttgtaggccggataaggcgtttacgccgcatccggcCTACATAAATGTGCAAATCCAATAAATTGCAATTCAACTGGTCGGCCTGATAAGCGCAGCGCATCAGGCAGCTTGGCGACGCCg                                                            >  2:510076‑M2/60‑143 (MQ=255)
                                                                                         tGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGtctc                                                    >  2:283208/1‑143 (MQ=255)
                                                                                         tGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGtctc                                                    >  1:747745/1‑143 (MQ=255)
                                                                                          gACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCa                                                   <  1:760485/143‑1 (MQ=255)
                                                                                          gACAAATTGCGCTTTATGTTGCCGGATGCGGAGTTTCCACCGTAGCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCa                                                   <  2:399202/143‑1 (MQ=37)
                                                                                           aCAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAg                                                  <  1:635680/143‑1 (MQ=255)
                                                                                            cAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAAAGTGCAAAAAAAATATTTTGCAATTCAACTTGTAGGCCTGATCAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGt                                                 >  1:127152/1‑143 (MQ=25)
                                                                                              aaTTGCGCTTTATGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTa                                               <  1:201315/143‑1 (MQ=255)
                                                                                                ttGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACTGTGCATCTTCATTAAATTGCCATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGGTGCCGTCGGCATCAGTTTAt                                             >  1:89256/1‑143 (MQ=21)
                                                                                                     cTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCACTTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGGCCCAGTTAATCAgga                                        >  2:761013/1‑142 (MQ=255)
                                                                                                             tGCCGGATGCGGCGTAAGCGCCTTAGCCGGCCGACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTGGTAGGCCTGATAAGCGCAGCGCACCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGa                                <  1:686974/143‑1 (MQ=25)
                                                                                                             tGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCGGTCAGTCTCAGTTAATCAGGTTACAACGa                                <  1:462549/143‑1 (MQ=255)
                                                                                                              gCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGACTCAGTTAATCAGGTTACAACGAt                               >  2:739451/1‑143 (MQ=255)
                                                                                                               gccggataaggcgtttacgccgcatccggcCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTACTCCGGTTACCACGAt                               >  2:130721‑M2/31‑143 (MQ=255)
                                                                                                               ccGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGAtt                              >  2:246659/1‑143 (MQ=255)
                                                                                                               ccGGATGCGGCGGAAACGCCGTATCCGGCCTACAAAAATGTGCAAATTCAATAAATCGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGAtt                              <  1:205050/143‑1 (MQ=255)
                                                                                                                 ggAGGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTaa                            <  1:529309/143‑1 (MQ=255)
                                                                                                                   gataaggcgtttacgccgcatccggcCTACAAAAATGTGCAAATTCCATAAATTGCAATTCAACTTGTAGCCCTGATAAGCGCCGCGCATCCGGCAACTTGGCCTTGCCGTCAGTCTCAGATAATAAGAAAACAACGATTAAc                           >  1:847589‑M2/27‑143 (MQ=255)
                                                                                                                      cggcgTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCACAGTTAATCAGGTTACAACGATTAACCCTg                       >  1:129542/1‑143 (MQ=255)
                                                                                                                       ggcgTAGACGCCTTATGAGGTCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTgc                      <  2:218792/143‑1 (MQ=255)
                                                                                                                       ggcgTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAGATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTgc                      <  2:381568/143‑1 (MQ=255)
                                                                                                                         cgTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTgcag                    <  2:887348/143‑1 (MQ=255)
                                                                                                                           tAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTgcagca                  <  1:529775/143‑1 (MQ=255)
                                                                                                                               cGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAgaga              <  2:221990/143‑1 (MQ=255)
                                                                                                                                gCCTTATCCGGCCTACAAAAATGGGCAAATTCAATAAAGTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGAc             <  1:263766/143‑1 (MQ=255)
                                                                                                                                     tatgcgggCTACAAGAATGTGCAAATTCAATTATTTGCAATTCAACTTGTAGGCCTTATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTATCCCTGCAGCAGAGACAGaa         <  2:296347‑M2/135‑1 (MQ=255)
                                                                                                                                       tccggcCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAAcc       >  1:825727‑M2/7‑143 (MQ=255)
                                                                                                                                          ggcCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTCACCCTGCCGCCGAGCCGGCACctgc    >  1:372395‑M2/4‑143 (MQ=255)
                                                                                                                                            cCTACAAAAATGTGCAAATTCAATAGATTGCAATTCATCTTGTAGGCCTGATGAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACctgctg  <  2:725222‑M2/142‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                             
GATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACCTGCTG  >  NC_000913/2001858‑2002139

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.