New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3070076 =	NA (NA)	4 (0.090)	3/250	NT	NA	noncoding (26/29 nt)	other	REPv213b
	?	NC_000913	= 3512510	NA (NA)					intergenic (‑166/+124)	yhfZ/trpS	putative DNA‑binding transcriptional regulator YhfZ/tryptophan‑‑tRNA ligase

TTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGCCACAA  >  NC_000913/3512370‑3512650                                                                                                                                             |                                                                                                                                             ttATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATGTTGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTgc                                                                                                                                            >  1:334261‑M2/1‑141 (MQ=255) ttATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGCTGATAGAAGCAAAATTgc                                                                                                                                            <  1:325793‑M2/143‑3 (MQ=255) ttATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTCTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTgc                                                                                                                                            >  1:589456‑M2/1‑141 (MQ=255)  tataTCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTgcc                                                                                                                                           >  1:757388‑M2/1‑140 (MQ=255)  tataTCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTAGTGCAAATTAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTgcc                                                                                                                                           >  2:384936‑M2/1‑140 (MQ=255)   atatCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTgcct                                                                                                                                          <  2:428605‑M2/143‑5 (MQ=255)        ttCAGGAATTTGAAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATgc                                                                                                                                     >  1:192663/1‑143 (MQ=255)        ttCAGGAATTTGAAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATCATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATgc                                                                                                                                     >  2:269265/1‑143 (MQ=255)         acacacaTTTGAAGATAAGGCGCGACAGCGAAAGGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTTCAAATGAGGATAAAAAAACCGTGTTTCCCCTGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATgcg                                                                                                                                    <  2:274700/137‑1 (MQ=255)             gAATTTGAAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGAATGGCAGGTTTCAGAGTGTTGATAAAAGCAAAATTGCCTGATGCGCTAc                                                                                                                                >  2:839517/1‑143 (MQ=255)                tttGAAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGATTCAGAGAGATGATAAAAGCAAAATTGCCTGATGCACTACGCt                                                                                                                             >  1:167348/1‑143 (MQ=255)                 gtGAAGATCAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCtt                                                                                                                            <  2:26016/142‑1 (MQ=255)                   gAAGATAAGGCGCAGCAGCGAGATGTGGAAACGGCGAGGCACTTCACATTGTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTAt                                                                                                                          <  1:546278/143‑1 (MQ=255)                      gagaaGGCGAAACAGCGAGATGTGGAAACGGCGAGGAAGTTGACAGTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAg                                                                                                                       <  1:814510/140‑1 (MQ=39)                      gATAAGGGGCGAAGGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAg                                                                                                                       <  1:389729/143‑1 (MQ=255)                      gATAAGGCGCAGCAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAg                                                                                                                       <  1:332000/143‑1 (MQ=255)                      gATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTgcctgataagcgtagcgcatcag                                                                                                                       >  1:33604‑M2/1‑120 (MQ=255)                      gATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTCTCACCATTATCACTATGGAGAATCAAACAACCCGGCTTCCCCGGTTTCAGAGTGATGATAAAAACAAACTTGCCTGATGCGCTACCCTTACCAg                                                                                                                       >  2:646608/1‑143 (MQ=255)                      gATAAGGCGCAACAGCGAGATGGGGAAACGGCGAGGCACTTCACATTTTTTGGGATTATTGCAAATGAGGATAAAAAAACCGGGTTGCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTgcctgataagcgtagcgcatcag                                                                                                                       >  2:698939‑M2/1‑120 (MQ=255)                            gcgcAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTAc                                                                                                                 >  2:792888/1‑143 (MQ=255)                                aaCAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAttt                                                                                                             >  2:687802/1‑143 (MQ=255)                                aaCAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCCACAttt                                                                                                             >  1:849066/1‑143 (MQ=255)                                   aGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCt                                                                                                          <  1:886115/143‑1 (MQ=255)                                        gaTGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCaa                                                                                                     <  2:357418/143‑1 (MQ=255)                                         aTGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAat                                                                                                    >  1:469743/1‑143 (MQ=255)                                            tgGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAGTGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAACAAAATTGCCCGATGCGCTACGATTATCAGGACTACATTTCCTTGCAATAtg                                                                                                 >  2:900078/1‑143 (MQ=255)                                            tgGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGCGGATAAAAAAACCGGGTTTCCCCGGTTTCGGAGGGATGATAAACGAAAAATTGCCTGATGAGCGACGCGAATCAGGGACACATATCCTTGCAataag                                                                                                 >  1:258411/1‑141 (MQ=255)                                                aaCGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCa                                                                                             >  2:691719/1‑143 (MQ=255)                                                 aCGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGCTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTAAATTTCCTTGCAATACGTGcct                                                                                            >  2:154279/1‑141 (MQ=255)                                                   ggCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCCGGCCTACATTTCCTTGCAATATGTGCATTa                                                                                          >  1:780334/1‑143 (MQ=255)                                                         gCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGt                                                                                    <  2:818346/143‑1 (MQ=255)                                                           aCTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAg                                                                                  >  2:60978/1‑143 (MQ=255)                                                           aCTTCACATTTTGTCGGATTATTGCAAATGAGGATAAAAAAACCGGGGTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAg                                                                                  <  1:143257/143‑1 (MQ=255)                                                            tttCACATTTTTTCGGATTATTTCAAATGAGGATAAAATATCCTGGTTTCCCTGGTGTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAgg                                                                                 <  1:409555/142‑1 (MQ=38)                                                                acaTTTTTTCGGATTATTGCAAACGAGGATAAAAAAACCGAGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGATACGCTTATCAGGCCTACATTACCTTGCAATCTGTGCAATACTTTGTAGGCCgg                                                                             >  2:11700/1‑143 (MQ=38)                                                                              tattGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTCATCTGTCGGCCGGATAAGGCCTTCaag                                                               >  2:834985/1‑141 (MQ=38)                                                                                    aaaTGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCAt                                                         >  1:489866/1‑143 (MQ=255)                                                                                        gAGGATAAAAAAACCGGGTTTCCCCGGCTTCAGAGTGATGATAAAAGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTGGCAATATGTGCATTACTTTGTAGGCCGGATGCGGCGTGAACGCCTTATCCgg                                                     <  2:897632/143‑1 (MQ=37)                                                                                           gATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAt                                                  >  2:609146/1‑143 (MQ=255)                                                                                             tAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGa                                                >  1:677433/1‑143 (MQ=255)                                                                                              aaaaaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGaa                                               <  1:581540/143‑1 (MQ=255)                                                                                               aaaaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAAc                                              >  1:22319/1‑143 (MQ=255)                                                                                               aaaaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCATGAAc                                              >  2:382377/1‑143 (MQ=255)                                                                                                aaaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTGCACGCCGCATCCGGCATGAACa                                             >  1:183673/1‑143 (MQ=255)                                                                                                   aaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAg                                          >  1:53034/1‑143 (MQ=255)                                                                                                          ttgccccGGTGTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAAtt                                   <  2:209503/140‑1 (MQ=255)                                                                                                               ccGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCa                              <  1:176778/143‑1 (MQ=255)                                                                                                               ccGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCa                              >  1:531912/1‑143 (MQ=255)                                                                                                                   ttacAGAGTGATGATAAAAGCAAAATTGACTGATGCGCTACGCTTATCAGGCATACATTTCCTTGCAATATGTGCATTACTTTGTAGGACGGATAAGGGGTTCACGCGGAATCCGGCATGAACAAAGGGTAATTTGCGAGCaa                          >  2:32709/4‑143 (MQ=37)                                                                                                                     tCAGAGGGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATa                        <  1:269265/143‑1 (MQ=255)                                                                                                                        gagTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCCGGCCCACATTTCCTTGCAGTACGTGCAGTACTTCACAGGCCGGATACGACCTCCACGCCGCACACCCCATGAACAGAGCGCAACATGCCAACAATatgc                     >  2:463235/1‑140 (MQ=19)                                                                                                                          gTGATGATAAACGCACACTTCCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTGGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGaa                   <  2:481093/143‑1 (MQ=37)                                                                                                                              tgatAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTAc               >  1:644199/1‑143 (MQ=255)                                                                                                                                atAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACgg             >  2:413871/1‑143 (MQ=255)                                                                                                                                  aaaaGCAAAATTgcctgataagcgtagcgcatcaggcaattttgctttt                                                                                                         >  1:243824‑M2/1‑12 (MQ=255)                                                                                                                                  aaaaGCAAAATTgcctgataagcgtagcgcatcaggcaattttgctttt                                                                                                         <  2:243824‑M2/49‑38 (MQ=255)                                                                                                                                    aaGCAAAATTGTCTTTTGTTTTACGTTTATCAGGCTTACATTTCCTTGCAATATGTGCATGACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTc         <  1:845869/143‑1 (MQ=25)                                                                                                                                      ggaacaTTGCCTGTTGCGCTACGTTTATGAGGCCTACATTTCTTTGTTATATGTGGGTTTCTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCTTGAACTAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGc       <  2:848345/138‑1 (MQ=25)                                                                                                                                      ggaaaaTTGCCGGATGCGCTACGCTTAGCAGGCCGACATGGCCTTGCAATATGTGCATTACGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAAGTTGCCAGCAATAGTGAATTACGGCTTCGc       <  2:71882/141‑1 (MQ=37)                                                                                                                                      gCAAAGTTGCCTGATGCGCTACGGTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTGGTAGGCCGGATAAGGCGTTCCCGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGc       <  2:71833/143‑1 (MQ=255)                                                                                                                                      gCAAAATCGCCTAATGCCCTCCTCTGACCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGc       <  1:658592/143‑1 (MQ=37)                                                                                                                                           cttGCCTGATGGGCTACGCTTATCAGGCCCACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCCCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGCCACaa  <  1:508944/142‑1 (MQ=255)                                                                                                                                             |                                                                                                                                             TTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGCCACAA  >  NC_000913/3512370‑3512650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.