mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 13 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1961648 = | 58 (1.270) | 3 (0.070) | 3/258 | NT | 4.9% | coding (1587/1734 nt) | argS | arginine‑‑tRNA ligase |
| ? | NC_000913 | 1961694 = | 61 (1.360) | coding (1633/1734 nt) | argS | arginine‑‑tRNA ligase | |||||
| * | ? | NC_000913 | = 572411 | 469 (10.240) | 6 (0.140) | 4/250 | NT | 1.7% | coding (44/102 nt) | ylcH | DLP12 prophage; uncharacterized protein YlcH |
| ? | NC_000913 | = 572431 | 242 (5.580) | coding (64/102 nt) | ylcH | DLP12 prophage; uncharacterized protein YlcH | |||||
| * | ? | NC_000913 | 572405 = | 527 (11.510) | 7 (0.200) +31 bp |
6/202 | NT | 1.7% | coding (38/102 nt) | ylcH | DLP12 prophage; uncharacterized protein YlcH |
| ? | NC_000913 | = 1095504 | NA (NA) | intergenic (‑67/‑40) | insE‑4/ymdE | IS3 element protein InsE/protein YmdE | |||||
| * | ? | NC_000913 | 572316 = | 1613 (35.220) | 31 (0.730) | 11/244 | NT | 2.2% | intergenic (+65/‑52) | ybcM/ylcH | DLP12 prophage; putative DNA‑binding transcriptional regulator/DLP12 prophage; uncharacterized protein YlcH |
| ? | NC_000913 | 572345 = | 1277 (30.190) | intergenic (+94/‑23) | ybcM/ylcH | DLP12 prophage; putative DNA‑binding transcriptional regulator/DLP12 prophage; uncharacterized protein YlcH | |||||
| * | ? | NC_000913 | 570695 = | 1632 (35.640) | 46 (1.060) | 23/250 | NT | 3.0% | intergenic (+267/‑198) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL |
| ? | NC_000913 | 570719 = | 1386 (31.980) | intergenic (+291/‑174) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL | |||||
| * | ? | NC_000913 | = 570639 | 1747 (38.150) | 6 (0.150) | 5/238 | NT | 0.37% | intergenic (+211/‑254) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL |
| ? | NC_000913 | = 570663 | 1644 (39.860) | intergenic (+235/‑230) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL | |||||
| * | ? | NC_000913 | 570627 = | 1714 (37.430) | 6 (0.150) | 4/238 | NT | 0.38% | intergenic (+199/‑266) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL |
| ? | NC_000913 | 570677 = | 1644 (39.860) | intergenic (+249/‑216) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL | |||||
| * | ? | NC_000913 | 569768 = | 1872 (40.880) | 4 (0.090) | 4/248 | NT | 0.24% | coding (867/1527 nt) | ybcK | DLP12 prophage; putative recombinase |
| ? | NC_000913 | 569802 = | 1620 (37.680) | coding (901/1527 nt) | ybcK | DLP12 prophage; putative recombinase | |||||
| * | ? | NC_000913 | = 569159 | 1586 (34.630) | 48 (1.140) | 17/242 | NT | 3.1% | coding (258/1527 nt) | ybcK | DLP12 prophage; putative recombinase |
| ? | NC_000913 | = 569161 | 1523 (36.310) | coding (260/1527 nt) | ybcK | DLP12 prophage; putative recombinase | |||||
| * | ? | NC_000913 | 569149 = | 1576 (34.420) | 52 (1.240) | 17/242 | NT | 3.4% | coding (248/1527 nt) | ybcK | DLP12 prophage; putative recombinase |
| ? | NC_000913 | 569173 = | 1523 (36.310) | coding (272/1527 nt) | ybcK | DLP12 prophage; putative recombinase | |||||