New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2878135 =	46 (1.150)	3 (0.080)	3/250	NT	6.7%	intergenic (+517/+434)	iap/cas2	alkaline phosphatase isozyme conversion protein/CRISPR‑associated endoribonuclease Cas2
	?	NC_000913	2878153 =	40 (1.060)					intergenic (+535/+416)	iap/cas2	alkaline phosphatase isozyme conversion protein/CRISPR‑associated endoribonuclease Cas2

CCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGG  >  NC_000913/2877993‑2878273                                                                                                                                               |                                                                                                                                           ccagcTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCCCCGGCTTTATAAAGCTGCCGGTTTAt                                                                                                                                            >  1:643471/1‑143 (MQ=255)  cagcTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATc                                                                                                                                           >  1:268073/1‑143 (MQ=255)   agcTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATcc                                                                                                                                          <  2:37744/143‑1 (MQ=255)   agcTCCAGCAGCGGTTTATCCCCGCGGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATcc                                                                                                                                          <  1:206184/143‑1 (MQ=255)    gcTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATccc                                                                                                                                         <  1:35247/143‑1 (MQ=255)    gcTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCCTTCGGGGTGGGTCCGGTTTATCCCCGCTGGCGCGGGGGACTCTGGTTTCCGTATCTCCGGCTTTCTACAGGTGACGGCTTCTccc                                                                                                                                         >  2:658121/1‑143 (MQ=37)     ataatgttgagagttccccgcgccagcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgagtTcccc                                                                                                                                        <  1:604209‑M1/5‑1 (MQ=255)      tcatgttgagagtcccccgcgccagcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgagtTCCCCg                                                                                                                                       >  2:481773‑M1/138‑143 (MQ=255)      taatgttgagagttccccgtgctagcggggataaaccgtttgcatcaggtggggaatgtctgagaggtcgtgtgttccccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgagtTCCCCg                                                                                                                                       >  1:215594‑M1/138‑143 (MQ=255)      taatgttgagagttccccgcgccagcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgagtTCCCCg                                                                                                                                       <  1:319679‑M1/6‑1 (MQ=255)      taatgttgagagttccccgcgccagcggggataaaccgtttggatcgggtccggaggttctgagcggccgcgggtcccccgcgcccgcggggataaaccgcgaatcgcgcaacgcctgcgcggcgccgccggcgcgtACCCCg                                                                                                                                       <  2:754627‑M1/6‑1 (MQ=255)       ccAGCAGCGGTTTATCCCCGCTGGCACGGGGAACTCAAGCTGGCTGGCATTCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCGGGCGCGGGGGCCTCGAGTTTCCGGATCTCCGGAGTGAGCGAGCAGACGGTGTATcccccc                                                                                                                                      >  2:774463/1‑141 (MQ=255)        cagcggCGGTTTCTCCCCGCTGGCGCGGGGAACTCACGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCt                                                                                                                                     <  2:772707/143‑1 (MQ=255)           cggcGGTTTATCCCCGCTGGGGCGGGGACGTCAAGCTGGCTGGCAATCTCTTGCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGgc                                                                                                                                  <  2:587714/141‑1 (MQ=255)             gcGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCGCCGGATTTATAAAGCTGACGGTTTAGCCCCGCTGgcgc                                                                                                                                >  1:305122/1‑143 (MQ=255)              cGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCAGGCGCGGGCGACTCTACTCTACGTACCCCCGGATTTATAATGCTCACGGTTTAGCTCCGCTGGcgcg                                                                                                                               >  1:313626/1‑143 (MQ=255)                gcttcgccccGCTGCCGCGGGGAACTCAGGCTGGCTGGCAATCCCTTTCGGGGTGAGTCCGGTTCATCCCCGCCGGCGCGGGGACCTCTAGTTTCCGGATGTCCGGCTTGGCAAAGCTGACGGTTTATCCCCGCTGGCGCggg                                                                                                                             <  2:57247/137‑1 (MQ=255)                   tccccgcgccagcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagatccccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgagtTCCCCGCTGGCGCAGGGaa                                                                                                                          >  2:653778‑M1/125‑143 (MQ=255)                     tCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGAGTTATAAAGCTGACGGGTTGTCCCCCCCGGGGCGGGGAACt                                                                                                                        >  2:297706/1‑143 (MQ=255)                       cccGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATCAAGCTGCCGGTTTATCCCCGCTGGCGCGGGGAACTCg                                                                                                                      >  1:456722/1‑143 (MQ=255)                        ccGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTCGGATCGGTATCTGCGGAGTTCGGAAGAGGGCGGTGTAGGGCCGCTGGGGCggggcgctggt                                                                                                                     >  2:611149/1‑136 (MQ=255)                        ccGCGGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGc                                                                                                                     <  1:747191/143‑1 (MQ=255)                              gcgcgcGGAACTCAAGCTGGCGGGCAATCTCGTGCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAggcgg                                                                                                               <  2:673901/143‑1 (MQ=255)                                  ggggAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCATGCCCGGCATCCGCATTGGCGAAGCCGGCGGTTTATCCCCGCCGGCGCGGGGACCTCTGCGGCGGCGaa                                                                                                           >  2:317773/1‑142 (MQ=9)                                         tctaGCTGGCTGGCTGTCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAGAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAgg                                                                                                    <  2:305122/140‑1 (MQ=255)                                                ggctggcAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGATGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATgcg                                                                                             <  1:776257/143‑1 (MQ=255)                                                   tggcAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTGTGCGCGa                                                                                          >  1:578955/1‑143 (MQ=255)                                                   tggcAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGa                                                                                          >  1:677646/1‑143 (MQ=255)                                                    ggcAGTCTCTTTCGGGGTGCGTGCGGTTTCCCCCCGCGGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTAACCGCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGAt                                                                                         <  2:660505/143‑1 (MQ=255)                                                       caTCTCTTGCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTcg                                                                                      <  2:248335/142‑1 (MQ=255)                                                       aaTCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGCACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTcg                                                                                      >  1:355843/1‑143 (MQ=255)                                                         tcttgtacGGGTTGAGTCCGGTTGATCCCCGCTGGGGCGGGGAACTCTAGTTTCCGTATCTCCGTATTTATAAAGCTGACGGTTTATCCCCGCTTGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTcgcg                                                                                    <  1:412343/136‑1 (MQ=255)                                                             tttCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGttt                                                                                <  1:371387/143‑1 (MQ=255)                                                             tttCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGttt                                                                                >  1:445099/1‑143 (MQ=255)                                                             tgtCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGttt                                                                                <  1:53410/141‑1 (MQ=255)                                                                 ggggTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGCGTATGCTCGATTCGCGGCTTATcc                                                                            >  2:545713/1‑143 (MQ=255)                                                                       agcccGCTTTAGCCGCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAGGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTg                                                                      <  2:234141/140‑1 (MQ=255)                                                                        ggcccgTTTATCCCCGCTGGCGCTGGGGACTCTATTTTCCGTAGCTCCGGATTTATACAGCTGCCGGTTTATCCCCGCTGTCGCGGGGAACCCGCAGGCGGCGACGCGCAGCGTATGCGCGATTCGCGGTTTATCCCCGCTgg                                                                     <  2:409312/138‑1 (MQ=255)                                                                         tCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGGCGCGCAGGGGATGCGCGATTCGCGGGTTATCCCCGCTGgc                                                                    >  1:223955/1‑143 (MQ=255)                                                                          ccGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGgcg                                                                   >  1:60574/1‑143 (MQ=255)                                                                            ggTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCCGGCGGCGCCGCGCAGGGCATGCGCGATTCGCGGTTTATCCCCGCTGCcgcg                                                                 >  1:269795/1‑143 (MQ=255)                                                                            ggTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGcgcg                                                                 >  1:677122/1‑143 (MQ=255)                                                                                   cccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgagtTCCCCGCTGGCGCGGGGAACTCGCAggcgg                                                                                                               <  2:136239‑M1/30‑1 (MQ=255)                                                                                   cccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgagtTCCCCGCTGGCGCGGGGAACTCGCAggcgg                                                                                                               >  1:136239‑M1/61‑90 (MQ=255)                                                                                    cccGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGGTTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGATCtt                                                         <  2:525440/143‑2 (MQ=255)                                                                                        ggggCGCGGGGAACGCTAGTTTCTGGATCGCCGCATTCATAAGGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGa                                                     <  2:643471/141‑1 (MQ=255)                                                                                               ggggAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCa                                              <  2:528606/143‑1 (MQ=255)                                                                                                    aCTCTAGTGTCCGTATCGCCGGAGTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAAt                                         <  2:275090/143‑1 (MQ=255)                                                                                                       ctAGTGTCCGTAGCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTcc                                      <  2:62602/143‑1 (MQ=255)                                                                                                        tAGTTTCCGTATCTCTGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCa                                     <  1:217856/143‑1 (MQ=255)                                                                                                        tAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGTAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCa                                     <  1:396595/143‑1 (MQ=255)                                                                                                                gtctccccGGATTTATAGAGCTGCCGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGAt                             <  2:786882/137‑1 (MQ=255)                                                                                                                gTATCTCCGGATGTAGACAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGAt                             <  2:683864/143‑1 (MQ=255)                                                                                                                 tATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATc                            <  1:720306/143‑1 (MQ=255)                                                                                                                 tATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATc                            <  1:47896/143‑1 (MQ=255)                                                                                                                     tcCGGGTCTCTAAAGCTGACGGTGTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCaaa                        <  2:569323/143‑1 (MQ=255)                                                                                                                      ccGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAAc                       <  1:723319/143‑1 (MQ=255)                                                                                                                        ggATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACgg                     >  1:378551/1‑143 (MQ=255)                                                                                                                               taAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATcc              <  1:203996/143‑1 (MQ=255)                                                                                                                                         ggTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACGCGGACCCAACGCGCGATCCCCGCTGgcgc    >  2:509958/1‑143 (MQ=255)                                                                                                                                         ggTTTATCCCCGCGGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGgcgc    <  1:531024/143‑1 (MQ=255)                                                                                                                                           tttATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCgg  <  1:430114/143‑1 (MQ=255)                                                                                                                                           tttATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCAGCTGGCGCgg  >  1:28271/1‑143 (MQ=255)                                                                                                                                           gtgcTCCCCGCTGGCGCGGGGAACGCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCgg  >  2:733928‑M1/5‑143 (MQ=255)                                                                                                                                               |                                                                                                                                           CCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGG  >  NC_000913/2877993‑2878273

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.