| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2878135 = | 46 (1.150) | 3 (0.080) | 3/250 | NT | 6.7% | intergenic (+517/+434) | iap/cas2 | alkaline phosphatase isozyme conversion protein/CRISPR‑associated endoribonuclease Cas2 |
| ? | NC_000913 | 2878153 = | 40 (1.060) | intergenic (+535/+416) | iap/cas2 | alkaline phosphatase isozyme conversion protein/CRISPR‑associated endoribonuclease Cas2 | |||||
TATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTAT > NC_000913/2878011‑2878290 | tccccgcgccagcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagatccccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgagtTCCCCGCTGGCGCAGGGaa > 2:653778‑M1/125‑143 (MQ=255) tCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGAGTTATAAAGCTGACGGGTTGTCCCCCCCGGGGCGGGGAACt > 2:297706/1‑143 (MQ=255) cccGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATCAAGCTGCCGGTTTATCCCCGCTGGCGCGGGGAACTCg > 1:456722/1‑143 (MQ=255) ccGCGGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGc < 1:747191/143‑1 (MQ=255) gcgcgcGGAACTCAAGCTGGCGGGCAATCTCGTGCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAggcgg < 2:673901/143‑1 (MQ=255) ggggAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCATGCCCGGCATCCGCATTGGCGAAGCCGGCGGTTTATCCCCGCCGGCGCGGGGACCTCTGCGGCGGCGaa > 2:317773/1‑142 (MQ=9) tctaGCTGGCTGGCTGTCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAGAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAgg < 2:305122/140‑1 (MQ=255) ggctggcAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGATGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATgcg < 1:776257/143‑1 (MQ=255) tggcAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTGTGCGCGa > 1:578955/1‑143 (MQ=255) tggcAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGa > 1:677646/1‑143 (MQ=255) ggcAGTCTCTTTCGGGGTGCGTGCGGTTTCCCCCCGCGGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTAACCGCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGAt < 2:660505/143‑1 (MQ=255) caTCTCTTGCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTcg < 2:248335/142‑1 (MQ=255) aaTCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGCACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTcg > 1:355843/1‑143 (MQ=255) tcttgtacGGGTTGAGTCCGGTTGATCCCCGCTGGGGCGGGGAACTCTAGTTTCCGTATCTCCGTATTTATAAAGCTGACGGTTTATCCCCGCTTGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTcgcg < 1:412343/136‑1 (MQ=255) tttCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGttt < 1:371387/143‑1 (MQ=255) tttCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGttt > 1:445099/1‑143 (MQ=255) tgtCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGttt < 1:53410/141‑1 (MQ=255) ggggTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGCGTATGCTCGATTCGCGGCTTATcc > 2:545713/1‑143 (MQ=255) agcccGCTTTAGCCGCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAGGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTg < 2:234141/140‑1 (MQ=255) ggcccgTTTATCCCCGCTGGCGCTGGGGACTCTATTTTCCGTAGCTCCGGATTTATACAGCTGCCGGTTTATCCCCGCTGTCGCGGGGAACCCGCAGGCGGCGACGCGCAGCGTATGCGCGATTCGCGGTTTATCCCCGCTgg < 2:409312/138‑1 (MQ=255) tCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGGCGCGCAGGGGATGCGCGATTCGCGGGTTATCCCCGCTGgc > 1:223955/1‑143 (MQ=255) ccGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGgcg > 1:60574/1‑143 (MQ=255) ggTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCCGGCGGCGCCGCGCAGGGCATGCGCGATTCGCGGTTTATCCCCGCTGCcgcg > 1:269795/1‑143 (MQ=255) ggTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGcgcg > 1:677122/1‑143 (MQ=255) cccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgagtTCCCCGCTGGCGCGGGGAACTCGCAggcgg < 2:136239‑M1/30‑1 (MQ=255) cccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgagtTCCCCGCTGGCGCGGGGAACTCGCAggcgg > 1:136239‑M1/61‑90 (MQ=255) cccGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGGTTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGATCtt < 2:525440/143‑2 (MQ=255) ggggCGCGGGGAACGCTAGTTTCTGGATCGCCGCATTCATAAGGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGa < 2:643471/141‑1 (MQ=255) ggggAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCa < 2:528606/143‑1 (MQ=255) aCTCTAGTGTCCGTATCGCCGGAGTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAAt < 2:275090/143‑1 (MQ=255) ctAGTGTCCGTAGCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTcc < 2:62602/143‑1 (MQ=255) tAGTTTCCGTATCTCTGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCa < 1:217856/143‑1 (MQ=255) tAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGTAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCa < 1:396595/143‑1 (MQ=255) gtctccccGGATTTATAGAGCTGCCGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGAt < 2:786882/137‑1 (MQ=255) gTATCTCCGGATGTAGACAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGAt < 2:683864/143‑1 (MQ=255) tATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATc < 1:720306/143‑1 (MQ=255) tATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATc < 1:47896/143‑1 (MQ=255) tcCGGGTCTCTAAAGCTGACGGTGTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCaaa < 2:569323/143‑1 (MQ=255) ccGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAAc < 1:723319/143‑1 (MQ=255) ggATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACgg > 1:378551/1‑143 (MQ=255) taAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATcc < 1:203996/143‑1 (MQ=255) ccgcctgcgagttccccgcgccagcggggaACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCggg > 1:136239‑M2/31‑90 (MQ=255) ccgcctgcgagttccccgcgccagcggggaACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCggg < 2:136239‑M2/60‑1 (MQ=255) ggTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACGCGGACCCAACGCGCGATCCCCGCTGgcgc > 2:509958/1‑143 (MQ=255) ggTTTATCCCCGCGGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGgcgc < 1:531024/143‑1 (MQ=255) tttATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCgg < 1:430114/143‑1 (MQ=255) tttATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCAGCTGGCGCgg > 1:28271/1‑143 (MQ=255) gtgcTCCCCGCTGGCGCGGGGAACGCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCgg > 2:733928‑M1/5‑143 (MQ=255) ttagCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCggg > 2:654025‑M1/5‑143 (MQ=255) ttccctgcgccagcggggaACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGATCTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGa > 2:653778‑M2/20‑143 (MQ=255) CCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAActc < 2:216198‑M1/143‑1 (MQ=255) CGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAActct > 2:743086‑M1/1‑143 (MQ=255) CTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCa > 1:732992‑M1/1‑143 (MQ=255) ggCGCGGGGAGCTCGCAGGGGGCGACGCGCTGGGTCTGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAAc < 2:665759/143‑1 (MQ=255) gcgcGGGGGTCTGGCGGGCGGCGTCGCGCGGGGTATGCGCGCTTCGCGGTTTATCCCCGCTGGCGCTGGGAACGCGCGACCGCTCAGAAATTCCAGCCCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACa < 2:314065/143‑1 (MQ=255) cgcgGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCGGCTGGCGCGGGGAACTCTCAACAt > 1:274307/1‑143 (MQ=255) cggggtACGCGCCGGCGGCGCCGCGCAGGCGTTGCGCGATTCGCGGTTTATCCCCGCGGGCGCGGGGGACCCGCGGCCGCTCAGAACCTCCGGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTa < 2:754627‑M2/137‑1 (MQ=255) cggggaACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGGACTCTCAAcatga > 2:481773‑M2/7‑141 (MQ=255) cggggaACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTa < 1:319679‑M2/137‑1 (MQ=255) cggggaACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACACACGACCTCTCAGACATTCCCCACCTGATGCAAACGGTTTATCCCCGCTAGCACGGGGAACTCTCAACATTa > 1:215594‑M2/7‑143 (MQ=255) ggggaACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTAt < 1:604209‑M2/138‑1 (MQ=255) | TATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTAT > NC_000913/2878011‑2878290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |