New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1463437	56 (1.360)	6 (0.150)	5/262	NT	9.7%	coding (1313/1314 nt)	paaK	phenylacetate‑CoA ligase
	?	NC_000913	= 1463490	56 (1.380)					intergenic (+52/‑49)	paaK/paaX	phenylacetate‑CoA ligase/DNA‑binding transcriptional repressor PaaX

GGTATGCCACCAGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGC  >  NC_000913/1463297‑1463579                                                                                                                                             |                                                                                                                                               ggTATGCCACCAGCTGCGCCGTCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGAc                                                                                                                                              <  2:326938/143‑1 (MQ=255)    aTGCCACCAGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTa                                                                                                                                           >  1:482832/1‑143 (MQ=255)      gCCACCAGCGGCGCCATCGGATTAAGTCGGTGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATc                                                                                                                                         <  2:201435/143‑1 (MQ=255)       ccaccaGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTAGCg                                                                                                                                        >  2:296926/1‑143 (MQ=255)       ccaccaGCTGCGCCATCGGATTAAGTCCATGGAGTCGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCg                                                                                                                                        >  2:790205/1‑143 (MQ=255)        caccaGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGCGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGt                                                                                                                                       <  2:339281/143‑1 (MQ=255)          ccaGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGCTGATCGTTAACTGTGGCAGTATGCCGCGTTCAGAAGGCAAGGCGTGTAGGGTGGTTGATCTGACCGATACAGTGGGTGCGTGACGCATCGTCt                                                                                                                                     >  2:460144/1‑143 (MQ=255)          ccaGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCACGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTGTCGTCt                                                                                                                                     >  1:604176/1‑143 (MQ=255)              cTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGcc                                                                                                                                 <  1:159935/143‑1 (MQ=255)              cTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGcc                                                                                                                                 >  2:405537/1‑143 (MQ=255)                 cgcCATCGGATTCAGTCGATGGTGCGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCTCGTTCAGAAGGCTAGGCGTGTCGGGTGTTTGATCTGGGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCtg                                                                                                                              <  1:533263/143‑1 (MQ=255)                    cATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCtggtg                                                                                                                           <  1:786779/143‑1 (MQ=255)                      tCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCGTGGCGTATCGTCTGGCCCTGGTggg                                                                                                                         >  2:283916/1‑143 (MQ=255)                            tAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAg                                                                                                                   >  1:657401/1‑143 (MQ=255)                             atgtgtaTGGTGGTTAGCTCTGACGGTGTGATGAGCGTTACCTGTGGCAGTATGCCGCGTTCAGGAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCGGACGTATCGTCTGGCCCTGGTGGGGTAAAgc                                                                                                                  <  2:320187/137‑1 (MQ=255)                               gTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGCGGGGTAAAgcgc                                                                                                                >  2:716016/1‑143 (MQ=255)                               gTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCAGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAgcgc                                                                                                                <  1:481749/143‑1 (MQ=255)                                 cGATGGTGGGGATCTCTGCCGATGTGATGATCGCTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAAGATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCa                                                                                                              <  2:257573/143‑1 (MQ=255)                                  gATGCTGCGTATCTCGACCGATGTGATGATCGTTCATTGTCGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGacgtattgtctggccctggcgctttaccccaccag                                                                                                             <  1:173133‑M1/143‑36 (MQ=255)                                   aTGGTGGGGATCTCTACCGATGTGATGAGCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGacgtatcgtctggccctggcgctttaccccaccagg                                                                                                            <  1:349207‑M1/143‑37 (MQ=255)                                     ggtggGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGacgtatcgtctggccctggcgctttaccccaccagggc                                                                                                          <  2:594050‑M1/143‑39 (MQ=255)                                     ggtggGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGc                                                                                                          <  1:783666/143‑1 (MQ=255)                                       tggGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGtcgtatcgacttctggccctggcgctttaccccaccaggg                                                                                                        <  2:539923‑M1/143‑41 (MQ=255)                                       tggGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCa                                                                                                        <  2:734552/143‑1 (MQ=255)                                        ggggATCGCCAGCGATGTGCTGATCGTTACCTGTGGGAGTATCCGGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGtcgtatcgacttctggccctggcgctttaccccaccagggc                                                                                                       <  2:513816‑M1/143‑42 (MQ=255)                                          ggATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCCAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTCTCGTCTGGCCACGGCGGGGTCAGGCGACAGCGCCAgca                                                                                                     >  2:157336/1‑141 (MQ=255)                                          ggATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGaa                                                                                                     <  2:664476/143‑1 (MQ=255)                                             tctcTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTc                                                                                                  <  1:768699/143‑1 (MQ=255)                                                ctACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGAGTCGGGTGTTTGATCCGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGCGTAAAGCGCCAGGGCCAGAAGTCGAt                                                                                               >  2:216963/1‑143 (MQ=255)                                                 tACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGCGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTCAAGCGCCAGGGCCAGAAGTCGGTa                                                                                              >  2:257584/1‑143 (MQ=255)                                                 tACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGAGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGCCGACCGCCAGGGCCAGAAGTCGaca                                                                                              >  1:719749/1‑141 (MQ=255)                                                        gtgATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGacgtatcgacttctggccctggcgctttaccccaccagggccagacgatacgtcagg                                                                                       <  1:236210‑M1/143‑58 (MQ=255)                                                               tCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCGGGTGGGGTAAAGCGCCAGGGCCGGAAGTCGATACGAACTGTGCTCTg                                                                                >  2:227350/1‑143 (MQ=255)                                                                cGTTAGCTGGGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGGGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGa                                                                               <  2:93341/143‑1 (MQ=255)                                                                  ttAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGAtt                                                                             >  1:349524/1‑143 (MQ=255)                                                                    agcTGTGTCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCa                                                                           <  2:404679/141‑1 (MQ=255)                                                                       ggtgGCAGTGTCCCGCGTTCAGACGGCGAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCTGAAGTCGATACGACCTGTGCTATGATTCATaa                                                                        <  2:423356/142‑1 (MQ=255)                                                                         tgGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGCTACGACCTGTGCTATGACTCCTAAAt                                                                      >  1:581769/1‑143 (MQ=255)                                                                         tgGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAAt                                                                      <  2:452637/143‑1 (MQ=255)                                                                           gCAGTATCCCGCGTTCAGAAGGCAAGGCGTGGCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATca                                                                    <  2:79430/143‑1 (MQ=255)                                                                            cAGTATCCCGCGTTCAGAAGGCAAGGCGTGTGGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTAGCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATcac                                                                   <  2:260872/143‑1 (MQ=255)                                                                            cAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATcac                                                                   <  1:440423/143‑1 (MQ=255)                                                                             aGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATcaca                                                                  <  1:790205/143‑1 (MQ=255)                                                                              gTATCCCGCGTTCAGAAGGCATGGCGTGTCGGGTGTTTGATCTGCGCTATATTGTTGGTGCCTGACTTATTGTTTGGTTTTGGTGGGGTAAAGCGCCAGGGACAGAAGTCGATACGACCTGTGCTATGATTCATAAATCacaa                                                                 <  1:77596/143‑1 (MQ=255)                                                                                 tCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCAcaacaa                                                              >  1:17031/1‑143 (MQ=255)                                                                                 tCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCAcaacaa                                                              >  1:24970/1‑143 (MQ=255)                                                                                    cgcgTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTAGCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGGTTCATAAATCACCACAATaa                                                           >  1:221478/1‑143 (MQ=255)                                                                                           aGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGa                                                    >  1:688565/1‑143 (MQ=255)                                                                                            gAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAACTCACAACAATAACAACAGAc                                                   >  2:493950/1‑143 (MQ=255)                                                                                             aaggcaaggcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATCACAACAGACt                                                  >  1:28114/1‑143 (MQ=255)                                                                                                gcaaggcGTGTCGGGTGTTTGAGCTGCGCAATATTGTTGGGGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGaa                                               <  1:395849/143‑1 (MQ=255)                                                                                                     gcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTCACGCATCGTCTGGCTCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGaa                                          <  2:408449/143‑1 (MQ=255)                                                                                                        tgtCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGa                                       <  1:397058/143‑1 (MQ=255)                                                                                                        tgtCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGACCGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACCGACTGAAGCGAATgc                                       >  2:298591/1‑142 (MQ=255)                                                                                                              gtgtTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAAc                                 <  1:659294/143‑1 (MQ=255)                                                                                                                    gATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGCAGTCGATACGACCTGTGCTCTGACTCATAAATCCCAACCATAACAACAGACTGAAGCGAAGGCGCAAACATGATa                           >  2:82144/1‑143 (MQ=255)                                                                                                                     aTCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATAc                          >  1:519375/1‑143 (MQ=255)                                                                                                                      tCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACt                         >  1:7680/1‑143 (MQ=255)                                                                                                                      tCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGAGACAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACt                         >  1:360134/1‑143 (MQ=255)                                                                                                                       cTGCGCAATATTGTTGGTGCCTGCCGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACtt                        <  1:441573/143‑1 (MQ=255)                                                                                                                               tatTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCaa                <  2:349524/143‑1 (MQ=255)                                                                                                                                   gtgggTGCCGGGCGTAGCGTCAGGCCCCGGTGGGGTAAAGCGCCAGGGACAGACGACCCTACGACCAGTGCGATGATTCATAAATCACAACAATAACAACAGATTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATg            <  2:14578/140‑1 (MQ=255)                                                                                                                                     gggTGCCGGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCt          <  1:608014/142‑1 (MQ=255)                                                                                                                                       gTGCCTGCCGTATCGTCTGGCCCTTGGGGGGTAAAGCGCCTGGGCCAGAAGTCGATACGATCTGTGCTATGATTCATAAATCACAACAATAACAGTAGTCTTGTTCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGt        <  2:657401/143‑1 (MQ=255)                                                                                                                                          ccTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGTcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatactgccacagttaacgatcatcac     <  1:236210‑M2/143‑87 (MQ=255)                                                                                                                                             gACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGc  <  1:612261/143‑1 (MQ=255)                                                                                                                                             |                                                                                                                                               GGTATGCCACCAGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGC  >  NC_000913/1463297‑1463579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.