New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3603658 =	48 (1.170)	3 (0.080)	3/250	NT	6.4%	coding (586/1494 nt)	ftsY	signal recognition particle receptor
	?	NC_000913	3603682 =	43 (1.110)					coding (562/1494 nt)	ftsY	signal recognition particle receptor

AGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGC  >  NC_000913/3603540‑3603823                                                                                                                                               |                                                                                                                                              aGCTGCTCTGCCAGCTCCTCAAACAGCGCATCGTCGATTGTTGGACCGCGGAACAGACAGATCAACCCGGAACCGAGATTTTCTTTGGTTTTTAACACGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTc                                                                                                                                               <  1:29927/143‑1 (MQ=255)             gaagagctggaaacggcgctggctgccgaagcggcagaagaggcggtgatggtggttcctccggcagaagaagagcagccggtggaagaaatcgctcaggagcaggAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGc                                                                                                                                   >  1:781370‑M1/107‑143 (MQ=255)                gagctggaaacggcgctggctgccgaagcggcagaagaggcggtgatggtggttcctccggcagaagaagagcagccggtggaagaaatcgctcaggagcaggAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGAt                                                                                                                                >  1:529435‑M1/104‑143 (MQ=255)                   cgggaatcggcgcgggctcccgaaggggccgcagaggcggtgattgcggttcctccggcagaagaggaccagccggtggatgaaatcgctcaggagcaggAAACACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATttc                                                                                                                             >  2:122086‑M1/101‑143 (MQ=255)                     aaaCAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAGATCCGGAACCGAGATTTTCTTTGGTTTGTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATttctt                                                                                                                           <  1:220723/143‑1 (MQ=255)                     aaaCAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATttctt                                                                                                                           <  1:630765/143‑1 (MQ=255)                                  tcgATTTTTTTACCGCGGAACAGGCTGATAATTCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGctc                                                                                                              >  1:744727/1‑143 (MQ=255)                                     aTTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGCTTTTCTTTGGGTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAGACCTTCTTTGGTCGGGGTTTCTTGCTCCTGAGCGGGTTGTTTCACCggcggcggttc                                                                                                           >  1:276246/1‑138 (MQ=255)                                     aTTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCtcttc                                                                                                           <  2:201026/143‑1 (MQ=255)                                     aTTGTTTTACCGCGGACCAGGTTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCtcttc                                                                                                           <  2:43250/143‑1 (MQ=255)                                         ttttACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCtcttcttct                                                                                                       <  1:415206/143‑1 (MQ=255)                                           ttACCGCGGAACAGGCTGCTAAAGCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGc                                                                                                     <  1:507/143‑1 (MQ=255)                                            tACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTCCTTTGGTCGGTTTTCCCTGCTCCTGCGCCAGTTCTTCCACCGGCTGCTCTTCACCTGcc                                                                                                    >  2:462291/1‑143 (MQ=255)                                               cgcgGAACAGGCTGATGGATCCGGAACCGAGATTTTCTTTGGTGGTTAACGGGGTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCggg                                                                                                 >  2:445289/1‑142 (MQ=255)                                               cgcgGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCgga                                                                                                 >  1:463928/1‑143 (MQ=255)                                               cgcgGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCgga                                                                                                 <  1:672380/143‑1 (MQ=255)                                               cgcgGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGCCTGCTCTTCTTCTGCCgga                                                                                                 >  2:171689/1‑143 (MQ=255)                                                 cgGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTTCGTTTCAGGCGCGCGAAGAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCggagg                                                                                               >  2:33188/1‑143 (MQ=255)                                                    aaCCGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTCTAACAGGCTGCGTTCCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAac                                                                                            <  1:57384/143‑1 (MQ=255)                                                    aaCAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCGTCTTCAGCCGGAGGAac                                                                                            >  1:498745/1‑143 (MQ=255)                                                       acgCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGCTTTCTTCCCACGGCTGCTCTTCTTCTGCCGGAGGAaccac                                                                                         <  1:808520/141‑1 (MQ=255)                                                                 aTCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGcc                                                                               >  2:597921/1‑143 (MQ=255)                                                                  tCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTGTTCTGCCGGGGGAACCACCATCACCCCct                                                                              >  2:806257/1‑143 (MQ=255)                                                                  tCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCct                                                                              >  1:488152/1‑143 (MQ=255)                                                                          cGAGTTTGTCTTTGGCTTGTGTCAGGCTGCGTGTCAGGCGCGCGACAAAACCTTCTTTGGTCGGGTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGcc                                                                      <  2:24077/143‑1 (MQ=255)                                                                          cGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGcc                                                                      <  2:596533/143‑1 (MQ=255)                                                                            agaTTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCAGCGGCTGTTCTTCTTCTGCCGGAGGTACAACCATCACGGCCTCTTCTGACGc                                                                    >  2:307163/1‑143 (MQ=255)                                                                              aTTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCgaag                                                                  <  2:313754/143‑4 (MQ=255)                                                                                 ttCGTTGGTTTTTAACAGGCTGCGGTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCgg                                                               <  2:749809/143‑1 (MQ=255)                                                                                   cgttGGTTGTTAACAGGCTGCGTTTCAGGCGCGCGAAAAACCCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGca                                                             <  1:648627/141‑1 (MQ=255)                                                                                   cTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGca                                                             <  1:701352/143‑1 (MQ=255)                                                                                      tGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCGTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCCTCACCGCCTCTTCTGCCGCTTCGGcagcc                                                          >  2:452477/1‑143 (MQ=255)                                                                                       ggTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTATTTGGTCGGTTTTTCATGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACAGAATCTTCGGGCGCGTCGGcatcca                                                         >  2:336246/1‑143 (MQ=255)                                                                                              aaCAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGt                                                  <  1:696880/143‑1 (MQ=255)                                                                                                cAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAGCCACCCTCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCggta                                                >  1:457561/1‑140 (MQ=255)                                                                                                  tgCTGCGTGTCAGGCGTGCGACAACACCTTCGTTGGTCGGTGTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTcc                                              <  2:276246/142‑1 (MQ=255)                                                                                                   gCTGCGTTGCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCa                                             <  1:175483/143‑1 (MQ=255)                                                                                                    gaaatcgctcaggagcaggaaaaaccgaccaaagaaggtgtttCCTGCTCCTGAGCGATTTCATCCACCGGCTGGTCCTCTTCTGCCGGAGGAACCGCAATCACCGCCTCTGCGGCCCCTTCGGGAGCCCGCGCCGAttcccg                                            >  2:122086‑M2/44‑141 (MQ=255)                                                                                                     tGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTCCTCTTCTTCTGCCGGAGGAACCACCCTCCCCGCCTCCTCTGCCGCTTCGGAAGCCAGCGCCGCTTCCacc                                           >  1:70127/1‑141 (MQ=255)                                                                                                       atcgctcaggagcaggaaaaaccgaccaaagaaggtttttCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGctc                                         >  1:529435‑M2/41‑143 (MQ=255)                                                                                                          gctcaggagcaggaaaaaccgaccaaagaaggtttttCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTtc                                      >  1:781370‑M2/38‑143 (MQ=255)                                                                                                            ccgcggcgcgAAAAATGCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCGGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTtcgt                                    <  1:192601/138‑1 (MQ=255)                                                                                                            cAGGCGCGCGTAAAAACCTTCTGTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTtcgt                                    <  2:86209/143‑1 (MQ=255)                                                                                                            cAGGCGCGCGAAGAATCCTTCTTTGGTCGGTTTTTCCTGCTCCGGAGCGATTGCTTCCACCGGCTGCTCTTCTGCTGCCGTAGGAACCACCATCAGCGCCGCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTtcgt                                    <  2:183334/143‑1 (MQ=255)                                                                                                             atgcgcgaGAAAAAACCGTCGTTGGTCGGTTTCTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTtcgtc                                   <  1:452053/141‑1 (MQ=255)                                                                                                             aGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCCCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTtcgtc                                   <  1:708708/143‑1 (MQ=255)                                                                                                                cgcgcgAACAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGt                                <  2:626039/143‑1 (MQ=255)                                                                                                                    cgAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCCGCGCCGTTTCCCGCTCCTCGTCGGTACtt                            >  2:692178/1‑143 (MQ=255)                                                                                                                           ACCTTCTCTCGTCGGTCGTTCCTGCCCCTGAGCGCTTTCTTCCACCGGCTGCCCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCGGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTcttctt                     >  1:13599‑M1/1‑143 (MQ=255)                                                                                                                             CTTCTTTCGTCGCTTTCTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTa                   >  1:393485‑M1/1‑143 (MQ=255)                                                                                                                              ttcttTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACTGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAg                  >  2:650859/1‑143 (MQ=255)                                                                                                                                cttTGGTCGGTTGTGCCTGCTCCTGAGGGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGcc                <  2:27452/143‑1 (MQ=255)                                                                                                                                  ttgttccgtttttCCTGCTCCTGAGCGATTTCTTCCCCCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGc              <  2:498798‑M2/130‑1 (MQ=255)                                                                                                                                              tCCCGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGc  <  1:445289‑M2/142‑1 (MQ=255)                                                                                                                                               |                                                                                                                                              AGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGC  >  NC_000913/3603540‑3603823

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.