| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 918154 | 21 (0.730) | 4 (0.140) | 4/264 | NT | 17.0% | coding (967/993 nt) | ybjX | DUF535 domain‑containing protein YbjX |
| ? | NC_000913 | = 918201 | 18 (0.630) | coding (920/993 nt) | ybjX | DUF535 domain‑containing protein YbjX | |||||
ATTGAAGTGGCAATGGAGGCAGGACGTCGTGGTGTGGACTCCGTACCGACGCTGCTG‑AAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAGCATCACATACGCCGCCAAC > NC_000913/918024‑918289 | aTTGAAGTGGCAATGGAGGCAGGACGTCGTGGTGTGGACTCCGTACCGACGCTGCTG‑AAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGc > 1:65639/1‑143 (MQ=255) ggAAGTGGCAATGGAGGCAGGACGTCGTGGTGTGGACGCCGTACCGACGCTGCTG‑AAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGt < 1:234362/142‑1 (MQ=255) aGTGGCAATGGAGGCCGGACGTCGCGGTGTGGACTCCGTACCGACGCTGCTG‑AAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGa < 1:2137/143‑1 (MQ=255) aTGGAGGCAGGACGTCGTGGTGTGGACTCCGTACCGACGCTGCTG‑AAAAACATGTTCTCACGCGTGCTGTGACTGGCGCGCGGCCGCGCGGATTAACCGCGAAACATCGTGGCCACTTGTGGCTGAATCGCGCCGAGCCtctc > 2:564187/1‑143 (MQ=255) gggCAGGGCGTCGTGGTGTGGGCTCCGCACCGACGCTGCTGAAAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATa < 1:73093/142‑1 (MQ=255) gACGTCGTGGTGTGGACTCCGTACCGACGCTGCTG‑AAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGa > 1:516230/1‑143 (MQ=255) gtcgtGGTGTGGACTCCGTACCGACGCTGCTG‑AAAAAAATGTTCTCCCGCAGTCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGtggctgaatagcgtcggcgctatgagatgctcgacgc < 1:538441‑M1/143‑38 (MQ=255) gtggtgTGGACTCCGTACCGACGCTGCTG‑AAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGCGGCCATTTGTGGCTGCATAGCGTCGAGCATCTCATAGCGCCGCCGGTac > 2:560971/1‑142 (MQ=255) tgtgGACGCCGTACCGACGCTGCTG‑AAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGtggctgaataccgtcggcgctatgagatgctcgacgctattcag < 2:285913‑M1/143‑45 (MQ=255) gACTCCGTACCGACGCTGCTG‑AAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCg > 2:286286/1‑143 (MQ=255) gACTCCGTACCGACGCTGCTG‑AAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCGCATAGCGCCGACGGTATTAAGCCCg > 1:72005/1‑143 (MQ=255) ccGACGCTGAGG‑AAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTCTTTTACt < 1:87979/143‑1 (MQ=255) ctg‑AAAAAAATGTTCTCACGCGTGGTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAACATCTCATAGCGCCGACGGTATTCAGCTCGTTTTTTACTGGCGATTTc < 2:185055/143‑1 (MQ=255) g‑AAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTTTTTGACTGGCGATTTCgg > 2:395123/1‑143 (MQ=255) aTGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGgggctgaataccgtcggcgctatgagatgctcgacgctattcagccacaaatg > 2:7449‑M1/1‑68 (MQ=255) aTGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGgggctgaataccgtcggcgctatgagatgctcgacgctattcagccacaaatg < 1:7449‑M1/121‑54 (MQ=255) aTGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGCCTGAATAGCATCGCGCCTCTCATAGCGCCTACGGTATTCAGCCCGTTTATAACTGGCAAATTAGCCAAtctc > 1:69530/1‑143 (MQ=255) cttaCGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTc < 1:14598/140‑1 (MQ=255) cgagcgcgGGCAGCGGCGGGCGCGCGGTGGCGCGGAGTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTc < 1:17617/139‑1 (MQ=255) tgtgGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCtgt > 1:207432/1‑143 (MQ=255) cgcgcgGATGAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATg < 2:540675/143‑1 (MQ=255) ttAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCGCATAGCGCCGACGGTATTCAGCCCGTTTTGTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAg < 2:254240/143‑1 (MQ=255) cgcaaCCTCGTGGCCGTTGGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGGCGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAGCATcaca < 2:65639/140‑1 (MQ=255) tCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAGCATCACATAcgccg < 1:421306/143‑1 (MQ=255) gCCATCTGTGGCTGAATAGCGTCGAGCATCTCCTAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAGCATCACATACGCCGCCAAc < 1:369352/143‑1 (MQ=255) cATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCcaaatggccacgatgtttcgcggttaatccgcgcgaccgcgcgccagccacagcacgcgtgagaacat < 1:7449‑M2/121‑69 (MQ=255) cATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCcaaatggccacgatgtttcgcggttaatccgcgcgaccgcgcgccagccacagcacgcgtgagaacat > 2:7449‑M2/1‑53 (MQ=255) | ATTGAAGTGGCAATGGAGGCAGGACGTCGTGGTGTGGACTCCGTACCGACGCTGCTG‑AAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAGCATCACATACGCCGCCAAC > NC_000913/918024‑918289 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |