| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 918154 | 21 (0.730) | 4 (0.140) | 4/264 | NT | 17.0% | coding (967/993 nt) | ybjX | DUF535 domain‑containing protein YbjX |
| ? | NC_000913 | = 918201 | 18 (0.630) | coding (920/993 nt) | ybjX | DUF535 domain‑containing protein YbjX | |||||
GACTCCGTACCGACGCTGCTGAAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAGCATCACATACGCCGCCAACCGATTCCCAGAAAGCGTTGTAATCAGCGTGGATCTTGCCTTCTTTATCGCGAT > NC_000913/918060‑918342 | gACTCCGTACCGACGCTGCTGAAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCg > 2:286286/1‑143 (MQ=255)gACTCCGTACCGACGCTGCTGAAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCGCATAGCGCCGACGGTATTAAGCCCg > 1:72005/1‑143 (MQ=255) ccGACGCTGAGGAAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTCTTTTACt < 1:87979/143‑1 (MQ=255) ctgAAAAAAATGTTCTCACGCGTGGTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAACATCTCATAGCGCCGACGGTATTCAGCTCGTTTTTTACTGGCGATTTc < 2:185055/143‑1 (MQ=255) gAAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTTTTTGACTGGCGATTTCgg > 2:395123/1‑143 (MQ=255) aTGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGCCTGAATAGCATCGCGCCTCTCATAGCGCCTACGGTATTCAGCCCGTTTATAACTGGCAAATTAGCCAAtctc > 1:69530/1‑143 (MQ=255) cttaCGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTc < 1:14598/140‑1 (MQ=255) cgagcgcgGGCAGCGGCGGGCGCGCGGTGGCGCGGAGTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTc < 1:17617/139‑1 (MQ=255) tgtgGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCtgt > 1:207432/1‑143 (MQ=255) cgcgcgGATGAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATg < 2:540675/143‑1 (MQ=255) ttAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCGCATAGCGCCGACGGTATTCAGCCCGTTTTGTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAg < 2:254240/143‑1 (MQ=255) cgcaaCCTCGTGGCCGTTGGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGGCGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAGCATcaca < 2:65639/140‑1 (MQ=255) tCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAGCATCACATAcgccg < 1:421306/143‑1 (MQ=255) gCCATCTGTGGCTGAATAGCGTCGAGCATCTCCTAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAGCATCACATACGCCGCCAAc < 1:369352/143‑1 (MQ=255) cATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCcaaatggccacgatgtttcgcggttaatccgcgcgaccgcgcgccagccacagcacgcgtgagaacat > 2:7449‑M2/1‑53 (MQ=255) cATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCcaaatggccacgatgtttcgcggttaatccgcgcgaccgcgcgccagccacagcacgcgtgagaacat < 1:7449‑M2/121‑69 (MQ=255) ggCGGAAAAGCGACGAGCATCTCAGAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAGCATCACATACGCCGCCAACCGATTCCCa < 1:38621/143‑1 (MQ=255) cTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCAcaaatggccacgatgtttcgcggttaatccgcgcgaccgcgcgccagccacagcacgcgtgagaacatttttttcagcagcgtcggtacggcgtccaca < 2:285913‑M2/143‑100 (MQ=255) tAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTGAGCATCACATACGCCGCCACCCCATTCCCCGCAAGcc > 2:180150/1‑142 (MQ=255) gCGTCGAGCATCTCATAGCGCCGACGCTATTCAGCCAcaaatggccacgatgtttcgcggttaatccgcgcgaccgcgcgccagccacagactgcgggagaacatttttttcagcagcgtcggtacggagtccacaccacgac < 1:538441‑M2/143‑107 (MQ=255) tCGAGCATCTCATAGCGCCGACGGGATTCAGCCCGTGTTGTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATGTGTGCTGGACGGCGGTAATGGCGGTCAGCATCACATACGCCGCTGTCCGGTTCCCAGTAAGCGTGGtg > 2:90631/1‑142 (MQ=255) ctcATAGCGCCGACGGTATTAAGCCCGTTTTTTACTTGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGAAAGGCGGTAATGGCGTTCAGCATCACATACGCCGCCAACCGATTCCCAGAACGCGGTGTCAGCCGCGt > 1:39872/1‑143 (MQ=255) ggTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAGCATCACATACGCCGCCAACCGCTTCCCAGAAAGCGTTGTAACCAGCGTGGATCTCGCcctct > 2:106277/1‑143 (MQ=255) ttCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAGCATCACAAACGTCGCCAACCTATTCCCAGAAAGCGTTGTAATCAGCGTGGATCTTGCCTTCTTTAt < 1:478988/143‑1 (MQ=255) cccGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAGCATCACATACGCCGCCAACCGATTCCCAGAAAGCGTTGTAATCAGCGTGGATCTTGCCTTCTTTATCGCGa < 2:243144/143‑1 (MQ=255) cccGGTTTTTGCTGGCGATTTGGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAGCATCACATACGCCGCCAACCGATTCCCAGAAAGCGTTGTAATCAGCGTGGATCTTGCCTTCTTTATCGCGa < 2:72005/143‑1 (MQ=255) ccGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAGCATCACATACGCCGCCAACCGATTCCCAGAAAGCGTTGTAATCAGCGTGGATCTTGCCTTCTTTATCGCGAt > 1:169442/1‑143 (MQ=255) | GACTCCGTACCGACGCTGCTGAAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAACCGCGAAACATCGTGGCCATTTGTGGCTGAATAGCGTCGAGCATCTCATAGCGCCGACGGTATTCAGCCCGTTTTTTACTGGCGATTTCGGCAATCTCTTTTCGTGCTATCTGTGCTGGAAGGCGGTAATGGCGTTCAGCATCACATACGCCGCCAACCGATTCCCAGAAAGCGTTGTAATCAGCGTGGATCTTGCCTTCTTTATCGCGAT > NC_000913/918060‑918342 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |