New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2894073 =	23 (0.800)	3 (0.110)	3/256	NT	11.9%	coding (155/261 nt)	ygcO	putative 4Fe‑4S cluster‑containing protein
	?	NC_000913	2894099 =	22 (0.790)					coding (181/261 nt)	ygcO	putative 4Fe‑4S cluster‑containing protein

CGTAATCTCTGGCGCGTTGCTGATGCGCCGCACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGCGACGAATCAACACTACAACAGTGGCGCTATCCGCCTTCCGGATTCGGCATCACCTACCGCTTTGGATAAATAATAAGGATAATTTATGCCC  >  NC_000913/2893931‑2894201                                                                                                                                               |                                                                                                                                 cGTAATCTCTGGCGCGTTGCGGATGCGCCGCACATTGTTCCGGCTGACTCCGCTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCg                                                                                                                                  <  2:19558/143‑1 (MQ=255)    agcaatcaccggattctggcggagcaggtgtaagaggggcataaattatccttattatttatccaaagcggtaggtgatgccgaatccggaaggcggatagcgccactgttgtagtgttgattcgtcgcacagcaaacgGCAg                                                                                                                               <  1:305601‑M1/4‑1 (MQ=255)     aTCTCTGGCGCGTTGCTGATGCGCCGCACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGt                                                                                                                              <  1:235593/143‑1 (MQ=255)         ctGGCGCGTTGCTGATGCGCCGCACATTGTTCCGGCTGACTCCGTTGAACGCCAGACGGCACAACGGTTGCTTAACGCCTGTCCGGCAGGTCTCCTTTCGCTCACACCGGAAGGTAACTTACGTCTTGACTAACGCAGTTGcc                                                                                                                          >  2:122216/1‑143 (MQ=255)                    cTGATGCGCCGCACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTTGAGTGTGGc                                                                                                               >  1:418322/1‑143 (MQ=255)                     tGATGCGCCGCACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACATACGTATTGACGATCACAGTTACCTGGAgagtagaa                                                                                                              >  2:439737/1‑139 (MQ=255)                       aTGCGCCGCACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGCAGGTAACTTACGCACTGACTATCGCACTCGCCTGGAGTGTGGCAcc                                                                                                            >  2:523831/1‑143 (MQ=255)                        tGCGCCGCACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGGAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCt                                                                                                           >  1:293024/1‑143 (MQ=255)                           gccgcACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTCCCTGGAGTGTGGCACCTGcc                                                                                                        >  2:278269/1‑143 (MQ=255)                               gtgtaggaggggcataaagtatccttgttattgatccaaagcggtaggtgatgccgaatccggaaggcggagagcggcactgttgtagtgttgattcgtcgcacagcaaacgGCAGTTGCCTGGAGTGTGGCACCTGCCGttt                                                                                                    >  2:213222‑M1/113‑143 (MQ=255)                                    tGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGCCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCtgt                                                                                               <  1:550877/143‑1 (MQ=255)                                      ttCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGc                                                                                             >  2:422381/1‑143 (MQ=255)                                          ggCGGACGCCGTTGAGCGCCAGACGGCAGAACGGTTGATTGACGCCGCTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGcgacg                                                                                         <  2:443970/143‑1 (MQ=255)                                              gACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACGATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGCGACGAATc                                                                                     <  2:515441/143‑1 (MQ=255)                                                cTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGCGCGGGGCCCCTGCCGGTTGCTGCGCCCCGAATCaa                                                                                   >  2:511673/1‑143 (MQ=255)                                                cTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGCGACGAATCaa                                                                                   >  1:455692/1‑143 (MQ=255)                                                 tCCGTTGCGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGCGACGAATCAac                                                                                  <  2:13392/143‑1 (MQ=255)                                                     gataGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGCGACGAATCAACACTa                                                                              >  2:69982/4‑143 (MQ=255)                                                        aGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGCGACGAATCAACACTacaa                                                                           >  2:504047/1‑143 (MQ=255)                                                                      gAACGGTTGATTAGCGCATGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGCGACGAATCAACACTACAACAGTGGCGCTATcc                                                             <  2:570038/143‑1 (MQ=255)                                                                        aCGGGTGGTTAACGCCTGTGCGGGAGGGCTTTTTTCGCTCACACCGGAAGGTCACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGCGACGAATCAACACTACAACAGTGGCGCTATCCGc                                                           <  2:368606/143‑1 (MQ=255)                                                                               aTTAACGCCTGTCCGGCAGGTCTTTTTTGGGGCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGCGACGAATCAACACTACAACAGTGGCGCTAACCGCCTTCggg                                                    >  2:556994/1‑143 (MQ=255)                                                                                            ggaaggcggatagcgccactgttgtagtgttgattcgtcgcacagcaaacgGCAGTTGCCTGGAGTGTGGCACCTGcc                                                                                                        <  2:230683‑M1/27‑1 (MQ=255)                                                                                            ggaaggcggatagcgccactgttgtagtgttgattcgtcgcacagcaaacgGCAGTTGCCTGGAGTGTGGCACCTGcc                                                                                                        >  1:230683‑M1/52‑78 (MQ=255)                                                                                                   tCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGCGACGAATCAACACTACAACAGTGGCGCTATCCGCCTTCCGGATTCGGCATCACCTACCGcc                                >  2:169957/1‑142 (MQ=255)                                                                                                   tCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGCGACGAATCAACACTACAACAGTGGCGCTATCCGCCTTCCGGATTCGGCATCACCTACCGCt                                >  1:324790/1‑143 (MQ=255)                                                                                                      tttttCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGCGACGAATCAACACTACAACAGTGGCGCTATCCGCCTTCCGGATTCGGCATCAGCTACCGCTTTg                             >  1:331196/1‑143 (MQ=255)                                                                                                                  acCGGAAGGTGACTTACTTATTGACTATCGCGGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGCGACGAAGCAACACTACAACAGTGGCGCTATCCGCCTTCCTGATTCGGCATCACCTACCGCTTTGGATAAAtaataa                 <  2:482123/143‑1 (MQ=255)                                                                                                                                 aCGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGCGACGAATCAACACTACAACAGTGGCGCTATCCGCCTTCCGGATTCGGCATCACCTACCGCTTTGGATAAATAATAAGGATAATTTATGccc  >  1:162904/1‑143 (MQ=255)                                                                                                                                               |                                                                                                                                 CGTAATCTCTGGCGCGTTGCTGATGCGCCGCACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGCGACGAATCAACACTACAACAGTGGCGCTATCCGCCTTCCGGATTCGGCATCACCTACCGCTTTGGATAAATAATAAGGATAATTTATGCCC  >  NC_000913/2893931‑2894201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.