New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 354605	NA (NA)	5 (0.180)	4/250	NT	NA	noncoding (6/28 nt)	other	REPt26a
	?	NC_000913	= 354653	NA (NA)					noncoding (13/36 nt)	other	REP26b

GAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTT  >  NC_000913/354512‑354795                                                                                                                                              |                                                                                                                                               gAATGACTCGATACTGGAGATCTGACGACAAGGGATGATGCTGCGTCGGTGGAGCAGATCCGCGAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCt                                                                                                                                               <  1:215795/143‑1 (MQ=255)  aaGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTg                                                                                                                                              >  2:158145/1‑143 (MQ=255)    ggACGCGATCCTGGACATCTGCCGACCATTGATGATCCTGCGGCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGAc                                                                                                                                            <  2:82931/143‑1 (MQ=255)        gcgATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGACGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGCTGGCTCATGCGTCGCTGACGCGt                                                                                                                                        >  1:325117/1‑143 (MQ=255)         cgATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGtt                                                                                                                                       <  2:370214/143‑1 (MQ=255)              cTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTCGGTTATTGTCGGATGCGTCGCGCGGTGCATCNGGCGCTGTGTGGAGATGCCTGATGCGACGCCGAcgcggtgtgta                                                                                                                                  >  2:266571/1‑136 (MQ=255)               tGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCa                                                                                                                                 >  1:476762/1‑143 (MQ=255)                  agaTCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGc                                                                                                                              >  1:123214/1‑143 (MQ=255)                    aTCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCt                                                                                                                            >  1:118387/1‑143 (MQ=255)                                  gatgatCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTCCGGAcccgccccg                                                                                                              >  1:90138/1‑136 (MQ=255)                                      gtcgcgCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAgg                                                                                                          <  1:179643/138‑1 (MQ=255)                                              tcgtTGGATCAGATCCGCCAGGCGATGGAAGAGGATGTTATTGTCGGATGTATTGTGGGTAGCAGTCAGAACTAATTGCATATTCCTGATACTACGCTTACGCGATTTATCATGCCTACGGACCTAAACCGTAGGTCCGATaa                                                                                                  >  2:253522/1‑143 (MQ=255)                                               cgtGGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAg                                                                                                 <  1:550001/143‑1 (MQ=255)                                                    gATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCt                                                                                            >  2:378863/1‑143 (MQ=255)                                                          aTCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTc                                                                                      <  1:355867/143‑1 (MQ=255)                                                            ccGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGAGACACTGACGCGTTTTATCATGCCTACGGACGTGAACGGTAGGTCGGATAAGGCGGTcgcgcacc                                                                                    >  1:569143/1‑139 (MQ=255)                                                                    cggttgAAGTGTGGGGTATTGTCGGATGCGTCGCGCGGTGCTTCCGGCACTGTCTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCCTGCCTTCGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGaca                                                                            <  2:191046/138‑1 (MQ=38)                                                                    cGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGaca                                                                            <  1:182142/143‑1 (MQ=255)                                                                      aTGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACAcc                                                                          >  1:473130/1‑143 (MQ=255)                                                                                  gTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGTCACCCTGCTCCGATGc                                                              >  1:181806/1‑143 (MQ=255)                                                                                    gacggTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCt                                                            <  1:167333/139‑1 (MQ=255)                                                                                       tGTCGGAGGCGTCGCGCGGTGCAACCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGAt                                                         <  1:234901/143‑1 (MQ=255)                                                                                         tCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGc                                                       >  2:494952/1‑143 (MQ=255)                                                                                            gATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCatccgacaataacctactcttccatcgcctggcggatccgacccaacaacgcgggatcataactggtcgtcagctgtcccggcgcgcggcct                                                    <  2:261376‑M2/143‑93 (MQ=255)                                                                                             aTGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACg                                                   <  1:57796/143‑1 (MQ=255)                                                                                               gCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCatccgacaataacctactcttccatcgcctggcggatctgatccaacgacgcaggatcatcaatggtcgtcagatctcccggctcgcgtcctccc                                                 <  2:302366‑M2/143‑96 (MQ=255)                                                                                                 gTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCatccgacaataacctactcttccatcgcctggcggatctgatccaacgacgcaggaccatcaattgtcgtcagatctccaggatcgcgtccttcgca                                               <  2:113621‑M2/143‑98 (MQ=255)                                                                                                           ccATCCGGGACGGTGGGCCGAGGCCTGATGCGACGCTGACGCGTTTCATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCCCGCTTCGCATCCGACACCATGCTCAGATGCCAGATGCGACGCTGACGCGTCTTAt                                     <  1:266571/142‑1 (MQ=38)                                                                                                              tCCGGCACTGTGTGCCGATGCCTGATGCGACGCatccgacaataacctactcttccatcgcctggcggatctgatccaacgacgcaggatcatcaatggtcgtcagatctccaggatcgcgtccttcgcaaatcgcctggatc                                  <  1:360815‑M2/143‑111 (MQ=255)                                                                                                              tCCGGCACTGTGTGCCGATGCCTGATGCGACGCatccgacaataacctactcttccatcgcctggcggatctgatccaacgacgcaggagcatcaatggtcgtcaggtctccgggagcgcgtccttcgcaaagcgcctggatc                                  <  1:84178‑M2/143‑111 (MQ=255)                                                                                                                          tgCCGCTGCCTGATGCGACGCTGACGCGTTTTATCATGCATACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTg                      <  1:237637/143‑1 (MQ=255)                                                                                                                                ggCCGGATGCGACGGTGCCGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCAGGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTa                <  2:10079/142‑1 (MQ=255)                                                                                                                                      aTGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGa          <  1:498911/143‑1 (MQ=255)                                                                                                                                              catccgacaataacctactcttccatcttctggtggatctgatccaacgacgcaggatcatcaatggtcgtcagatctccaggatcgcgtccttcgcaaatcgcctggatcgtgcggcgcagcacttttccggatcgcgtttg  <  2:498163‑M2/143‑143 (MQ=255)                                                                                                                                              catccgacaataacctactcttccatcgcctggcggatctgatccaacgacgcaggaacatcaatggtcgtcagatctccaggatcgcgtccttcgcaaatcgcctggatcgtgcggcgcagcatcgttcccgatcgcgtttt  <  1:30266‑M2/143‑143 (MQ=255)                                                                                                                                              |                                                                                                                                               GAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTT  >  NC_000913/354512‑354795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.