breseq  version 0.35.4  revision f352f80f4bc9 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Marginal new junction evidence (sorted from low to high skew)
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 572411	477 (16.610)	6 (0.220)	6/250	NT	1.6%	coding (44/102 nt)	ylcH	DLP12 prophage; uncharacterized protein YlcH
	?	NC_000913	= 572431	296 (10.890)					coding (64/102 nt)	ylcH	DLP12 prophage; uncharacterized protein YlcH
*	?	NC_000913	572405 =	522 (18.170)	6 (0.270) +31 bp	6/202	NT	1.5%	coding (38/102 nt)	ylcH	DLP12 prophage; uncharacterized protein YlcH
	?	NC_000913	= 1095504	NA (NA)					intergenic (‑67/‑40)	insE‑4/ymdE	IS3 element protein InsE/protein YmdE
*	?	NC_000913	570695 =	1192 (41.500)	25 (0.920)	15/250	NT	2.3%	intergenic (+267/‑198)	ybcK/ybcL	DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL
	?	NC_000913	570719 =	1039 (38.210)					intergenic (+291/‑174)	ybcK/ybcL	DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL
*	?	NC_000913	570627 =	1487 (51.770)	7 (0.270)	4/238	NT	0.54%	intergenic (+199/‑266)	ybcK/ybcL	DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL
	?	NC_000913	570677 =	1219 (47.110)					intergenic (+249/‑216)	ybcK/ybcL	DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL
*	?	NC_000913	568678 =	1461 (50.860)	18 (0.660)	12/250	NT	1.3%	intergenic (+31/‑17)	emrE/ylcJ	multidrug/betaine/choline efflux transporter EmrE/protein YlcJ
	?	NC_000913	568704 =	1376 (50.610)					coding (10/150 nt)	ylcJ	protein YlcJ
*	?	NC_000913	568559 =	1359 (47.310)	42 (1.530)	17/252	NT	3.2%	coding (245/333 nt)	emrE	multidrug/betaine/choline efflux transporter EmrE
	?	NC_000913	568576 =	1285 (46.880)					coding (262/333 nt)	emrE	multidrug/betaine/choline efflux transporter EmrE