New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1497378 =	32 (1.150)	4 (0.150)	3/250	NT	10.5%	coding (523/1656 nt)	opgD	glucan biosynthesis protein D
	?	NC_000913	1497422 =	38 (1.440)					coding (567/1656 nt)	opgD	glucan biosynthesis protein D

GGCGCGTGAAATTCACTTTCGCCCGGAGTTGTTCAAATACAACGATGCAGGTGTTGATACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATAC  >  NC_000913/1497236‑1497517                                                                                                                                               |                                                                                                                                            ggCGCGGGAAATTCACTTCCGCCCGGAGTTGTTCAAATGCAACGATGCAGGTGTTGATACAAAACAATTCGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATgtag                                                                                                                                             <  2:344257/143‑1 (MQ=255)   caagcaacgcataaacggtaaaggtagttgcccccggttttaccgtatcaaaccagaaggcggtaaagtcggggaactcttctttactgtcggtgtaagtgtcgatcgccaggccgcgggccgacaaaccgtattgatatGTa                                                                                                                                           >  1:196729‑M1/141‑143 (MQ=255)      gTGAAATTCACTTTCGCCCGGAGTTGTTCAAATACAACGATGCAGGTGTTGATACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCa                                                                                                                                        >  1:495634/1‑143 (MQ=255)       tGAAATTCACTTTCGCCCGGAGTTGTTCAAATACAACGATGCAGGTGTTGATACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGCCGCGCCGTGACGTAGTATCAt                                                                                                                                       >  2:360820/1‑143 (MQ=255)        gAAATTCACGTGCGCCCGGAGTTGTTTAATTCAAATGATGCAGGTGTTGATACAGAGCAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCTGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCAtt                                                                                                                                      <  2:528908/143‑1 (MQ=255)             tCACCTTCGCCCGGAGTTGTTCAAATACAACGATGCAGGTGTTGATACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTCCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCg                                                                                                                                 <  1:205004/143‑1 (MQ=255)                             ttgttCAAATACAACGATGCAGGTGTTGATACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCcg                                                                                                                 >  1:356118/1‑143 (MQ=255)                                  ccccggttttaccgtatcaaaccagaaggcggtaaagtcggggaactcttctttactgtcggtgtaagtgtcgatcgccaggccgcgggccgacaaaccgtattgatatGTATCATCAA‑CGGCGCGAGTTATTTCCGCGCCGt                                                                                                           >  2:487512‑M1/110‑143 (MQ=255)                                   cccggtcttaccgtatcaaaccagaaggcggtaaagtcggggaactcttctttactgtcggtgtaagtgtcgatcgccaggccgcgggccgacaaaccgtattgatatGTATCATCAA‑CGGCGCGAGTTATTTCCGCGCCGtt                                                                                                          >  1:43977‑M1/109‑143 (MQ=255)                                      gaCAACGATGCAGGTGTTGATACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTtga                                                                                                        <  2:388910/142‑1 (MQ=255)                                       aCAACGATGCAGGTGTTGATACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTtgat                                                                                                       <  2:458799/143‑1 (MQ=255)                                         aaCGATGCAGGTGTTGATACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTCGCGCGCCGTCATGTCGTATCATTTATCGCCGCGAGCTATTTCCGCGCCGtccacga                                                                                                     >  2:509164/1‑137 (MQ=255)                                          tcGATGCCGGTGTTGGTACATACCGATTGGGTGGGCAAGGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGGACCGGCGCGCCGTGATGTAGTATCGTTTCTCGGCGCGAGTTATTTCCGCGCCGTTgatgat                                                                                                    <  2:528307/142‑1 (MQ=255)                                           taccgtatcaagccagaaggcggtaaagtcggggaactcttctctaatggcatacgaggtgtcgatcgcctggccgcgggccgacaaaccgtattgatatGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATa                                                                                                   >  2:387494‑M1/101‑143 (MQ=255)                                            gccgtatcaaaccagaaggggctaaagtcggggaactcttctttactgtcggtgtaagtgtcgatcgccaggccgcgggccgacaaaccgtattgatatGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATAc                                                                                                  >  2:407026‑M1/100‑143 (MQ=255)                                                 aGGTGTTGATACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGGTGATGATACCTATc                                                                                             >  1:98482/1‑143 (MQ=255)                                                   gtgtTGATACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCaa                                                                                           >  1:102269/1‑143 (MQ=255)                                                         aTACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATCCATATCAATACGGt                                                                                     >  2:275274/1‑143 (MQ=255)                                                         aTACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTCAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTTCTGATACATATCAACACGGt                                                                                     >  2:346259/1‑143 (MQ=255)                                                          tACAACACAAGTAGAGGGGCAAGTCGTTCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCGCGGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGtt                                                                                    <  2:126587/143‑1 (MQ=255)                                                          tACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATCAGGtt                                                                                    >  1:224247/1‑143 (MQ=255)                                                            cAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGAGTGTTTAAAGCACCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTAATTCCGCACCGTTGATAAAACATATCCATACGGATTg                                                                                  >  2:396231/1‑143 (MQ=255)                                                                     tAGAAGGGGAAAGCGAGCTCGGCTTGGCGGGTTGGCGCGTGGTTAAAGCCGCCGAACTGGCGCGCCGTGATGTAGTGTCATTGCGCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCcgc                                                                         <  1:185113/143‑1 (MQ=255)                                                                         aGGGCAAGGCGATCTCGGCTGTGCCGGTTTTCGCGGGGTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTGCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGcc                                                                     <  1:391302/143‑1 (MQ=255)                                                                                    aTCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCAGTTCTCGGCGCGAGGTATTTCCGCGCCGTTGATGAGACATAGCAATACGGGTTGTCGGCCCGCGGCCTGGCGATCGac                                                          >  1:166440/1‑143 (MQ=255)                                                                                     tctcGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGaca                                                         <  1:536450/143‑1 (MQ=255)                                                                                         ggCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAAACCGGTTTGTCGGCCCGCGGCCTGGCGATCggacccta                                                     >  2:47571/1‑136 (MQ=255)                                                                                          gCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTGCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTac                                                    <  1:391760/143‑1 (MQ=255)                                                                                                 cgtttttCGCGTGTTTAAAGCCCCCGAGCTGGGGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACa                                             <  2:165228/140‑1 (MQ=255)                                                                                                     tttCGCGTGTTTAAAGCCCCAGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACAGTTACACCGACAGTat                                         >  2:479406/1‑142 (MQ=255)                                                                                                     ttgcgcgTGTTTAAGGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTaa                                         <  2:352222/140‑1 (MQ=255)                                                                                                         gcgTGTTTAACGCCCGCGAACTGGCGCGCGGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAaagaa                                     <  2:539619/143‑1 (MQ=255)                                                                                                          cgTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGACCCACACTTACACCGACAGCAaagaag                                    >  2:486459/1‑143 (MQ=255)                                                                                                            tgtTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGCCAGTAAAGAcgag                                  >  1:79277/1‑143 (MQ=255)                                                                                                                 caaGCCCCCGCACTGGCGCGCCCTGACGTCGTATCATTTCTCGGCGCGAGGTATTTCCGCGCCGTTGATGATACATATCAATACGGTGTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTccc                             <  2:375724/142‑1 (MQ=255)                                                                                                                 aaaGCCCCCGAACTGGCGCGCCTTGACGTAGTATCATTACTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACATTAAAGAAGAGTTccc                             <  2:461442/143‑1 (MQ=255)                                                                                                                   aGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGCCACTTCCACCGACAGTACAGAAGAGATCCCCg                           >  2:145801/1‑143 (MQ=255)                                                                                                                               ggCGCCCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCt               <  1:511765/143‑1 (MQ=255)                                                                                                                                          aTGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGGCTTCTGGTTTGAt    >  1:178623/1‑143 (MQ=255)                                                                                                                                           tGTAGTATCATTTCTCGGCGCGAGTTATTTCCGTCTCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATa   <  1:478263/143‑1 (MQ=255)                                                                                                                                           tGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATa   <  1:51675/143‑1 (MQ=255)                                                                                                                                            gtagtaTCATTTCTCGGCGCGAGTTATTTCAGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGACCGCCACCTACACCGACAGTAAAGAAGAGTCCCCCGAGATTGCCGCCTTGTGCGTTGATAc  >  2:478576/1‑143 (MQ=255)                                                                                                                                               |                                                                                                                                            GGCGCGTGAAATTCACTTTCGCCCGGAGTTGTTCAAATACAACGATGCAGGTGTTGATACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATAC  >  NC_000913/1497236‑1497517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.