New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1497378 =	32 (1.150)	4 (0.150)	3/250	NT	10.5%	coding (523/1656 nt)	opgD	glucan biosynthesis protein D
	?	NC_000913	1497422 =	38 (1.440)					coding (567/1656 nt)	opgD	glucan biosynthesis protein D

AGGTGTTGATACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTAAAACCGGGGGCAACTACCTTTACCGTTTATGCGTTGCTCG  >  NC_000913/1497284‑1497561                                                                                                                                           |                                                                                                                                            aGGTGTTGATACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGGTGATGATACCTATc                                                                                                                                         >  1:98482/1‑143 (MQ=255)   gtgtTGATACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCaa                                                                                                                                       >  1:102269/1‑143 (MQ=255)         aTACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATCCATATCAATACGGt                                                                                                                                 >  2:275274/1‑143 (MQ=255)         aTACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTCAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTTCTGATACATATCAACACGGt                                                                                                                                 >  2:346259/1‑143 (MQ=255)          tACAACACAAGTAGAGGGGCAAGTCGTTCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCGCGGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGtt                                                                                                                                <  2:126587/143‑1 (MQ=255)          tACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATCAGGtt                                                                                                                                >  1:224247/1‑143 (MQ=255)            cAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGAGTGTTTAAAGCACCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTAATTCCGCACCGTTGATAAAACATATCCATACGGATTg                                                                                                                              >  2:396231/1‑143 (MQ=255)                     tAGAAGGGGAAAGCGAGCTCGGCTTGGCGGGTTGGCGCGTGGTTAAAGCCGCCGAACTGGCGCGCCGTGATGTAGTGTCATTGCGCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCcgc                                                                                                                     <  1:185113/143‑1 (MQ=255)                         aGGGCAAGGCGATCTCGGCTGTGCCGGTTTTCGCGGGGTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTGCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGcc                                                                                                                 <  1:391302/143‑1 (MQ=255)                                    aTCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCAGTTCTCGGCGCGAGGTATTTCCGCGCCGTTGATGAGACATAGCAATACGGGTTGTCGGCCCGCGGCCTGGCGATCGac                                                                                                      >  1:166440/1‑143 (MQ=255)                                     tctcGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGaca                                                                                                     <  1:536450/143‑1 (MQ=255)                                         ggCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAAACCGGTTTGTCGGCCCGCGGCCTGGCGATCggacccta                                                                                                 >  2:47571/1‑136 (MQ=255)                                          gCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTGCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTac                                                                                                <  1:391760/143‑1 (MQ=255)                                                 cgtttttCGCGTGTTTAAAGCCCCCGAGCTGGGGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACa                                                                                         <  2:165228/140‑1 (MQ=255)                                                     tttCGCGTGTTTAAAGCCCCAGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACAGTTACACCGACAGTat                                                                                     >  2:479406/1‑142 (MQ=255)                                                     ttgcgcgTGTTTAAGGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTaa                                                                                     <  2:352222/140‑1 (MQ=255)                                                         gcgTGTTTAACGCCCGCGAACTGGCGCGCGGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAaagaa                                                                                 <  2:539619/143‑1 (MQ=255)                                                          cgTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGACCCACACTTACACCGACAGCAaagaag                                                                                >  2:486459/1‑143 (MQ=255)                                                            tgtTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGCCAGTAAAGAcgag                                                                              >  1:79277/1‑143 (MQ=255)                                                                 caaGCCCCCGCACTGGCGCGCCCTGACGTCGTATCATTTCTCGGCGCGAGGTATTTCCGCGCCGTTGATGATACATATCAATACGGTGTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTccc                                                                         <  2:375724/142‑1 (MQ=255)                                                                 aaaGCCCCCGAACTGGCGCGCCTTGACGTAGTATCATTACTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACATTAAAGAAGAGTTccc                                                                         <  2:461442/143‑1 (MQ=255)                                                                   aGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGCCACTTCCACCGACAGTACAGAAGAGATCCCCg                                                                       >  2:145801/1‑143 (MQ=255)                                                                               ggCGCCCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCt                                                           <  1:511765/143‑1 (MQ=255)                                                                                          aTGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGGCTTCTGGTTTGAt                                                >  1:178623/1‑143 (MQ=255)                                                                                           tGTAGTATCATTTCTCGGCGCGAGTTATTTCCGTCTCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATa                                               <  1:478263/143‑1 (MQ=255)                                                                                           tGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATa                                               <  1:51675/143‑1 (MQ=255)                                                                                            gtagtaTCATTTCTCGGCGCGAGTTATTTCAGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGACCGCCACCTACACCGACAGTAAAGAAGAGTCCCCCGAGATTGCCGCCTTGTGCGTTGATAc                                              >  2:478576/1‑143 (MQ=255)                                                                                               gtatcatcaacggcgcggaaataactcgcgccgagaaatgatacATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTAGCCCCTTCTGGTTTGATAcggc                                           >  2:407026‑M2/45‑142 (MQ=255)                                                                                                tatcatcaacggcgcggaaataactcgcgccgagaaatgatacATATCAATACGGTTTGTCGGCCCGCGGCCAGGCGATCGACACCTCGTATGCCATTAGAGAAGAGTTCCCCGACTTTACCGCCTTCTGGCTTGATACGGTa                                          >  2:387494‑M2/44‑143 (MQ=255)                                                                                                TATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTa                                          >  1:292640‑M1/1‑143 (MQ=255)                                                                                                TATCATTTCTCGGCGCGAGTTAGTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTa                                          >  2:98482‑M1/1‑143 (MQ=255)                                                                                                 ATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACCCCGACAGTAAAGAAGAGTTCCCCCACTTTACCGCCTTCTGGTTTGATACggtca                                         <  2:503047‑M1/143‑3 (MQ=255)                                                                                                       tctcGGCGCGAGTTATTTCCGCGCCGTTGCTGATACATCTCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTAAAACCgg                                   <  2:235857/143‑1 (MQ=255)                                                                                                        tccagcgcGAGTTATTCCCGCGCCGTTGATGTTACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTAAAACCggg                                  <  2:19751/139‑1 (MQ=255)                                                                                                        aacggcgcggaaataactcgcgccgttgatgatacATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTAAGACCggg                                  >  1:43977‑M2/36‑143 (MQ=255)                                                                                                         tcGGCGCGAGTTATTTCCGCGCCGTTGATGGTACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTAAAACCgggg                                 <  2:413649/143‑1 (MQ=255)                                                                                                         tcGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTAAAACCgggg                                 >  2:340690/1‑143 (MQ=255)                                                                                                         acggcgcggaaataactcgcgccgttgatgatacATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTAAAACCgggg                                 >  2:487512‑M2/35‑143 (MQ=255)                                                                                                           ggCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGCCACTTATACTTACAGTAAAGAAGAGTTCCCCGACATTATCGCATCCTGCTTCTAGACGGTAAAACCCGGGGc                               >  2:163862/1‑143 (MQ=255)                                                                                                           ggCGCGAGTTATGTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTAAAACCGGGGGc                               <  1:385446/143‑1 (MQ=255)                                                                                                              gctaGTCATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCTACTTTACCGCCTTCTGGTTTGATACGGTAAAACCGGGGGCAAc                            <  1:117671/140‑1 (MQ=255)                                                                                                                        tCCGCGCCGTTGATGATACATTTCAATTCTGTTTGGCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGAGACGGTAAAACCGGGGGCAACTACCTTTAcc                  <  1:346542/143‑1 (MQ=255)                                                                                                                          cgcgCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACCCTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATAAGGAAAAACCAGGGGCAACTACCTTTACCGt                >  1:98877/1‑143 (MQ=255)                                                                                                                           gcgcCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTAAAACCGGGGGCAACTACCTTTACCGtt               <  2:519599/143‑1 (MQ=255)                                                                                                                            cgcCGTTGATGATACATTTCAATACGGTTTGTCGGCCTGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTGCCCCGACTTTACCGCCTTCTGGTTTGATACGGTAAAACCGGGGGCAACTACCTTTACCGttt              <  2:441825/143‑1 (MQ=255)                                                                                                                              ccGTTGACGATCAATCTCGATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTAAAACCGGGGGCAACTACCTTTACCGTTTAt            <  1:273183/143‑1 (MQ=255)                                                                                                                                 ttGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGCCAGTAAGGAAGAGATCCCCGACTTTACCGCCATCTGGTCTGATACGGTAAAACCGGGGGCAACGACCTACACCGCTCATGCg         >  2:274886/1‑143 (MQ=255)                                                                                                                                   gatgatACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTAAAACCGGGGGCAACTACCTTTACCGTTTATGCGtt       <  1:509164/143‑1 (MQ=255)                                                                                                                                        tacATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTAAAACCGGGGGCAACTACCTTTACCGTTTATGCGTTgcttg  >  1:196729‑M2/4‑141 (MQ=255)                                                                                                                                           |                                                                                                                                            AGGTGTTGATACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTAAAACCGGGGGCAACTACCTTTACCGTTTATGCGTTGCTCG  >  NC_000913/1497284‑1497561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.