| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4094688 = | NA (NA) | 3 (0.100) | 3/250 | NT | NA | noncoding (31/34 nt) | other | REP299i |
| ? | NC_000913 | 4094718 = | NA (NA) | noncoding (1/34 nt) | other | REP299i | |||||
CCGTGGCAGGCGGTCTGGGAAATGTATTGCCAACGTCACGATACGCCAGCAGGTAGCGAATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGAAATTTTGAGTCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4094836‑4094688‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACGATTTCTGCTCTTCCAG > NC_000913/4094718‑4094857 CCGTGGCAGGCGGTCTGGGAAATGTATTGCCAACGTCACGATACGCCAGCAGGTAGCCAATGGCTGGCGATCGTGCGGGCTGAGGAGAAAGAAATTGTGAGTCGCCGAGGGTAAGCACTGCCGGATGCGGCGCGAGCGCATTA > 2:58920/1‑143 CGTGGCAGGCGGTCTGGGAAATGTATTGCCAACGTCACGATA‑TCCAGCAGGTAGCGAATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGAAATTTTGAGTCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAGCGCCGTATC > 2:385183/1‑143 gcgtGCGGTCTGGGTAATGGATTGCCAACGTCACGATACGCCAGCAGGTAGCGAATGGTTGGAGCGGGTGCGGGCTTATGAGAAAGAAATTTTGCGTCGCCGCGGCTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGG < 2:32820/139‑1 GCAGGCGGTCTGGGAAATGTATTGCCAACGTCACGATACGCCAGCAGGTAGCGAATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGAAATTTTGAGTCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGG > 1:638587/1‑143 cgGGCGGGCTGGGAAATGTAGGGCCAACGTCACGATACGCCAGCAGGTAGCGCATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGAAATTTTCAGTCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGC < 2:206459/141‑1 cgGGCGGGCGGGTAAGTGTAGGGCCACCGGCACGATACGCCAGCAGGTAGCGAATGGCGGGAGAGCGTGCGGGCTTATGAGAAAGAAATTTTGAGTCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGC < 2:512802/141‑1 TGCCGGATGCGGCGCGAGCGCCTTATCCGGCAGTGTTTACCCGCGGCGACTCAAAAGTTCTTTCTCATCAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGCCGTTGGCAATACATTTCCCGGCCCGCCT > 2:78492/1‑143 CCGGATGCGGCGCGAGCGCCTTATCCGGCAGTGTTTACCCGCGGCGA > 1:329430/1‑47 CCGGATGCGGCGCGAGCGCCTTATCCGGCAGTGTTTACCCGCGGCGA < 2:329430/47‑1 gctgCCGGGAGTGTTTCCCCGCGGCGACTCAAAATTGCTTTCGAATACGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACGATTTCTGCTC < 2:566939/139‑1 ATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTCTCGTGACGCTGGCAACACCTTTCCACGCCCGCCGGCCACGGCAACGATGTCTcagcct > 2:146521/1‑137 ATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACGATTTCTGCTCTT < 1:294399/143‑1 GGCAGTGTTTACCCGCGGCGACTCAACATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGCCCGCCTGCCCCGGCCACGATTTCTCCTCTTCCcg > 1:167959/1‑141 CCGTGGCAGGCGGTCTGGGAAATGTATTGCCAACGTCACGATACGCCAGCAGGTAGCGAATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGAAATTTTGAGTCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4094836‑4094688‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACGATTTCTGCTCTTCCAG > NC_000913/4094718‑4094857 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |