New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 4094688 = | NA (NA) | 3 (0.100) | 3/250 | NT | NA | noncoding (31/34 nt) | other | REP299i |
? | NC_000913 | 4094718 = | NA (NA) | noncoding (1/34 nt) | other | REP299i |
CCGTGGCAGGCGGTCTGGGAAATGTATTGCCAACGTCACGATACGCCAGCAGGTAGCGAATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGAAATTTTGAGTCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4094836‑4094688 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACGATTTCTGCTCTTCCAG > NC_000913/4094718‑4094857 CCGTGGCAGGCGGTCTGGGAAATGTATTGCCAACGTCACGATACGCCAGCAGGTAGCCAATGGCTGGCGATCGTGCGGGCTGAGGAGAAAGAAATTGTGAGTCGCCGAGGGTAAGCACTGCCGGATGCGGCGCGAGCGCATTA > 2:58920/1‑143 CGTGGCAGGCGGTCTGGGAAATGTATTGCCAACGTCACGATA‑TCCAGCAGGTAGCGAATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGAAATTTTGAGTCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAGCGCCGTATC > 2:385183/1‑143 gcgtGCGGTCTGGGTAATGGATTGCCAACGTCACGATACGCCAGCAGGTAGCGAATGGTTGGAGCGGGTGCGGGCTTATGAGAAAGAAATTTTGCGTCGCCGCGGCTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGG < 2:32820/139‑1 GCAGGCGGTCTGGGAAATGTATTGCCAACGTCACGATACGCCAGCAGGTAGCGAATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGAAATTTTGAGTCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGG > 1:638587/1‑143 cgGGCGGGCTGGGAAATGTAGGGCCAACGTCACGATACGCCAGCAGGTAGCGCATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGAAATTTTCAGTCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGC < 2:206459/141‑1 cgGGCGGGCGGGTAAGTGTAGGGCCACCGGCACGATACGCCAGCAGGTAGCGAATGGCGGGAGAGCGTGCGGGCTTATGAGAAAGAAATTTTGAGTCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGC < 2:512802/141‑1 TGCCGGATGCGGCGCGAGCGCCTTATCCGGCAGTGTTTACCCGCGGCGACTCAAAAGTTCTTTCTCATCAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGCCGTTGGCAATACATTTCCCGGCCCGCCT > 2:78492/1‑143 CCGGATGCGGCGCGAGCGCCTTATCCGGCAGTGTTTACCCGCGGCGA > 1:329430/1‑47 CCGGATGCGGCGCGAGCGCCTTATCCGGCAGTGTTTACCCGCGGCGA < 2:329430/47‑1 gctgCCGGGAGTGTTTCCCCGCGGCGACTCAAAATTGCTTTCGAATACGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACGATTTCTGCTC < 2:566939/139‑1 ATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTCTCGTGACGCTGGCAACACCTTTCCACGCCCGCCGGCCACGGCAACGATGTCTcagcct > 2:146521/1‑137 ATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACGATTTCTGCTCTT < 1:294399/143‑1 GGCAGTGTTTACCCGCGGCGACTCAACATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGCCCGCCTGCCCCGGCCACGATTTCTCCTCTTCCcg > 1:167959/1‑141 CCGTGGCAGGCGGTCTGGGAAATGTATTGCCAACGTCACGATACGCCAGCAGGTAGCGAATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGAAATTTTGAGTCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4094836‑4094688 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACGATTTCTGCTCTTCCAG > NC_000913/4094718‑4094857 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |