New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4094688 =NA (NA)3 (0.100) 3/250 NT NA noncoding (31/34 nt) other REP299i
?NC_000913 4094718 = NA (NA)noncoding (1/34 nt) other REP299i

ATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTG  >  NC_000913/4094546‑4094830
                                                                                                                                              |                                                                                                                                                
aTGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGCCGCGGTCGCGTCTTGTCAGGCCTACAACTGTTGCCGACCCGTCgg                                                                                                                                                  >  1:1828/1‑143 (MQ=255)
 tGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGc                                                                                                                                                 <  2:140275/143‑1 (MQ=35)
  cgggaagaggagaaatcgtggccggggcaggcgggctgggaaatgtattgccaacgtcacgatacgccagcaggtagcgaatggctggagagcgtgcgggcttatgagaaagaaatgttgagtcgccgcgggtaaacactGcc                                                                                                                                                >  1:167959‑M1/141‑143 (MQ=255)
    gACGCTGTCGAGTCTTATCAAGCCTACAACTATTGCCGACCTGTAGGCCGGAAAAGGCACTTGTGCCGCATACGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTAGCCGACCCGTAGGcccg                                                                                                                                              >  2:273530/1‑141 (MQ=11)
     aCGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGa                                                                                                                                             <  1:36018/143‑1 (MQ=35)
      aggctgagacatcgttgccgtggccggcgggcgtggaaaggtgttgccagcgtcacgagacgccagcaggtagcgaatggctggagagcgtgcgggcttatgagaaagaaattttgagtcgccgcgggtaaacactGCCGGAt                                                                                                                                            >  2:146521‑M1/137‑143 (MQ=255)
      aagagcagaaatcgttgccgtggcaggcggtctgggaaatgtattgccaacgtcacgatacgccagcaggtagcgaatggctggagagcgtgcgggcttatgagaaagaaattttgagtcgccgcgggtaaacactGCCGGAt                                                                                                                                            <  1:294399‑M1/7‑1 (MQ=255)
        gagcagaaatcgttgccgtggcaggcggtctgggaaatgtattgccaacgtcacgatacgccagcaggtagcgaatggctggagagcgtgcgggcgtattcgaaagcaattttgagtcgccgcggggaaacactcccggcagc                                                                                                                                          <  2:566939‑M1/9‑5 (MQ=255)
            tcggTCTTATGAGGCCTACTTTTATGGCCGACCTGTGGGCCGGGTAAGGCACTTGTGCCGCATCCGGCACTCCATGCCTGATGCCACGCTGTCTCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGgcg                                                                                                                                      <  2:261115/140‑1 (MQ=11)
                tcgtATCAGGCCTACAACGGGTGCCCGCCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTcg                                                                                                                                  <  2:56251/140‑1 (MQ=11)
                  ttATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTcgcg                                                                                                                                <  2:483083/143‑1 (MQ=40)
                   tATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCgcgc                                                                                                                               <  2:361768/143‑1 (MQ=255)
                    ctCAGGCCTACACCTTTTGCCTACCTGTACGCCGTTTAAGGCGCTTGTTCCGGCTCCCGCAGTCACCGACTGCTGCCGTCCCGCCCTGTCCTTACAGGACGCTCTCCGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGcgcc                                                                                                                              <  2:233199/142‑1 (MQ=255)
                      cgggtcTACAACCTTTGCCGACCTGGTTGGCGGATAAGGCACTTGTGCCGCCTCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGCCCCGTTGGCCGGATAAGGCGCTCGcgccgc                                                                                                                            <  2:330611/138‑1 (MQ=14)
                      cAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGcgccgc                                                                                                                            <  1:444318/143‑1 (MQ=255)
                       aGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACGACTGTTGCCGCCCCGTAGGCCCGATAGGGCGCTcggaccaca                                                                                                                           >  2:185275/1‑136 (MQ=14)
                            tgcAACTATCGCCGACCTGGAGGCCGGACAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTGGCCGACCCGTAGGCCGGATGCGGCGCGAGCGCCTTATCCgg                                                                                                                      <  1:44375/141‑1 (MQ=11)
                              cAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCa                                                                                                                    >  1:327586/1‑143 (MQ=255)
                              cAACGACTGCCGACCTGTAGGCCGGATAAGGCACCTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCa                                                                                                                    <  2:134329/143‑1 (MQ=255)
                              aggcgggccgggaaatgtattgccaacggcacgatacgccagcaggtagcgaatggctggagagcgtgcgggctgatgagaaagaacttttgagtcgccgcgggtaaacactGCCGGATAAGGCGCTCGCGCCGCATCCGGCa                                                                                                                    >  2:78492‑M1/113‑143 (MQ=255)
                                aCTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAgg                                                                                                                  >  2:479798/1‑142 (MQ=255)
                                  tATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAgtgt                                                                                                               >  1:401530/1‑143 (MQ=255)
                                            cTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCCGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATCACGCGACCGCGACGCACCCGGCAGCGCTTTCCCcgcc                                                                                                      >  2:124946/1‑142 (MQ=14)
                                             tGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTCGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGGGTCTACCCgcggc                                                                                                    >  2:447385/1‑143 (MQ=255)
                                             ggTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGCCGCTGTCGCGTCTTATCAGGCCTACACCTGTTGCCTACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCgcggc                                                                                                    <  1:373272/142‑1 (MQ=255)
                                                 ggCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCCGCGGCt                                                                                                >  1:165322/1‑143 (MQ=255)
                                                         gaGGCACTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACCCAAAAttt                                                                                        <  2:574614/142‑1 (MQ=255)
                                                         aaGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGCCTCAAAAttt                                                                                        >  1:464302/1‑143 (MQ=255)
                                                             cACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttcttt                                                                                    <  1:137075/143‑1 (MQ=255)
                                                             cACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttcttt                                                                                    <  2:37339/143‑1 (MQ=255)
                                                                    gCCGCATCCGGCAATCAATGCCTGCTGCGCGGCTGTCGCGTCTTCTCGGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATaa                                                                             <  2:315684/143‑1 (MQ=21)
                                                                    gCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAg                                                                                                                                         <  2:58159/84‑1 (MQ=35)
                                                                      cGCATCCGGCAATCGATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGc                                                                           <  2:192018/143‑1 (MQ=255)
                                                                       gCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGCTAAGGCGCTCGCGCCGCATCCGGCAGTGATTACGCGCGGCGGCTAAAACATCCTGTCTCACAAGcc                                                                          >  2:311498/1‑143 (MQ=17)
                                                                        ctcccGGCAATCAATGCCTGCTGCGACGCTGTCGCGTCGTATCAGGCCTACAGCTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGccc                                                                         <  2:515911/140‑1 (MQ=255)
                                                                        cATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACCCAAAATTTCTTTCTCATAAGccc                                                                         >  2:439460/1‑143 (MQ=255)
                                                                           ccGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCCAAATTTCTTTCTCATAAGCCCGCa                                                                      >  1:231509/1‑143 (MQ=255)
                                                                            cGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGa                                                                                                                                             <  1:242808/72‑1 (MQ=35)
                                                                            cGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGa                                                                                                                                             >  2:242808/1‑72 (MQ=35)
                                                                            cGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCAc                                                                     <  2:515177/143‑1 (MQ=255)
                                                                             ggCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATGAGGCCTACAACAGTTGCCGACCCGCAGGCCGGATAAGGAGCTCGCGCCGCACCCGGCCGCGTTTACCCGCGGCGACGCAAAATTGCTTTCGCATAAGCCCGCACg                                                                    >  2:294399/1‑143 (MQ=21)
                                                                             ggCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACg                                                                    >  1:322762/1‑143 (MQ=255)
                                                                                     atGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAg                                                            <  2:401530/143‑1 (MQ=255)
                                                                                       gCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCCGCCGTGCTTACCCGCGGCCCCTCAACATTTCTTTCTCCTCAGCCCGCACGCTCTCCAccc                                                         >  1:188790/1‑143 (MQ=21)
                                                                                                gACGCTGTCGCGTCTTATCAGGCCTACAACTGTCGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTAc                                                <  2:353331/143‑1 (MQ=255)
                                                                                                     tGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCTCACCCTCTCCAGCCATTCGCTACctgct                                           >  1:21764/1‑143 (MQ=255)
                                                                                                       tCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTgg                                         <  1:41537/143‑1 (MQ=255)
                                                                                                            tCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTAt                                    <  1:643675/143‑1 (MQ=255)
                                                                                                                        tACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGAGTTGACCAGCGGCGACGCAAAATTTCTTTCTGATAAGCCCGCACGCTCCCCAGCCAGTCGCTACCGGCTGGCGTAGCGTGACGTTgga                        >  1:422669/1‑142 (MQ=37)
                                                                                                                          ggagtgttgtCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAGGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCaa                      <  1:86093/139‑1 (MQ=255)
                                                                                                                            tcgccgcgggtaaacactGCCGGATAAGGCGCTCGCGCCGCATCCgg                                                                                                                      <  2:329430‑M1/29‑1 (MQ=255)
                                                                                                                            tcgccgcgggtaaacactGCCGGATAAGGCGCTCGCGCCGCATCCgg                                                                                                                      >  1:329430‑M1/19‑47 (MQ=255)
                                                                                                                            aCTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATa                    <  1:281311/143‑1 (MQ=255)
                                                                                                                              tGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCAGCCGGCAGTGATTACCCGCGACGAGTCAAAATTTCTTTGTCATAAGCCCGCACGCTCTCCAGCCATTCGCTAGCTGATGGCTTATCGCGCAGTTGGCACTaaa                  >  1:487024/1‑141 (MQ=37)
                                                                                                                                  gCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTCCCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTc              <  1:368396/143‑1 (MQ=255)
                                                                                                                                  gCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTc              <  1:510326/143‑1 (MQ=255)
                                                                                                                                   ccGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTACCGTGACGTTGGCAATACATTTcc             >  2:124893/1‑143 (MQ=255)
                                                                                                                                   ccGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCAGGCACGATTCCGGTCCGTTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATGTcc             >  1:651534/1‑143 (MQ=37)
                                                                                                                                     gACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATGCATTTCCCa           >  1:464406/1‑143 (MQ=255)
                                                                                                                                     gACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCa           >  1:71335/1‑143 (MQ=255)
                                                                                                                                        ccGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTGTCAGAAGCCCGCACGCCCTCCAGGCGTTCACCCTCATCGAGCGTGTGGGGTCGTGGGGAATACATTTCCCAGAc        >  1:147447/1‑143 (MQ=19)
                                                                                                                                         cGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGAcc       <  2:579135/143‑1 (MQ=255)
                                                                                                                                           tAGGCTGGATAGGGCGCTGGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCGCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGc     <  2:309569/143‑1 (MQ=255)
                                                                                                                                             tgCCGGATGCGGCGCGAGCGCCTTATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCAAGCACCCCAAAGTGCGATTTTCTACCTGCTGGCGTATCGTGACGTGGGCAATAGAATTCGAAGACCGCCt   >  1:303701/2‑143 (MQ=255)
                                                                                                                                             ggCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGTTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCt   <  2:322762/143‑1 (MQ=255)
                                                                                                                                              GCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTGAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATGCGCTACCTGCTGGCGTATCGTGACGTTGGCCCTACATTTCCCAGCCcgcccg  <  2:206459‑M1/143‑3 (MQ=255)
                                                                                                                                              GCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCCGCCATTCGCTACCTGCTGGCGTATCGTGCCGGTGGCCCTACACTTAcccgcccgcccg  <  2:512802‑M1/143‑3 (MQ=255)
                                                                                                                                              |                                                                                                                                                
ATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTG  >  NC_000913/4094546‑4094830

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.