| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1436096 = | 30 (0.900) | 41 (1.240) | 39/262 | NT | 57.0% | coding (798/1134 nt) | ompN | outer membrane porin N |
| ? | NC_000913 | = 1441187 | 32 (0.970) | coding (130/267 nt) | ydbJ | DUF333 domain‑containing protein YdbJ | |||||
CCGCACCAATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1436228‑1436096‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACCCTACCCAAAACGCTGCTCGCATCTTTTCTTC < NC_000913/1441187‑1441049 CCGCACCAATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACT > 1:404807/1‑143 ACCAATGACCAGGTTAACCATATTGCGGCGGGTGGTGATAAGGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTG < 1:611565/143‑1 CCAATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGAGTAATATGACCCCGCTTCGCCCCTACTGG > 1:367679/1‑143 CAATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTGTTCAGAAACGCGTACTATGACCCCGCTTCCCCACTACTGGA > 2:623522/1‑143 CAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAACCGCGTAATATGACCCCGCTTCTCCACTACCGGACATCGcc > 2:583503/1‑141 AGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATCCGATGCGAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACG > 1:93949/1‑143 GTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATCTGACCCCGCTTCTCCACTACTGGACATCGAAGCT > 1:486428/1‑143 GTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCT > 1:525355/1‑143 gTAAGCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTT < 1:324223/142‑1 CATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAA > 1:615199/1‑143 ATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAAC < 1:472144/143‑1 TACTGCGGCGGGTGGTGATTAAGCAGATGCGTGGACTGCTCGGCTAAAATACGATGCTAACAATATTTATCTGGCTACCGTGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCTCTACTGGACATCGACGCTTTTAAACC < 2:328776/143‑1 CGGCGGGTGGTGATAAAGCAGACGCGTGGACCGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCG < 1:187370/143‑1 GCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACCGCGACGCTTTTAAACCTGGAGCT > 2:619368/1‑143 CGGGTGGTGATAAAGCATACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTA < 2:193536/143‑1 ATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATGCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGG < 2:346555/143‑1 AAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTCCGTCCGCGGCA > 2:110733/1‑143 AAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCA < 1:606734/143‑1 AGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGT > 1:348785/1‑143 GCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTGTTAAACCTGGCGCTACGTGCGCGCCAGTCGCCTGC > 1:143078/1‑143 CGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCT < 2:404807/143‑1 GTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCAGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCAAGGCAGTAGACTGggt > 2:587186/1‑140 GGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAA > 1:261034/1‑143 GACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAAC < 1:497883/143‑1 TGCTGGGCGAAAATACGATGCTAACAATAGTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGG < 2:634990/143‑1 GGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCAC > 2:451206/1‑143 GCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCGCT > 1:26807/1‑143 AAATACGATGCTACCAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAAACTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACGACTA > 1:197718/1‑143 ACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACG < 1:192008/143‑1 GATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCC < 2:615199/143‑1 TAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCCGTCGCCTGCTGAACAGCTCCCCTACTACACGCCGccca > 2:631512/1‑139 ACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTATCCACTACCGGACATCGCCGATTCTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCAGACAgtc > 1:305057/1‑140 cACCTGGCAACCATGTATGCAGAAACGCGTAATATGCCCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCt < 1:375021/142‑2 TACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTACACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACACGGTCACTACTACACGCCGGCAACCATAAAGCG > 2:303982/1‑143 ACCTGGCGACCATGGATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCGACGTGCGCGGCAGCCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGG < 2:607331/143‑1 TGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATCAAGCGGCAC > 1:622863/1‑143 ATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAGGCGGCACACCCTACC > 2:206692/1‑143 TATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACCCTACCCAA > 1:568832/1‑143 AAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGGACAGGTTCACGACTCCACGCCGACACCAATGAAGCGGCACACCCTACCCGCAACGCcg > 2:587956/1‑141 agATGACCGCGCTTCTCCACGACTGGACATCGACGCTGTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACCCTACCCAAAACGCTGCTCGCATCT < 2:257971/141‑1 TATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACCCTACCCAAAACGCTGCTCGCATCTT < 1:316387/143‑1 CCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGGCAAAAAGAATAAAGCGGCACACCCTACCCAAAACGCTGCTCGCATCTTTTCTTC > 1:477925/1‑143 CCGCACCAATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1436228‑1436096‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACCCTACCCAAAACGCTGCTCGCATCTTTTCTTC < NC_000913/1441187‑1441049 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |