New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1436096 =30 (0.900)41 (1.240) 39/262 NT 57.0% coding (798/1134 nt) ompN outer membrane porin N
?NC_000913 = 1441187 32 (0.970)coding (130/267 nt) ydbJ DUF333 domain‑containing protein YdbJ

CACCACCCGCAGCGTGCAGGTCACGGCCTTTAGACATCAGGAAAGAGACTGCCGGACGCAGACCAAAATCAAACTGGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAG  >  NC_000913/1435957‑1436237
                                                                                                                                           |                                                                                                                                             
gaagaaaagatgcgagcagcgttttgggtagggtgtgccgctttattctttttgccgtgtagtagtgaacctgttcagcaggcgactgccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCggg                                                                                                                                            >  1:477925‑M1/140‑143 (MQ=255)
  ccaccCGCAGCGTGCAGGTCACGGCCTTTAGACATCAGGAAAGAGACTGCCGGACGCAGACCAAAATCAAACTGGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGt                                                                                                                                          <  2:218459/143‑1 (MQ=255)
  ccaccCGCAGCGTGCAGGTCACGGCCTTTAGACATCAGGAAAGAGACTGCCGGACGCAGACCAAAATCAAACTGGTACTGTGCAGTGACTTCAAAATTCTGGATTTTGTTTGCCACAGCCTAATCGCTGTCGCCAAAAGGGGt                                                                                                                                          >  2:481681/1‑143 (MQ=255)
   caccCGCAGCGTGCAGGTCACGGCCTTTAGACATCAGGAAAGAGACTGCCGGACGCAGACCAAAATCAAACTGGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAACAGGGGTc                                                                                                                                         >  2:7326/1‑143 (MQ=255)
      ccGCAGCGTGCAGGTCACGGCCTTTAGACATCAGGAAAGAGACTGCCGGACGCAGACCAAAATCAAACTGGTGCTGTGCAGTGACTTCAAAATTATGGGTTTTGTTTGCAACAGCACAATCGCTGGCGCCCAACGGGGTCatc                                                                                                                                      >  1:181398/1‑142 (MQ=255)
      aagatgcgagcagcgttttgggtagggtgtgccgctttattgttgtcggcgtgtagtagtgaacctgttcagcaggcgactgccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCata                                                                                                                                      <  1:316387‑M1/10‑1 (MQ=255)
       cGCAGCGTGCAGGTCACGGCCTTTAGACATCAGGAAAGAGACTGCCGGACGCAGACCAAAATCAAACTAGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAACCGGGGTCatct                                                                                                                                     >  2:318464/1‑141 (MQ=255)
       agatgcgagcagcgttttgggtagggtgtgccgctttattgttgtcggcgtgtagtagtgaacctgttcagcaggcgactgccgcgcacgtagcgccaggtttaacagcgtcgatgtccagtcgtggagaagCGCGGtcatct                                                                                                                                     <  2:257971‑M1/11‑3 (MQ=255)
           gCGTGCAGGTCACGGCCTTTAGACATCAGGAAAGAGACTGCCGGACGCAGACCAAAATCAAACTGGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTAcg                                                                                                                                 <  2:549765/143‑1 (MQ=255)
                cggcgttgcgggtagggtgtgccgcttcattggtgtcggcgtggagtcgtgaacctgtccagcaggcgactgccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGttt                                                                                                                            >  2:587956‑M1/124‑143 (MQ=255)
                cAGGTCACGGCCTTTAGACATCAGGAAAGAGACTGCCGGACGCAGACCAAAATCAAACTGGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACACGATACTCGCTGTCGCCAACCGGGGTCATCTTACGCGttt                                                                                                                            >  2:215036/1‑143 (MQ=255)
                    tCACGGCCTTTAGACATCAGGAAAGAGACTGCCGGACGCAGACCAAAATCAAACTGGTACTGTGCAGTGACTTCAAAATGCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGa                                                                                                                        <  2:616503/143‑1 (MQ=255)
                     cACGGCCTTTAGACATCAGGAAAGAGACTGCCGGACGCAGACCAAAATCAAACTGGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGaa                                                                                                                       <  2:628159/143‑1 (MQ=255)
                       ttgggtagggtgtgccgctttattgttgtcggcgtgtagtagtgaacctgttcagcaggcgactgccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATa                                                                                                                     >  1:568832‑M1/117‑143 (MQ=255)
                          ggtagggtgtgccgccttattgttgtcggcgtgtagtagtgaacctgttcagcaggcgactgccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACAt                                                                                                                  >  2:206692‑M1/114‑143 (MQ=255)
                           cTTTAGACATCAGGAAAGAGACTGCCGGACGCAGACCAAAATCAAACTGGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATg                                                                                                                 <  2:152511/143‑1 (MQ=255)
                           cTTTAGACATCAGGAAAGAGACTGCCGGACGCAGACCAAAATCAAACTGGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGGCATATTACGCCTTTCTGAATACATg                                                                                                                 >  2:297924/1‑143 (MQ=255)
                                gACATCAGGAAAGAGACTGCCTGACGCAGACCAAAATCAAACTGGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGc                                                                                                            <  1:290036/143‑1 (MQ=255)
                                  gtgccgcttgattgttgtcggcgtgtagtagtgaacctgttcagcaggcgactgccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCa                                                                                                          >  1:622863‑M1/106‑143 (MQ=255)
                                    tCAGGAAAGAGACTGCCGGACGCAGACCAAAATCAAACTGGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAgg                                                                                                        >  1:270181/1‑143 (MQ=255)
                                     ccgctttattgttgtcggcgtgtagtagtgaacctgttcagcaggcggctgccgcgcacgtcgcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATCCATGGTCGCCAGGt                                                                                                       <  2:607331‑M1/41‑1 (MQ=255)
                                     cAGGAAAGAGACTGCCGGACGCAGACCAAAATCAAACTGGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACCTGGTTGCCAGGt                                                                                                       >  1:580816/1‑143 (MQ=255)
                                      cgctttatggttgccggcgtgtagtagtgaccgtgttcagcaggcgactgccgcgcacgtagcgccaggtgtaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTa                                                                                                      >  2:303982‑M1/102‑143 (MQ=255)
                                      agctttattgttgtcggcgtgtagtagtgaacctgttcagcaggcgactgccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGGCATATTACGCGTTTCTGCATACATGGTTGCCAGgtg                                                                                                      <  1:375021‑M1/42‑2 (MQ=255)
                                        gAAAGAGACTGCCGGACGCAGACCAAAATCAACCTGGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTaaa                                                                                                    <  2:559861/143‑1 (MQ=255)
                                              gactgtctgcgtgtagtagtgaacctgttcagcaggcgactgccgcgcacgtagcgccaggtttagaatcggcgatgtccggtagtggataagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGt                                                                                              >  1:305057‑M1/94‑143 (MQ=255)
                                                tgggcggcgtgtagtaggggagctgttcagcaggcgacggccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTa                                                                                            >  2:631512‑M1/92‑143 (MQ=255)
                                                cTGCCGGACGCAGACCAAAATCAAACTGGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTa                                                                                            <  2:442953/143‑1 (MQ=255)
                                                     ggcgtgtagtagtgaacctgttcagcaggcgactgccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATc                                                                                       <  2:615199‑M1/57‑1 (MQ=255)
                                                       cgtgtagtagtgaacctgttcagcaggcgactgccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGt                                                                                     <  1:192008‑M1/59‑1 (MQ=255)
                                                           tagtcgtgaacctgttcagcaggcgactgccgcgcacgtagcgccagttttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGGTAGCATCGTAttt                                                                                 >  1:197718‑M1/81‑143 (MQ=255)
                                                             aCCAAAATCAAGCTGGTACTGTGCAGGGACTTCAAAATGCTGGGTTGTGTGTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTa                                                                               <  1:35684/143‑1 (MQ=255)
                                                             aCCAAAATCAAACTGGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTa                                                                               <  1:596619/143‑1 (MQ=255)
                                                               agcgaacctgttcagcaggcgactgccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGc                                                                             >  1:26807‑M1/77‑143 (MQ=255)
                                                                gtgaacctgttcagcaggcgactgccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGcc                                                                            >  2:451206‑M1/76‑143 (MQ=255)
                                                                   aTCAAACTGGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCcag                                                                         >  2:294935/1‑143 (MQ=255)
                                                                   aTCAAACTGGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCcag                                                                         <  2:97224/143‑1 (MQ=255)
                                                                     cctgttcagcaggcgactgccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAACTATTGTTAGCATCGTATTTTCGCCcagca                                                                       <  2:634990‑M1/73‑1 (MQ=255)
                                                                        gttcagcaggcgactgccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTc                                                                    <  1:497883‑M1/76‑1 (MQ=255)
                                                                         ttcagcaggcgactgccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTcc                                                                   >  1:261034‑M1/67‑143 (MQ=255)
                                                                           acccagtctactgccttgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCTGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCAc                                                                 >  2:587186‑M1/65‑143 (MQ=255)
                                                                            agcaggcgactgccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCAcg                                                                <  2:404807‑M1/80‑1 (MQ=255)
                                                                             tACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCAcgc                                                               >  2:537493/1‑143 (MQ=255)
                                                                             gcaggcgactggcgcgcacgtagcgccaggtttaacagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCAcgc                                                               >  1:143078‑M1/63‑143 (MQ=255)
                                                                                 gtgCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGGATACATCGTTGCCAGGTACATATTGTTAGCATCGTGTTTTAGGCACGCACTCCACTCGTCt                                                           >  2:569621/1‑143 (MQ=255)
                                                                                    actgccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCt                                                        >  1:348785‑M1/56‑143 (MQ=255)
                                                                                     aGTGACTTCAGAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCtt                                                       <  2:388475/143‑1 (MQ=255)
                                                                                      tgccgcggacggagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCttt                                                      >  2:110733‑M1/54‑143 (MQ=255)
                                                                                      tgccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCttt                                                      <  1:606734‑M1/90‑1 (MQ=255)
                                                                                        ccgcgcacgtagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGCATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTAt                                                    <  2:346555‑M1/92‑1 (MQ=255)
                                                                                                 tagcgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTATGCTTTATCACCACccg                                           <  2:193536‑M1/101‑1 (MQ=255)
                                                                                                  agctccaggtttaaaagcgtcgcggtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACccgc                                          >  2:619368‑M1/42‑143 (MQ=255)
                                                                                                    cgccaggtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCGGTCCACGCGTCTGCTTTATCACCACccgccg                                        <  1:187370‑M1/104‑1 (MQ=255)
                                                                                                     tGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCcgccgc                                       >  1:193136/1‑143 (MQ=255)
                                                                                                         ttttGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCTACGCGTCTGCTTTATCACAACCCGGCGCAGTa                                   >  2:120911/1‑143 (MQ=255)
                                                                                                         ggtttaaaagcgtcgatgtccagtagaggagaagCGGGGTCATATTACGCGTTTCTGAATACACGGTAGCCAGATAAATATTGTTAGCATCGTATTTTAGCCGAGCAGTCCACGCATCTGCTTAATCACCACCCGCCGCAGTa                                   <  2:328776‑M1/109‑1 (MQ=255)
                                                                                                          gtttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTAt                                  <  1:472144‑M1/110‑1 (MQ=255)
                                                                                                           tttaaaagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATg                                 >  1:615199‑M1/33‑143 (MQ=255)
                                                                                                                aagcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGCTtac                            <  1:324223‑M1/116‑2 (MQ=255)
                                                                                                                 agcttcgatgtccagtagtggagaagCGGGGTCAGATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAAc                           >  1:486428‑M1/27‑143 (MQ=255)
                                                                                                                 agcgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAAc                           >  1:525355‑M1/27‑143 (MQ=255)
                                                                                                                   cgtcgatgtccagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTCGCATCGGATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCt                         >  1:93949‑M1/25‑143 (MQ=255)
                                                                                                                   cacaGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACAAGGTTGCCAGGTAAATATTGTTCGCATCGTATATTAGCCCAGCAGTCCACGCGTCTGCTTTATCAACACCCGCCGCAGTATGGTTAAccc                         >  2:99457/1‑142 (MQ=255)
                                                                                                                    ggcgatgtccggtagtggagaagCGGGGTCATATTACGCGGTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTg                        >  2:583503‑M1/24‑143 (MQ=255)
                                                                                                                    acaGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTg                        <  1:7326/143‑1 (MQ=255)
                                                                                                                     caGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTgg                       >  1:601462/1‑143 (MQ=255)
                                                                                                                        cATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTATAGCCCAGCAGTCCACGCGTCTCATGCATCACCACCCGCCGCACTATCGTCACCATGGTCa                    >  2:516567/1‑143 (MQ=255)
                                                                                                                          tAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCAtt                  <  1:380527/143‑1 (MQ=255)
                                                                                                                           tccagtagtggggaagCGGGGTCATAGTACGCGTTTCTGAACACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTg                 >  2:623522‑M1/17‑143 (MQ=255)
                                                                                                                            ccagtaggggcgaagCGGGGTCATATTACTCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTgg                >  1:367679‑M1/16‑143 (MQ=255)
                                                                                                                             cagtagtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCCTTATCACCACCCGCCGCAATATGGTTAACCTGGTCATTGGt               <  1:611565‑M1/129‑1 (MQ=255)
                                                                                                                                 agtggagaagCGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCgg           >  1:404807‑M1/11‑143 (MQ=255)
                                                                                                                                       cAAACGGGCTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCagaa     <  1:290652/143‑1 (MQ=255)
                                                                                                                                        agaCGGGGTCAGATTGCGCGTTTCTGAGTACGTGGTTGCCAGGTAAATATCGTTAGCATCGTATTTTAGCTCTTCATTCCACGCGTCTGGTTTAGCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCagaag    <  2:572456/141‑1 (MQ=255)
                                                                                                                                          aCGGGGTCATATTACGCGTGTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAagag  <  1:395268/143‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                             
CACCACCCGCAGCGTGCAGGTCACGGCCTTTAGACATCAGGAAAGAGACTGCCGGACGCAGACCAAAATCAAACTGGTACTGTGCAGTGACTTCAAAATTCTGGGTTTTGTTTGCCACAGCATAATCGCTGTCGCCAAACGGGGTCATATTACGCGTTTCTGAATACATGGTTGCCAGGTAAATATTGTTAGCATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAG  >  NC_000913/1435957‑1436237

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.