| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1886815 = | 22 (0.660) | 3 (0.100) | 3/242 | NT | 13.0% | intergenic (+5/+49) | yeaX/rnd | carnitine monooxygenase subunit YeaX/RNase D |
| ? | NC_000913 | 1886858 = | 20 (0.660) | intergenic (+48/+6) | yeaX/rnd | carnitine monooxygenase subunit YeaX/RNase D | |||||
TGCGAAACAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCA‑ATATTTTAGCGATGAAGAGCGTGCCAGCCA‑GCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCT > NC_000913/1886676‑1886952 | tGCGAAACAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCA‑ATATTTTAGCGATGAAGAGCGTGCCAGCCG‑GCAAAGTATGTTGATCTGTTGTTCGCGTCCGAAGGGTAAACGACTGGTGTTGGATTTGTAGTTTGCCGa > 2:394602/1‑143 (MQ=255)tGCGAAACAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCA‑ATATTTTAGCGATGAAGAGCGTGCCAGCCA‑GCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGa > 1:524114/1‑143 (MQ=255)tGCGAAACAGCAATACTGGAAGGTGAAGCTGACCATAGGGCTGAGATA‑AGTATGAAGGAATGGCGTG‑TAGCTATGCAAGATATGTTGATCTGTTGTTCGGGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGa > 1:305669/1‑143 (MQ=255) ggcaaagcaagcatctgcgcaactggcccgggaaactgaaaccgcagaacaatttgccggagctgatttccggctggcgtggtgagctgatggcggaagcattacacaatttattgcaggaatatccgcagtaaaatcttCCg > 2:405521‑M1/141‑143 (MQ=255) gcaaatcaaccaactgctgaactggcactggaaactgaaaccgcagaacaatttgccggagctgatttccggctggcgtggtgagctgatggcggaagcattacacaatttattgcaggaatatcagcagtacaatcttCCGa < 1:239912‑M1/4‑1 (MQ=255) aatcaaccaactgctgaactggcactggaaactgaaaccgcagaacaatttgccggagctgatttccggctggcgtggtgagctgatggcggaagcattacacaatttattgcaggaatatccgcagtaaaatcttCCGAAGc < 2:305669‑M1/7‑1 (MQ=255) atcaaccaactgctgaactggcactggaaactgaaaccgcagaacaatttgccggagctgatttccggctggcgtggtgagctgatggcggaagcattacacaatttattgcaggcatatcggaagaaacattgtCCGAAGcc < 2:565758‑M1/8‑1 (MQ=255) tcacacacctgctgaactggcaccggaaactgaaaccgcagaacgattggccggagctgatttccggctggcgtggtgagctgatggcggaagcattacacaatttattgcaggaatatccgcagtaaaatcttCCGAAGCCg > 1:104359‑M1/135‑143 (MQ=255) aGCAATACTGGAAGGTGAAGCGGACCACCGGGATCA‑ATATGTTAGCGATGAAGAGCGTGCCAGCCA‑GCAAAGTATGTTGATGTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGAt < 1:105661/143‑1 (MQ=255) gCAATACTGGAAGGTGAAGCTGACCATCGGGATCA‑ATATTTTAGCGATGAAGAGCGTGCCAGCCA‑GCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGAtg > 2:319009/1‑143 (MQ=255) aaTACTGGAAGGTGAAGCTGACCATCGGGATCA‑ATATTTTAGCGATGAAGAGCGTGCCAGCCA‑GCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGAtgtg > 2:338025/1‑143 (MQ=255) aTACTGGAAGGTGAAGCTGACCATCGGGATCA‑ATATTTTAGCGATGAAGAGCGTGCCAGCCA‑GCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGGTGGAGTTGTAGTTTGCCGAAGCCGGCTGTgg > 2:41268/1‑143 (MQ=255) gagtgttaaGCTGACCATCGGGATCA‑ATATTTTAGCGATGAAGAGCGTGCCAGCCA‑GCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGa < 1:646531/136‑1 (MQ=255) aaGGTGAAGCTGACCATCGGGATCA‑ATATTTTAGCGATGAAGAGCGTGCCAGCCA‑GCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGAGTTGTAGTTTGCCGAGGCCGGATGGGGCGCTGAg > 2:618740/1‑143 (MQ=255) aCCATCGGGATCA‑ATATTTTAGCGATGAAGAGCGTGCCAGCCA‑GCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTcc > 2:239912/1‑143 (MQ=255) aactgcgccgtacaattggccggagctgatttccggctggcgtggtgagctgatggcggaagcattacacaagttattgcaggaatatccgcagtaaaatcttCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCtt > 1:86559‑M1/104‑143 (MQ=255) gATGAAGAGCGTGCCAGCCA‑GCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCgg > 1:190985/1‑143 (MQ=255) aTGAAGAGCGTGCCAGCCA‑GCACAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGa < 1:46757/143‑1 (MQ=255) ccggagctgatttccggctggcgtggtgagctgatggcgtaagcattacacaatttattgcaggaatatccgcagtaaaatctaCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGa > 1:168119‑M1/85‑143 (MQ=255) gaacacagTGCCATCCA‑GCAAAGTATGTTGCTCTGCTGTTCGCGTGCGAAGGGTAACCGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGTCGCTGAGCGCGCCCAGTCCACCTTCTTGAGATTTTACTGCGGata < 2:400976/136‑1 (MQ=255) cGTGCCAGGCA‑GCAAATCGTGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGGAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTg < 2:100754/143‑1 (MQ=255) gcca‑gcAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATaaa < 2:16337/143‑1 (MQ=255) cca‑gcAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATacag > 2:163946/1‑140 (MQ=255) cca‑gcAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAAt > 1:565758/1‑143 (MQ=255) tCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGcc > 1:424731/1‑143 (MQ=255) ggttgttCGCGGGCGAAGGGTAAGCGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCAt < 2:558605/142‑1 (MQ=255) tgttCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAg < 1:319009/143‑1 (MQ=255) gcgTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTcac > 1:334167/1‑143 (MQ=255) cgTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGCAGATTGAAATGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTcacc > 1:302199/1‑143 (MQ=255) gTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTcacca < 1:38886/143‑1 (MQ=255) gCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACg < 1:373880/143‑1 (MQ=255) ccTGGTGTTGGCTTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCa < 2:158399/143‑1 (MQ=255) gaatatccgcagtaaaatcttCCGAAGCCGGATGTGACGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGc < 1:423897‑M1/122‑1 (MQ=255) gTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCt < 2:424731/143‑1 (MQ=255) | TGCGAAACAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCA‑ATATTTTAGCGATGAAGAGCGTGCCAGCCA‑GCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCT > NC_000913/1886676‑1886952 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |