New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1886815 =	22 (0.660)	3 (0.100)	3/242	NT	13.0%	intergenic (+5/+49)	yeaX/rnd	carnitine monooxygenase subunit YeaX/RNase D
	?	NC_000913	1886858 =	20 (0.660)					intergenic (+48/+6)	yeaX/rnd	carnitine monooxygenase subunit YeaX/RNase D

GATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCGGTTTCAGTTTCCAGTGCCAGTTCAGCAGTTGGTTGATTTGCC  >  NC_000913/1886730‑1886997                                                                                                                                 |                                                                                                                                            gATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCgg                                                                                                                               >  1:190985/1‑143 (MQ=255)  ccggagctgatttccggctggcgtggtgagctgatggcgtaagcattacacaatttattgcaggaatatccgcagtaaaatctaCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGa                                                                                                                              >  1:168119‑M1/85‑143 (MQ=255)  aTGAAGAGCGTGCCAGCCAGCACAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGa                                                                                                                              <  1:46757/143‑1 (MQ=255)    gaacacagTGCCATCCAGCAAAGTATGTTGCTCTGCTGTTCGCGTGCGAAGGGTAACCGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGTCGCTGAGCGCGCCCAGTCCACCTTCTTGAGATTTTACTGCGGata                                                                                                                            <  2:400976/136‑1 (MQ=255)       gctgatttccggctggcgtggtgagctgatggcggaagcattacacaatttattgcaggaatatccgcagtaaaatcttccgaagccggactgggcgcgctcagcgtcacatccggcttcggAAGATTTTACTGCGGATATTc                                                                                                                         <  1:423897‑M2/21‑1 (MQ=255)          cGTGCCAGGCAGCAAATCGTGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGGAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTg                                                                                                                      <  2:100754/143‑1 (MQ=255)                 gccagcAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATaaa                                                                                                               <  2:16337/143‑1 (MQ=255)                  ccagcAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATacag                                                                                                              >  2:163946/1‑140 (MQ=255)                  ccagcAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAAt                                                                                                              >  1:565758/1‑143 (MQ=255)                                   tCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGcc                                                                                             >  1:424731/1‑143 (MQ=255)                                     ggttgttCGCGGGCGAAGGGTAAGCGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCAt                                                                                           <  2:558605/142‑1 (MQ=255)                                        tgttCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAg                                                                                        <  1:319009/143‑1 (MQ=255)                                             gcgTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTcac                                                                                   >  1:334167/1‑143 (MQ=255)                                              cgTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGCAGATTGAAATGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTcacc                                                                                  >  1:302199/1‑143 (MQ=255)                                               gTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTcacca                                                                                 <  1:38886/143‑1 (MQ=255)                                                 gCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACg                                                                               <  1:373880/143‑1 (MQ=255)                                                               ccTGGTGTTGGCTTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCa                                                                 <  2:158399/143‑1 (MQ=255)                                                                 gaatatccgcagtaaaatcttCCGAAGCCGGATGTGACGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGc                                                               <  1:423897‑M1/122‑1 (MQ=255)                                                                      tccgcagtaaaatcttccgaagccggactgggcgcgctcagcgccacatccggcttcggTAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTACGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCgg                                                          >  1:168119‑M2/60‑143 (MQ=255)                                                                                 gTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCt                                               <  2:424731/143‑1 (MQ=255)                                                                                   tcggCGAAGCCGGATGTGCCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGc                                             >  2:469837‑M1/5‑143 (MQ=255)                                                                                       CGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCGGtt                                         >  1:394602‑M1/1‑143 (MQ=255)                                                                                         aagccggactgggcgcgctcagcgccacatccggcttcggAAGATTTTACTGCGGATATTCCTGCAATAACTTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCCAATTGTacggcgcagtt                                       >  1:86559‑M2/41‑138 (MQ=255)                                                                                            CCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCGGTTTCAGt                                    <  1:228292‑M1/143‑1 (MQ=255)                                                                                                   tgGCGCTCAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCGGTTTCAGTTTCCAGt                             <  1:646898/143‑1 (MQ=255)                                                                                                    ggCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCGGCTCCGGCAAATTGTTCTGCGGTTTCAGTTTCCAGTg                            <  1:338025/143‑1 (MQ=255)                                                                                                     gcgcTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCGGTTTCAGTTTCCAGTGc                           >  1:465858/1‑143 (MQ=255)                                                                                                           aGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCGGTTTCAGTTTCCAGTGCCAGTTc                     <  1:504466/143‑1 (MQ=255)                                                                                                                  ccAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCGGTTTCAGTTTCCAGTGCCAGTTCAGCAgtt              <  2:334167/143‑1 (MQ=255)                                                                                                                        cggcttcggAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCCAATCGTTCTGCGGTTTCAGTTTCCGGTGCCAGTTcagcaggtgtgtga        >  1:104359‑M2/10‑138 (MQ=255)                                                                                                                         ggcttcggACAATGTTTCTTCCGATATGCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCGGTTTCAGTTTCCAGTGCCAGTTCAGCAGTTGGTTGAt       <  2:565758‑M2/135‑1 (MQ=255)                                                                                                                          gcttcggAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCGGTTTCAGTTTCCAGTGCCAGTTCAGCAGTTGGTTGAtt      <  2:305669‑M2/136‑1 (MQ=255)                                                                                                                             tcggAAGATTGTACTGCTGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCGGTTTCAGTTTCCAGTGCCAGTTCAGCAGTTGGTTGATTTGc   <  1:239912‑M2/139‑1 (MQ=255)                                                                                                                              cggAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCGGTTTCAGTTTCCCGGGCCAGTTGCGCAGATGCTTGCTTTGcc  >  2:405521‑M2/4‑143 (MQ=255)                                                                                                                                 |                                                                                                                                            GATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCGGTTTCAGTTTCCAGTGCCAGTTCAGCAGTTGGTTGATTTGCC  >  NC_000913/1886730‑1886997

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.