| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 572471 | 58 (1.070) | 17 (0.410) +TGATCTTACCCAGCAATAGTGGACACGCGGCTAA |
12/214 | 2.6 | 33.0% | coding (6/456 nt) | ybcN | DLP12 prophage; DNA base‑flipping protein |
| ? | NC_000913 | = 2170235 | 33 (0.610) | noncoding (65/1258 nt) | IS3 | repeat region | |||||
ACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/572331‑572471‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGG < NC_000913/2170235‑2170180 |||||||||||||||||||||||||||||||||| acgacgCCGGTGACTTCTGCGCTAGACGGGGACGTTGAGGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTG < 2:227360/137‑1 cagCTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGA < 1:390501/140‑1 aatTCCGGTGACTTCTGCGCTAGACGGGGCCGTTTATGCGCACATACAATCCAAACTCTCTTCTCCGTTCACAGATGCTGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGAT < 2:371261/140‑1 acgCCGGTTACTTCTGCTCGACTCGGGGACGTTTATGCGCACATACACTCCAACCTCTCTTCCCCCTTCACATATGCAGAAATGCACCTGCAATTCTTTGCATCTACCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATC < 1:434565/140‑1 cctGTGACTTCTGCGCTAAACGGGGACGTGTATGCGCACAGACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTA < 1:342987/140‑1 ggcGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAACCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCCTGAACTGATCTTACC < 2:843516/140‑1 ctcCGCTAAACGTGGACGTTTAGTCGCACATACAATCCAAACTCGCGGCTCCCCTCCCACATGCAGAAATCCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATA < 1:778121/140‑1 cggTAAACGGGGACGTTTATGCGCACATACAATCCAAACGCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTG < 1:570391/140‑1 gctaccCGGGGACGTTTATGCGCACATACAAGCCAAACTCTCTTCTCCCTTCACAGATGCAGAGATGCACCGGCAATACTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGG < 2:118823/137‑1 gcgAAACGGGGACGTTTATGCGCACATACAATCCAACCCCTCTGCTCCCCTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGG < 2:284042/140‑1 gcgAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCGTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGG < 2:69796/140‑1 gcgAAACGGGGACGTTGATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCAGCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGG < 1:851098/140‑1 ctcAACGGGGACGTTTATGCGCACCTACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCGCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGA < 2:915160/140‑1 ggtACGTGTATGCTGACATACATTCCAGTGTCTCTTCGCCCTTCCCAGATGCAGACATGGACCTGCAATTATTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGG < 2:752837/140‑1 actTTTATCCGCACCTACAATCCAACCCCCCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTG‑GGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAA < 2:630504/140‑1 ctgttcTGCGCACATACAATCCCAACTCTCTTCGCCCTTTCCAGATGCAGATATGCACCTGCAATTCTTTGCATCTAGCGTTTGCCCTCTGCGGTGCAGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAA < 2:974633/137‑1 cgtctcTGCGCACGCACAATCCCACCTGCCCTCTCCCTTCACAGAAGCAGAAACGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAA < 1:164233/137‑1 cggTTATGCGGACATGGGAGCCAAACGCTCTTCTCCCGTCGCGGATGCAGAAATGCACCTGCAATTCTGTGCATCTAGCGTTTGAGCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAA < 1:425423/140‑1 cggTTATGCGCAGATACGCTCTATTCTCTCTTCTCCCTTCCCAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAA < 2:928567/140‑1 cgaTTAAGCGGACAAGCAATCCAAACACTCTGCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAA < 1:203643/140‑1 ttgATGCGCACCTACAATCCAAGCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGT < 2:601580/140‑1 ttgATGCGCACATACAATCCAAACTCTCTTCGCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTGGCAGCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGT < 2:721667/140‑1 tagGCGCACATACGGTCCGGGCTCTCGTCTCCCTTCACAGATGCAGAGATGCGCCTGCGAGTCTGTGCATCTAGCGTTTGACCTCGGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGA < 2:274416/140‑1 tagGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGA < 1:963357/140‑1 attCGCACATACTATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAG < 2:306377/140‑1 TACAATCCAAACTCTCTTCTCCCTTCACAGACGCAGAACTGCACCTGCAATTCTTTGCATCTAGCGTCTGACCTCTGCGGCGGGGAAGCGTGCACTGATCTTACCCAGCAATAGTGGGCACGCGGCTACGTGAGTCAaccctc > 2:429076/1‑137 TCCAAACTCTCTTCTCCCTTCACAGATACAGAAATTCTCCTGCAATTCTTTGCACCTATCGCTTGACCTCTGCGGTGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTTACCTCTctgtca > 2:604935/1‑137 TCTCTTCCCCCTTCCCAGATGCAGAGATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTCACCTCTGACTGAGAGTTTA < 2:118124/143‑1 CCCTTCACAGCGGCAGAAGTGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTCACCTCTGACTGAGAGTTTACTCACTTA < 2:868131/143‑1 CCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGACCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTCACCTCTGACTGAGAGTTTACTCACTTA < 2:753028/143‑1 CCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAG < 2:15485/143‑1 ctgCACAGATGCAGCAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCACTAGTGGACACGCGGCTAAGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGC < 1:521482/140‑1 cgTCACAGGTGCCGAAATGCACCTGCAATTCTTTGCAGCTAGCGTTTGACGTCTGGGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGGGGACACGCGGCTAAGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGC < 2:919934/141‑1 CTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGC < 1:738573/143‑1 TTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCC < 2:711833/143‑1 GCAGAAATGCACCTGCAATTCTTTGCATCTTGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCA < 1:414662/143‑1 ACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACTGATCTTACCCAGAGATAGTGGACACGCGGCTAAGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGG < 2:169268/143‑1 |||||||||||||||||||||||||||||||||| ACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/572331‑572471‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGG < NC_000913/2170235‑2170180 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |