New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 566777 =NA (NA)576 (32.140) 200/262 NT 97.3% noncoding (1/1258 nt) IS3 repeat region
?NC_000913 = 572471 16 (0.890)coding (6/456 nt) ybcN DLP12 prophage; DNA base‑flipping protein

Only 100 of 636 total aligned reads displayed.

AGCTTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/566918‑566777
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCACCGGAGTTGTTC  <  NC_000913/572471‑572329
                                                                                                                                                                                                                                                                                             
AGCTTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTGTTGCTTGGTAAGATCAG                                                                                                                                                >  1:38812/1‑143
  CTTCAGGGCTTCACTTCGAAATTCAGGCTAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTT                                                                                                                                              <  1:51756/143‑1
  CTTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGATTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTCGCTGCGTGTCCACTATTGCTGGGTAAGGTCAGTT                                                                                                                                              >  1:226515/1‑143
   TTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTC                                                                                                                                             >  1:74302/1‑143
     tAGGGCTTCAGTGGGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCAC                                                                                                                                           <  2:262758/142‑1
       GGGCTTCACTGTGAAATTCAGGCGAAGGCAGGTTACGGGGTTGAGGACTGGTGGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGC                                                                                                                                         <  1:184599/143‑1
        gaCTTCACTGAGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCAACTCTGACTGAGGGTTTATTCCCTTATCCGCGTGGCCACGACTGCTGGGTAAGAGCAGTTCACGCT                                                                                                                                        >  2:265770/3‑143
         GCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCGCTTAGCCCCGCGACCACCATCACTCGGTAAGCTCCGTTCACGCgt                                                                                                                                       >  2:361661/1‑141
          CTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGAGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTC                                                                                                                                      >  1:347669/1‑143
           TTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGCGTAAGATCAGTTCACGCTTCC                                                                                                                                     >  2:164513/1‑143
                TGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGTCGCAGGCCCTCTATTGCTGGGTAAGGTCAGTTCACGCTTCCCATCC                                                                                                                                >  1:203560/1‑143
                TGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCC                                                                                                                                >  1:138586/1‑143
                  CGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATCCTGTTTTTGTCATGTGAGTCACCTCTGACTGAGTGTTTACTCACTTTGCCGCGTGTCCACTATTGCTGGGTAAAATAATTTCACGCTTCGCCTCCGC                                                                                                                              >  1:207484/1‑143
                  CGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGg                                                                                                                              >  2:53585/1‑142
                  CGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGC                                                                                                                              >  1:254157/1‑143
                    AAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAG                                                                                                                            >  1:280154/1‑143
                      atggcGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAG                                                                                                                          <  2:69433/138‑1
                      ATTCAGGCGAATTCTGTGTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAG                                                                                                                          <  1:194807/143‑1
                       TTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCCGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAcg                                                                                                                         >  2:149697/1‑141
                        gCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGT                                                                                                                        <  1:93155/142‑1
                            GCGAATGCTGTTCACGGGGTTTTTTACTGGTTAATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCACTCCGCAGGGGTCAAA                                                                                                                    >  2:188780/1‑143
                              GAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACG                                                                                                                  >  1:210174/1‑143
                               AATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGC                                                                                                                 >  1:246346/1‑143
                                 TGCTGTTTTTGTGGTTTTTTACTGGTTGTTACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTGCTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTA                                                                                                               <  1:36261/143‑1
                                 TGCTGTTTGCGGGGTTTTTTACTGGTTGATACTGTCTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTA                                                                                                               <  2:105956/143‑1
                                  GCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAG                                                                                                              >  2:231902/1‑143
                                       TTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCA                                                                                                         <  2:222891/143‑1
                                            GGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAA                                                                                                    <  2:35602/143‑1
                                              GTTTTTTACTGGTTGATACTGTTTTTGTCATGTTAGTCTCCTCTGACTGATAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATT                                                                                                  <  1:358451/143‑1
                                                 TTTTACTGGTTGTGACTGTTTTTGTCATGTGAGTCCCCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACGATTGCTGGGTAAGATCAGTTCACGCGTCCCCTCCGCAGAGGTCGAACGCTAGATGCAAAGAATTGga                                                                                               <  2:79708/143‑3
                                                  tttatgGGTTGCTACTGTTTTTGTCATGTGAGTCCCCTCTGCCTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAG                                                                                              <  2:240888/137‑1
                                                  TTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAG                                                                                              >  2:325852/1‑143
                                                   TTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGG                                                                                             >  1:108153/1‑143
                                                      CTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGC                                                                                          <  1:171451/143‑1
                                                       TGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGGTGGGCAAGATCAGTTCACGCTTCGCCTCCGCGGAGGTCAACCGCTCGATGCAATGCACTGCAGGTGCc                                                                                         >  1:25939/1‑142
                                                          TTGATATTGTGTTTGTCATTTGTGTTACTTCTGACTGAGAGTTTACTCACTTATCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGTTTTCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTT                                                                                      <  2:123110/143‑1
                                                             ATACTGTTTTTGTCATGTTAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTG                                                                                   <  1:231567/143‑1
                                                             ATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCCGAGGCCCAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTG                                                                                   >  1:48285/1‑143
                                                             ATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTG                                                                                   <  2:154174/143‑1
                                                              TACTGTTTTTGTCATGTGAGGCACCGCTGACTGAGAGTTTCCTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGC                                                                                  <  1:294528/143‑1
                                                                cttTTTTTGTCATGTGAGTCACCTCTGACTGAGTGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTTCGCTCCGCAGAGGTTAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCAT                                                                                <  2:116100/140‑1
                                                                 TGTTTTTGTCATGTGAGTAAGTTCTGACAGAGAGACTACTCACTTAGCAATGGTTCCACTATTGCTGGGTCAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCAGTTCTGCATC                                                                               >  1:266462/1‑143
                                                                   TTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTATCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTCGATGCAAAGAATTCCACGTGCATTTCTGCCTCTG                                                                             >  1:152599/1‑143
                                                                    TTTTGTCATGTGAGTCATCTCTGTCTGATTGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGT                                                                            <  1:133827/143‑1
                                                                    TTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCTACTATTGCTGGGTAAGATGAGTTCACGCTTCCCCTCCGCAGAGGTTAAACGATAGATGCAAAGAATTGCAGGTGCATTTCTACATTTGT                                                                            >  2:145328/1‑143
                                                                    TTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGT                                                                            <  2:340550/143‑1
                                                                    TTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAAGTGCATTTCTGCATCTGT                                                                            <  1:344208/143‑1
                                                                     TTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGCTGCCTTTCTGCATCTGgg                                                                           >  2:206607/1‑141
                                                                        GTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAG                                                                        >  2:291717/1‑143
                                                                           ATGTGAGTCACCTCTGACTGACAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGTGTAAGTTCAGTTCACGATTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGA                                                                     <  1:116329/143‑1
                                                                            cGTGAGTCACCTCTAGCGGAGAGGTTACACACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAAAGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAG                                                                    <  1:68747/142‑1
                                                                             tTGAGTCGTCTCTGACTGAGAGTTTACTCATTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGTAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGA                                                                   <  2:18015/142‑1
                                                                             GTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCACAGACTGGCAGGTGCATTTCTGCATCTGCGAcgagaaa                                                                   >  1:9856/1‑136
                                                                             GTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGA                                                                   >  1:332242/1‑143
                                                                             GTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGA                                                                   <  2:27765/143‑1
                                                                              tgtGTCACCTCTGACTGAGTGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCATAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAA                                                                  <  2:29711/140‑1
                                                                              TGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAA                                                                  <  2:287483/143‑1
                                                                                    ACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGT                                                            >  1:162859/1‑143
                                                                                     CCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTT                                                           <  1:236113/143‑1
                                                                                      cccaGACCGAGAGAATAGTCACCAAGCCGCGTGCCCACTATTGCTGCGTAAGATCAGTTCCCGCCTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTT                                                          <  1:84837/139‑1
                                                                                      cacaGACAGAGAGTTCCCTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTT                                                          <  1:322359/139‑1
                                                                                      CTCTGGCTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGGTGGGTAAGATCAGTTCACGTTTCCCCTCCGCAGATGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTT                                                          <  2:218530/143‑1
                                                                                      CTCTGATGGAGTGTTTTCTCACTTAGCCGCGTCTCCACTATTGCTGGGTAAGATCAGTTCTCGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTT                                                          <  2:252159/143‑1
                                                                                       TCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATAGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTG                                                         >  1:312602/1‑143
                                                                                        CTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTATGG                                                        >  2:304490/1‑143
                                                                                         ttgCTGGGAGTTTCTTCCCTTATCGTCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCATAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTTCATCTGTGAAGGGAGAAGAGAGTTTGGA                                                       <  2:33215/140‑1
                                                                                         gGACTGAGAGTTTACTCACGTAGCCTCGTGTCCACTAGTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGA                                                       <  2:133211/142‑1
                                                                                          GACTGGGCGTTTCCTCACTTACCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCGCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGTTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGAT                                                      <  2:196788/143‑1
                                                                                           ACTGAGAGTTTACTCACTTAGCCGCGTGTCCACGATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATT                                                     <  1:31948/143‑1
                                                                                              GAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGCTGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGCAGAGAGTTTGGATTGTA                                                  >  2:168157/1‑143
                                                                                                GAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGCGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATG                                                >  2:211489/1‑143
                                                                                                  GTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTG                                              >  1:143788/1‑143
                                                                                                       CTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCct                                         >  1:126005/1‑141
                                                                                                       CTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCAT                                         >  2:345040/1‑143
                                                                                                       CTCACTTAGCCGCGTGTCCACTATGGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCAT                                         <  1:219247/143‑1
                                                                                                        TCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGCGTTTGGATTGTATGTGCGCATA                                        >  1:270667/1‑143
                                                                                                        TCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTGGGGTTGGATGTGCGCGTA                                        >  2:244790/1‑143
                                                                                                         CACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGCATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAA                                       >  1:328589/1‑143
                                                                                                           CTTAGCCTCTTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCGCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAAC                                     <  1:62318/143‑1
                                                                                                           CTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCCGGTGCATTTCTGCATCTGAGAAAGAAGAAAAGAGTAATGTTTGTATTTGAGCATAAAC                                     >  1:10150/1‑143
                                                                                                            TTAGCCGCATGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGGTGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACG                                    >  2:138583/1‑143
                                                                                                             TAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAATGGAGCAGAGAGTTTGGATTGTATGTGAGCATAAAaat                                   >  1:169813/1‑140
                                                                                                                  GCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGACGGGAGCAGAGAGTTTGGATTGAATGTGCGCATAAACGTCCCCG                              >  1:175766/1‑143
                                                                                                                  GCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGCAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCG                              >  1:302019/1‑143
                                                                                                                       TCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGCGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAG                         >  2:127791/1‑143
                                                                                                                         CACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCG                       <  1:288397/143‑1
                                                                                                                          ACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGC                      >  1:337979/1‑143
                                                                                                                           CTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCA                     <  1:199491/143‑1
                                                                                                                            TATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCAGTTTAGCGCAG                    >  2:61337/1‑143
                                                                                                                                 CTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTC               >  1:352780/1‑143
                                                                                                                                  TGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCCGCATCTGTGAAGGGAGAAGAGAGTGTGGAGTGTATGTGCGCATAAACGTCACCGGTTAGCGCAGAAGACA              >  2:173966/1‑143
                                                                                                                                   gggcagGATCAGTGCCCGCTTCCCCTGCGCAGAGGTGAAACGCTAGATGCAACGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGCTTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCAC             <  2:365530/137‑1
                                                                                                                                   GGGCAAGATCAGTTTACGCGTCCCCTCCGTAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCAC             <  2:91967/143‑1
                                                                                                                                    GGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCACC            >  1:146912/1‑143
                                                                                                                                     GTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCACCG           <  2:270629/143‑1
                                                                                                                                     GTAAGATCAGTTAACGCTTCCCCTCCGCAGAGGGCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCACCG           <  1:179276/143‑1
                                                                                                                                         GATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCACAGGAGT       >  2:283330/1‑143
                                                                                                                                          ATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCACCGGAGTT      >  1:274956/1‑143
                                                                                                                                            CAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGAATGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCACCGGAGTTGT    >  1:80701/1‑143
                                                                                                                                             AGTTCACGCTTCCCCTCCGCGGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCACTGGAGTTGTT   <  2:48250/143‑1
                                                                                                                                                                                                                                                                                             
AGCTTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/566918‑566777
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCACCGGAGTTGTTC  <  NC_000913/572471‑572329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.