New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3540274 =	26 (0.890)	3 (0.110)	3/256	NT	11.1%	coding (112/228 nt)	feoA	ferrous iron transport protein A
	?	NC_000913	3540310 =	23 (0.810)					coding (148/228 nt)	feoA	ferrous iron transport protein A

ATATGAATGGGGTCGCCGAGTGGAGCGACGCGCACCACATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3540314‑3540274 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cattCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGATCTGGCCTTATTAGAAGTGGAAGCGGTTTCCTGTTAATACGGTGATAACAACAATGAAAAAATTAACCATTGGCTTAATTGGTAATCCAAATTCTGG  >  NC_000913/3540310‑3540450                                                                                                                                                                                        ATATGAATGGGGTCGCCGAGTGGAGCGACGCGCACCACATTCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGATCTGGCCTTATTAGAAGTGGAAGCGGTTTCCTGTTAATACGGTGATAACAACAATCAA                                         >  1:560906/1‑143  TATGAATGGGGTCGCCGAGTGGAGCGACGCGCACCACATTCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGATCTGGCCTTATTAGAAGTGGAAGCGGTTTCCTGTTACTACGTTGATAACAACAATGAAA                                        >  2:91203/1‑143   ATGAATGGGGTCGCCGAGTGGAGCGACGCGCACCACATTCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGATATGGCCGCATTAGAAGTGGAAGCGGTTTCCTGTTAATACGGTGATAACAACAATGAAAA                                       >  2:346377/1‑143                                       ATTCATGTCGTACCCTGTCGTGTGCGGCTGGTATTCCGCCAAAAATATCTGGCCTTATTAGAAGTGGAAGCGGTTTCCTGTTACTACGGTGATAACAACAATGAAAAAATTAACCATTGGCTTAATTGGTAATCCAAATTCTG   <  2:85828/143‑1                                        TTCGTATCTGAACCCGTCGTGTGAGGCTGGTATTACGCAAAAAAGATCTGGCCTTATTAGAAGTGGAAGCGGTTTCCTGTTAAGACGGTGATAACAACAATGAAAAAATTAACCATTGGCTTAATTGGTAATCCAAATTCTGG  <  2:514463/143‑1                                                                                                                                                                                        ATATGAATGGGGTCGCCGAGTGGAGCGACGCGCACCACATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3540314‑3540274 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cattCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGATCTGGCCTTATTAGAAGTGGAAGCGGTTTCCTGTTAATACGGTGATAACAACAATGAAAAAATTAACCATTGGCTTAATTGGTAATCCAAATTCTGG  >  NC_000913/3540310‑3540450

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.