New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3540274 =	26 (0.890)	3 (0.110)	3/256	NT	11.1%	coding (112/228 nt)	feoA	ferrous iron transport protein A
	?	NC_000913	3540310 =	23 (0.810)					coding (148/228 nt)	feoA	ferrous iron transport protein A

ATCCAGTTAATGAGAAACAAGTAGGCACCTATGCAATACACTCCAGATACTGCGTGGAAAATCACTGGCTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAAACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGATCTGGCCTTATTAGAAGTGGAAGCGGTTTCCTGTTAATACGGTGA  >  NC_000913/3540133‑3540398                                                                                                                                              |                                                                                                                             ccagaatttggattaccaattaagccaatggttaattttttcattgttgttatcaccgtcttaacaggaaaccgcttccacttctaataaggccagatcttttttgcgtaataccagcctcacacgacgggttcagatacgaa                                                                                                                             <  2:514463‑M1/2‑1 (MQ=255)  tCCAGTTAATGAGAAACAAGTAGGCACCTATGCAATACACTCCAGATACTGCGTGGAAAATCACTGGCTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAAACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTAAt                                                                                                                            <  1:475303/143‑1 (MQ=255)  cagaatttggattaccaattaagccaatggttaattttttcattgttgttatcaccgtagtaacaggaaaccgcttccacttctaataaggccagatatttttggcggaataccagccgcacacgacagggtacgacatgAAt                                                                                                                            <  2:85828‑M1/3‑1 (MQ=255)    cAGTTAATGAGAAACAAGTAGGCACCTATGCAATACACTCCAGATACTGCGTGGAAAATCACTGGCTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAAACTGCTTTCTGTTGGCACGTTAGCTGGCTCCTCTTTTAAtgt                                                                                                                          >  2:520213/1‑143 (MQ=255)         aaTGAGAAACAAGTAGGCACCTATGCAATACACTCCAGATACTGCGTGGAAAATCACTGGCTTTTCCCGTGAACTCAGCCCGGCATATCGCCAAAAACTGCTTTCTCTTGGCACGTTACCTGGCTCCTCTTTTAATGTGGTgc                                                                                                                     >  2:574639/1‑143 (MQ=255)         aaTGAGAAACAAGTAGGCACCTATGCAATACACTCCAGATACTGCGTGGAAAATCACTGGCTTTGCCCGTGAAATCAGCCCGGCATATCGCCAAACACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTAATGTGGTgc                                                                                                                     >  2:218990/1‑143 (MQ=255)               aaaCGAGTAGGGACCTATGCAATACACTCCAGATACTGCGTGGAAAATCACTGGCTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAAACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTAATGTGGTGCGCGTCg                                                                                                               <  2:1877/143‑1 (MQ=255)                      tAGGCACCTATGCAATACACTCCAGATACTGCGTGGAAAATCACTGGCTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAAACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTCATGTGGTGCGCGTCGCTCCACt                                                                                                        >  1:447839/1‑143 (MQ=255)                             cTATGCAATACACTCCAGATGCTGCGTTGAAAATCACTGGCTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAAACTGCTGTCTCTTGGCATGTTACCTGGCGCCTCTTGTAATGTGGTGCGCGTCGCTCCACTCGGCGAc                                                                                                 <  2:243448/143‑1 (MQ=255)                                 gCAATACACTCCAGATACTGCGTGGAAAATCACTGGCTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAAACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCa                                                                                             <  1:441497/143‑1 (MQ=255)                                      ttttcattgttgttatcaccgtattaacaggaaaccgcttccacttctaatgcggccatatcttttttgcgtaataccaggctcacacgacgggtttcgatatgAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCat                                                                                        >  2:346377‑M1/105‑143 (MQ=255)                                       tttcattgttgttatcaacgtagtaacaggaaaccgcttccacttctaataaggccagatcttttttgcgtaataccaggctcacacgacgggtttcgatatgAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCata                                                                                       >  2:91203‑M1/104‑143 (MQ=255)                                        ttgattgttgttatcaccgtattaacaggaaaccgcttccacttctaataaggccagatcttttttgcgtaataccaggctcacacgacgggtttcgatatgAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCatat                                                                                      >  1:560906‑M1/103‑143 (MQ=255)                                            cAGATACTGCGTGGAAAATCACTGGCTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAAACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTCTTAATGTGGGGCGCGGCCCCCCACTCCGCGACCCCATCCATCTCGaa                                                                                  >  2:171348/1‑143 (MQ=255)                                             aGATACTGCGTGGAAAATCACTGGCTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAAACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGaaa                                                                                 <  2:309677/143‑1 (MQ=255)                                                       tGGAAAATCACTGGCTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAAACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCgtgt                                                                       <  2:68435/143‑1 (MQ=255)                                                              tCACTGGCTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAAACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTCATGTGGTGCGCGTCGCTCCACTCCGCGCCCCCATTCCTATCGAAATCCGTCGTGTGAGCCTg                                                                >  1:349317/1‑143 (MQ=255)                                                              tCACTGGCTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAAACTGCTTTCTCTTGGCAGGTTACCTGGATCTTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCGTGTGAGGCTg                                                                >  1:331860/1‑143 (MQ=255)                                                                ccTGGTTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAGACTGTTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCGTGTGAGCCTGGt                                                              <  2:529506/142‑1 (MQ=255)                                                                aCTGGCTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAAACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCGTGTGATCCTggc                                                              >  1:575416/1‑142 (MQ=255)                                                                 cTGGCTTTTCCCGTGCAATCAGCCCGGCATATCGCCAAAAACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCGTGTGAGCCTGGTa                                                             <  1:490864/143‑1 (MQ=255)                                                                     cTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAAACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCGTGTGAGCCTGGTATTAc                                                         <  2:487347/143‑1 (MQ=255)                                                                               gAAATCAGCCCGGCATATCGCCAACAACTGCGTTCTCTTGCCATGTTACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGTCCCCATTCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGa                                               <  1:403033/143‑1 (MQ=255)                                                                                aaaTCAGTCCGGCATATCTCCAAAAACTGCTTGCTCGTGGCATGTTACCTGGCTCTTCTTTTAATGTGGGGCGCGTCGCTCCACTCGGCTACCCCATTCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGAt                                              <  2:58308/143‑1 (MQ=255)                                                                                     aGCCCGGCATATCGCCAAAACCTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGATCTGGc                                         <  1:199239/143‑1 (MQ=255)                                                                                           gCATATCGCCAAAAACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTAATGTGTTGCGCGTCGCTCCACTCGGCGACCCCACTCATATCGAAACCCCCCGTTTGAGCCTGGTATTACTCAAAAAAGATCTGGCcttctt                                   >  1:20917/1‑143 (MQ=255)                                                                                              tatCGTCAAAAACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGATCTGGCCTTATTAGa                                <  1:234561/143‑1 (MQ=255)                                                                                                   ccAAAAGCTGCTTTCTCTTGGCATGTTACCTGGCTCCTCGTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGATCTGGCCTTATTAGAAGTgg                           <  2:241000/143‑1 (MQ=255)                                                                                                             cTTTCTCTTGGCATGTTATGTGGATCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGATCTGGCCTTATTAGAAGTGGAAGCGGTTTc                 <  1:358066/143‑1 (MQ=255)                                                                                                                tctcCTGGCATGTCACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGATCTGGCCTTATTAGAAGTGGAAGCGGTTTCCTg              <  2:331860/143‑1 (MQ=255)                                                                                                                 ctctTGGCCTCTTACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGATCTGGCCTTATTAGAAGTGGAAGCGGTTTCCTGt             <  1:89070/143‑1 (MQ=255)                                                                                                                         aTGTTACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCGTGCGAGCCTGGTATTACGCAAAAAAGATCTGGCCTTATTAGAAGTGGAAGCGGTTTCCTGTTAATACgg     >  1:286821/1‑143 (MQ=255)                                                                                                                            ttACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCGTGTGCGCCTGGTATTACGCAAAAAAGATCTGGCCTTATTAGAAGTGGAAGCGGCTTCCTGTTAATACGGTGa  >  2:490462/1‑143 (MQ=255)                                                                                                                                              |                                                                                                                             ATCCAGTTAATGAGAAACAAGTAGGCACCTATGCAATACACTCCAGATACTGCGTGGAAAATCACTGGCTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAAACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGATCTGGCCTTATTAGAAGTGGAAGCGGTTTCCTGTTAATACGGTGA  >  NC_000913/3540133‑3540398

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.