| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 608008 = | NA (NA) | 22 (1.380) | 19/258 | NT | 61.1% | noncoding (2/1345 nt) | IS186 | repeat region |
| ? | NC_000913 | = 839235 | 14 (0.880) | intergenic (‑28/+14) | ybiX/fiu | PKHD‑type hydroxylase YbiX/putative iron siderophore outer membrane transporter | |||||
CCCGGCATTACGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/608151‑608008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggCGCAGGCCCCACTTTTTGGAGAAATTGTATGATGTACCACATTCCCGGCGTGTTATCGCCACAGGACGTCGCTCGTTTTCGCGAACAACTGGAACAAGCCGAATGGGTGGATGGACGCGTCACCACCGGCGCACAAGGTGCG < NC_000913/839235‑839094 CCCGGCATTATGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAAGCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGG < 2:137170/143‑1 CGGCATTACGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGaga > 1:87705/1‑140 TACGTGCCGAAGCATGCAGTTCTTCGTGCTTACCAATATGGGCCAGAATTGCGGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCGCAGGC < 2:46166/143‑1 ACGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCGCAGGCC > 1:186781/1‑143 ACGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCGCAGGCC > 1:287186/1‑143 CCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGAGAGAGAAAGGCGTTGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCGCAGGCCCCACT > 1:120126/1‑143 tTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCGCAGGCCCCACTTTTTG < 1:17624/142‑1 GTATCCAGTTCTTCGGGCTTACGAATATGGGGCGGGGGTCCCTACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCGCAGGCCCCACTTTTTG < 2:65901/143‑1 CGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGCGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCGCAGGCCCCACTTTTTGGAGAAATTGTATG > 1:256700/1‑143 CGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCAAAACCCTTAAGTTAGCGCTTATGGGCGCAGGCCCCACTTTTTGGAGAAACTGTATG > 2:279064/1‑143 GGGCTTCCCAAGCTGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCGCAGGCCCCACTTTTTGGAGAAATTGTATGA < 1:223903/143‑1 ACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCGCAGGCCCCACTTTTTGGAGAAATTGTATGATGTACC < 2:287186/143‑1 gcgtCAGAATTGCTGACCAGTTAACGTGATAGTAATTCATCGGCACGTTACATCATATCAGGCGCAATACCACAACCCTTAAGTTAGCGCTTATGGGCGCAGGCCCCACTTTTTGGAGACATCGTATGATGTACCACATTCCC < 2:281580/139‑1 CAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCGCAGGCCCCACTTTTTGGAGAAATTGTATGATGTACCACATTCCCGGCG < 1:50815/143‑1 TTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTCACGTTAGCGCTTATGGGCGCAGGCCCCACTTTTTGGCGAAATTGTATGATGTACCACATTCCCGGCGTGTTA < 1:2635/143‑1 gggCCAGTTACCGTGAGAGGAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCCCAACCCTTAAGTTAGCGCTTATGGGCGCAGGCCCCACTTTTTGGAGAAATTGTATGATGTACCACATTCCCGGCGTGTTATCGC < 2:29079/140‑1 TGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACCACCCTTAAGTTAGCGCTTATGGGCGCAGGCCCCACTTTTTGGAGAACTTGTATGATGTACCACATTCCCGGTGTGTTATCGC > 2:132163/1‑143 TCGTGAGAGTACTTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCCTAAGTTACCGCTTATGGGCGCAGGCCCCACTTTTTGGAGAAATTGTATGATGTACCACATTCCCGGCGTGTTATCGCCACAGGACGT < 1:28103/143‑1 GGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCGCAGGCCCCACTTTTTGGAGAAATTGTATGATGTACCACATTCCCGGCGTGTTATCGCCACAGGACGTCGCTCGTTTTCGCGAACA > 2:131346/1‑143 ATCAGGCGTTATACCACAACCCTTAAGTTAGCGCTTATGGGCGCAGGCCCCACTTTTTGGAGAAATTGTATGATGTACCACATTCCCGGGGTGTTATCGCCACAGGACGTCGCTCGTTTTCGCGAACAACTGGAACAAGCCGA < 2:27034/143‑1 AGGCGTAATACCACAACCCTTAAGTTAGCGCTGATGGGCGCAGGCCCCACTTTTTGGAGAAATTGTATGATGTACCACATTCCCGGCGTGTTATCGCCACAGGACGTCGCCCGTTTTCGCGAACAACTGGAACAAGCCGAATG > 1:75246/1‑143 cgtgCCACAGCCCTTAAGTTCGCGCTTATGGGCGCAGGCCCCACTTTTTGGAGAAATTGTATGATGTACCACATTCCCGGCGTGTTAGCGCCACAGGACGTCGCTCGTTTTCGCGAACAACTGGAACAAGCCGAATGGGTGGA < 1:258796/139‑1 CCTTAAGGTAGCGCTTAGGTGCGCAGGCCCCACTTTTTGGAGAAATTGTATGATGTACCACATTCCCGGCGTGTTATCGCCACAGGACGTCGCTCGTTTTCGCGAACAACTGGAACAAGCCGAATGGGTGGATGGACGCGTCA < 2:163577/143‑1 TTAGCGCTTATGGGCGCAGGCCCCACTTTTTGGAGAAATTGTATGATGTACCACATTCCCGGCGTGAGAACGCCACAGGACGTCGCTCGTTTTGGCGAACAACTGGCACCACCCGAAGGGGGGGATGGACGCGTCACCACCGG > 2:190758/1‑143 GCGCAGGCCCCACTTTTTGGAGAAATTGTATGATGTACCACATTCCCGGCGTGTTATCGCCACAGGACGTCGCTCGTTTTCGCGAACAACTGGAACAAGCCGAATGGGTGGATGGACGCGTCACCACCGGCGCACAAGGTGCG > 2:216686/1‑143 CCCGGCATTACGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/608151‑608008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggCGCAGGCCCCACTTTTTGGAGAAATTGTATGATGTACCACATTCCCGGCGTGTTATCGCCACAGGACGTCGCTCGTTTTCGCGAACAACTGGAACAAGCCGAATGGGTGGATGGACGCGTCACCACCGGCGCACAAGGTGCG < NC_000913/839235‑839094 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |