New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	608008 =	NA (NA)	22 (1.380)	19/258	NT	61.1%	noncoding (2/1345 nt)	IS186	repeat region
	?	NC_000913	= 839235	14 (0.880)					intergenic (‑28/+14)	ybiX/fiu	PKHD‑type hydroxylase YbiX/putative iron siderophore outer membrane transporter

ATAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATA  >  NC_000913/607866‑608131                                                                                                                                               |                                                                                                                            aTAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATc                                                                                                                             >  1:40527/1‑143 (MQ=255)  tAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATCGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCCGGGAGTACTcc                                                                                                                            >  2:87705/1‑143 (MQ=255)        tgtgTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGCGCGGGGAGTAATCCCATAAg                                                                                                                      >  1:308745/1‑143 (MQ=255)         gtgatgaaCGGTGCCGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAgc                                                                                                                     <  1:1827/137‑1 (MQ=255)                     gCTGGTATGTACGCTTCTGGCCGGACACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCCGTTCTCGCTTACGAACCGACGAAGTAGACGTTGTGCGGTGAGTAATCCCATAAGCGCTAACTTAAgg                                                                                                         <  1:143321/143‑1 (MQ=255)                       tGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAATAGCCGGGGTGCGGGGAGGAAGCCCATGAGCGCTAACTTGAGGGt                                                                                                       >  1:115054/1‑143 (MQ=255)                        gggATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTACGGGtt                                                                                                      >  1:190375/1‑143 (MQ=255)                           aTTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGgtggtg                                                                                                   >  1:97716/1‑143 (MQ=255)                                cGCTTCGGGTGGGAGACTCGCTGTGTGAGTTGACGGGGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTAtt                                                                                              <  2:272045/143‑1 (MQ=255)                                         tCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTAACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATACGCGCTAACTTAAGGGCTGTGGTAGTACGCCTggt                                                                                     >  1:202251/1‑141 (MQ=255)                                                   gCTTTGTGGGTTTACGGTGAAGGAACGGAATATTGAGGTTAAGGCTGGTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAAc                                                                           <  1:106904/143‑1 (MQ=37)                                                                                    tGAGGTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCa                                          <  1:194559/143‑1 (MQ=255)                                                                                         ttAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGGGGTATTATGCCTGATATGATTTAACGTGCAGATGAATCAAAATCACGATAACTGGTCAGGAAt                                     >  2:50083/1‑143 (MQ=21)                                                                                                                  gaagaaGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAGTTACTCTCACGATAACTGGTCAGCAATGCTGGCCCATATTGGTAAGCCCgaa            >  1:25442/1‑143 (MQ=255)                                                                                                                          aGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAGCTTAAGGTTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGa    <  1:133041/143‑1 (MQ=255)                                                                                                                            ccGTTGTGCGGGGAGTAATCCCATACGCGCTAACTTAAGCGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATa  <  2:220239/143‑1 (MQ=255)                                                                                                                                               |                                                                                                                            ATAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATA  >  NC_000913/607866‑608131

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.