New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2729630 =	NA (NA)	9 (0.170)	8/254	NT	NA	noncoding (1528/1542 nt)	rrsG	16S ribosomal RNA
	?	NC_000913	2729652 =	NA (NA)					noncoding (1506/1542 nt)	rrsG	16S ribosomal RNA

GAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAA  >  NC_000913/2729511‑2729708                                                                                                                                              |                                                         gAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAACGTACGCTTCTTTGAGGTAAGGTGGTTGTCCAACCGCAGGTTGCCCTACGGTTAc                                                         >  1:52630/1‑143 (MQ=14)   aCGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCt                                                       >  1:601697/1‑143 (MQ=255)    cGGCCTGATTCTCTTCAGCCTCACGCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCtt                                                      <  1:232152/143‑1 (MQ=255)        cttagcctctTCGGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTGCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTa                                                  <  2:683596/137‑1 (MQ=255)         ttATTCTCTTCAGACTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTAc                                                 <  1:586540/143‑1 (MQ=255)         gtATTCTCTGCAGCCGCACTCCCAACGCGGAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCGTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTAc                                                 <  1:478921/142‑1 (MQ=255)          tATTCTCTTCAGCCTCACTCCCACCGCGGATTCAGCACGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACg                                                >  2:590315/1‑143 (MQ=14)           aTTCTCGTCAGCCGCGCTCCCAACGCGTAAGCGCCTTGCTATTCACTTTGCATCAGACAGTCTGTGTGGGCACTGCGAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGa                                               <  2:187419/143‑1 (MQ=11)            ttCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTATGAGCACTGCAAAGTACGCTTCTTTAAGGTACGGCGGGGATCCAACCGCCGGTTCCCCTCCCGGTACCCTCTTACgcc                                              >  2:789253/1‑141 (MQ=14)             tctcTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGGCAATCTGTGTGAGCACTGCATAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCGGGTTCCCCTACGGTTACCTTGTTACGACt                                             >  1:348917/1‑143 (MQ=255)              ctctTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTATGCGCCCTGCACAGTACGCTTCTTTAAGATAAAGAGGGGATCCAACCGCAGGTTCCCCTACGGCTCCCTTGTTACGACtt                                            >  1:957466/1‑143 (MQ=14)               tctTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTCCCTTGTTACGACTTc                                           >  2:1020390/1‑143 (MQ=255)                ctTCAGCTTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGGGCAACGCAGTGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCa                                          <  2:377078/143‑1 (MQ=14)                 ttCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCAc                                         >  1:1034645/1‑143 (MQ=40)                  tCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCCGACAATCTGTGTGCGCACTGCACCGTACGCTTCTTTCAGGTAAGAAGGTGATCCAACCGCAGGTTTCCATAAGAATACATTGTTACGACTTCAcc                                        >  1:551493/1‑143 (MQ=14)                   agcccgcACTGCCAACGCGTAGGCGCCTTGCTATTCACTCTTCATCAGACAAGCTGTGTGAGCACGGCAAAGTACGCGTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCAccc                                       <  2:743556/137‑1 (MQ=14)                      ccTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGATCCCCTACGGTTACCTTGTTACGACTTCACCCCAg                                    >  2:685432/1‑143 (MQ=255)                       cTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACTCCAGt                                   >  2:280257/1‑143 (MQ=255)                             cccAACGCGTCAACGCCTTGCTATTCCCTTTTCATCCCACAATCTGTGTGCGCACTGCAAAGTACGCTTCTTGAACGCAAGGATGTGATCCACCCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGaa                             <  1:519484/143‑1 (MQ=14)                             cccAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGaa                             <  2:1065853/143‑1 (MQ=255)                                 aCGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACTTTGTTACGACTTCACCCCAGTCCTGAATcac                         >  2:576357/1‑143 (MQ=255)                                   gcgTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACaa                       <  1:459397/143‑1 (MQ=40)                                    cgTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACaaa                      <  2:601697/143‑1 (MQ=40)                                      tAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGt                    <  1:530332/143‑1 (MQ=255)                                       taaCGCCTTGCTATTCGCTTTTCATCTGACAATCGGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTCATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTg                   <  2:108468/142‑1 (MQ=255)                                       caaCGCCTTGCTATTCACTTTTCATCAGCCAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTg                   <  1:636019/142‑1 (MQ=255)                                       caaCGCCTTGCTATTCACCTTTCATCAGACAATCGGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTg                   <  1:68282/142‑1 (MQ=255)                                       aaaCGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTg                   <  2:1054837/143‑1 (MQ=39)                                       aaaCGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAAATTCACCTACAGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTg                   >  1:309754/1‑143 (MQ=255)                                        aaCGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGAgg                  >  1:31676/1‑143 (MQ=255)                                             cTTGCTGTTCACTTTTCATCAGACAATCTGTGTGAGCAATGCAAAGTACGCTTCTTGAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAgc             <  2:780523/143‑1 (MQ=255)                                               tGCTATTCTCTTTTCATCTGACCATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAgcgc           <  2:826575/143‑1 (MQ=255)                                               tGCTATTCACTTTTCCTCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAgcgc           <  2:907766/143‑1 (MQ=38)                                               tGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTTCTAAgcgc           >  1:273977/1‑143 (MQ=255)                                                gCTATTCACTTTTCATCCGACATTCTGTGTTAGCACTGCAAAGTACGCTTCTTTAAGGTAAGTAGGTGATCCAACCGCAGGTTCCCCGACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTTGTAAGCGcc          <  2:882242/143‑1 (MQ=11)                                                   aTTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTc       >  2:323180/1‑143 (MQ=34)                                                     tCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCATGCTAAGACTTCACCCCAGTCATGAATCACAACGTGGTAAGCGCCCTccc     >  2:755888/1‑143 (MQ=255)                                                      cACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCg    >  1:756889/1‑143 (MQ=32)                                                      cACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCg    >  1:513594/1‑143 (MQ=32)                                                       aCTTTTCATAAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTACGGTAAGGAGGTGATCCCACCACAGGTTCCACTACGGTTAACTCGGTACGACTTCACGCCAGTCGTAAATACCAAAGTGCTGAGCCCCCTCCCGa   >  2:639759/1‑143 (MQ=11)                                                        cTTTTCATCAGTCGATCTGGTTGAGCACTGCATAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGaa  <  2:44694/143‑1 (MQ=11)                                                                                                                                              |                                                         GAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAA  >  NC_000913/2729511‑2729708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.