New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 2105826 = | 14 (0.940) | 3 (0.210) | 3/252 | NT | 20.4% | coding (232/993 nt) | wbbI | beta‑1,6‑galactofuranosyltransferase |
? | NC_000913 | 2105842 = | 10 (0.700) | coding (216/993 nt) | wbbI | beta‑1,6‑galactofuranosyltransferase |
AAAACATTTCTGTTGTTAACATTCCTCTATGGGGTGGAGTAGTCCAGAGAATTATTAGTTCTGTTAAGCTTAGTACATTTCTCTGCGGTCTTGAAAATAAAGATGTTTTAATTTTCAATTTCCCGATGGCCAAACCATTTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2105969‑2105826 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttggcCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTCCACCCCATAGAGGAATGTTAACAACAGAAA > NC_000913/2105842‑2105963 AAAACATTTCTGTTGTTAACATTCCTCTATGGGGTGAAGTAGTCCAGAGAATTATTAGTTCTGTTAAGCTTAGTACATTTCTCTGCGGTCTTGAAAATAAAGATGTTTTAATTTTCAATTTCCCGATGTCCACACCATCTTGG > 2:164695/1‑143 TCTTGAAAATAAAGATGTTTTAATTTTCAATTTCCCGATGACCAAACCATTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCACAGAGAAAAATACTAAGCTCAACAGAAATAAAAATTCTATGGAC > 2:261472/1‑143 AATTTTCAATTTCCCGATGGCCAAACCATTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTCCACCCCATAGAGGAAT < 1:261472/143‑1 CGATGGCCAAACCATTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTCCACCCCATAGAGGACTGTTAACAACAcata > 2:259736/1‑139 AAAACATTTCTGTTGTTAACATTCCTCTATGGGGTGGAGTAGTCCAGAGAATTATTAGTTCTGTTAAGCTTAGTACATTTCTCTGCGGTCTTGAAAATAAAGATGTTTTAATTTTCAATTTCCCGATGGCCAAACCATTTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2105969‑2105826 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttggcCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTCCACCCCATAGAGGAATGTTAACAACAGAAA > NC_000913/2105842‑2105963 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |