New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2105826 =14 (0.940)3 (0.210) 3/252 NT 20.4% coding (232/993 nt) wbbI beta‑1,6‑galactofuranosyltransferase
?NC_000913 2105842 = 10 (0.700)coding (216/993 nt) wbbI beta‑1,6‑galactofuranosyltransferase

TGACCATATCACAGGTAGCAAGCCGCACAGAATCACTACCCCCTCCTCCTCTTAATTCATCAATATCATGAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTCCACCCCATAGAGGAATGTTAACAACAGAAATGTTTT  >  NC_000913/2105703‑2105969
                                                                                                                                           |                                                                                                                               
tGACCATATCACAGGTAGCAAGCCGCACAGATTTACTTCCCCCTCCTTCTCTTAATTCATCAATATCATGAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATc                                                                                                                              <  1:231072/143‑1 (MQ=255)
 tatgtgttgttaacagtcctctatggggtggagtagtccagagaattattagttctgttaagcttagtacatttctctgcggtcttgaaaataaagatgttttaattttcaatttcccgatgGCCAAAATGGTTTGGCCATCg                                                                                                                             >  2:259736‑M1/123‑143 (MQ=255)
               attcctctatggggtggagtagtccagagaattattagttctgttaagcttagtacatttctctgcggtcttgaaaataaagatgttttaattttcaatttcccgatgGCCAAAATGGTTTGGCCATCGGGAAATTGAAAAtt                                                                                                               <  1:261472‑M1/35‑1 (MQ=255)
                   aaGCCGCACAGAATCACTACCCCCTCCTCCTCTTAATTCATCAATATCATGAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTaaaa                                                                                                           >  2:224309/1‑143 (MQ=255)
                       cGCACAGAATCACTACCCCCTCCTCCTCTTAATTCGTCAATACCACGACGCAGAGGTACGATTCTAAAGTTTAGAAGGCGGTGAGGCAACGACAAGATATGCCAAACTGCTTTGGACAACGGGAAAATGAAAAATAAAACaac                                                                                                       >  1:50649/1‑141 (MQ=255)
                                    tACCCCCTCCTCCTCTTAATTCATCAATATCATGAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCAATCGGGAAATTGAAAATTAAAACATCTTTATTTTCaaaa                                                                                          >  2:150086/1‑141 (MQ=255)
                                    gtccatagaatttttatttctgttgagcttagtatttttctctgtggtcttgaaaataaagatgttttaattttcaatttcccgatgGCCAAAATGGTTTGGTCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGa                                                                                          >  2:261472‑M1/88‑143 (MQ=255)
                                                          atcaATATCATGAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAAGTAAAACATCTTTATTTTCAAGACCGCAGAGCAATGTACTAAGCt                                                                    >  1:58023/1‑143 (MQ=255)
                                                           tcaATATCATGAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCtt                                                                   <  1:254947/143‑1 (MQ=255)
                                                                  cATGAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGaa                                                            >  1:289600/1‑143 (MQ=255)
                                                                     gAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACAAAGCTTAACAGAAcaa                                                         >  1:45613/1‑141 (MQ=255)
                                                                                   tcttgaaaataaagatgttttaattttcaatttcccgatgaccaaaccattttggcCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCACAGAGAAAAATACTAAGCTCAACAGAAATAAAAATTCTATGGac                                           >  2:261472‑M2/57‑143 (MQ=255)
                                                                                                gAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTGCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTCCACCCCAt                              <  2:144504/143‑1 (MQ=255)
                                                                                                 aaGGCGGTGAAAGAATCACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTCCACCCCATa                             <  1:137261/143‑1 (MQ=255)
                                                                                                        aattttcaatttcccgatggccaaaccattttggcCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTCCACCCCATAGAGGAAt                      <  1:261472‑M2/108‑1 (MQ=255)
                                                                                                            aGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAAAAGAACTAATAATTCTCTGGACTACTACACCCCATAGAGGAATGATa                  >  2:80167/1‑143 (MQ=255)
                                                                                                                      cgatggccaaaccattttggcCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTCCACCCCATAGAGGACTgttaacaacacata        >  2:259736‑M2/22‑139 (MQ=255)
                                                                                                                            CCAAGATGGTGTGGACATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTTCACCCCATAGAGGAATGTTAACAACAGAAATGtttt  >  2:164695‑M1/1‑143 (MQ=255)
                                                                                                                                           |                                                                                                                               
TGACCATATCACAGGTAGCAAGCCGCACAGAATCACTACCCCCTCCTCCTCTTAATTCATCAATATCATGAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTCCACCCCATAGAGGAATGTTAACAACAGAAATGTTTT  >  NC_000913/2105703‑2105969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.