New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 2105826 = | 14 (0.940) | 3 (0.210) | 3/252 | NT | 20.4% | coding (232/993 nt) | wbbI | beta‑1,6‑galactofuranosyltransferase |
? | NC_000913 | 2105842 = | 10 (0.700) | coding (216/993 nt) | wbbI | beta‑1,6‑galactofuranosyltransferase |
TGACCATATCACAGGTAGCAAGCCGCACAGAATCACTACCCCCTCCTCCTCTTAATTCATCAATATCATGAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTCCACCCCATAGAGGAATGTTAACAACAGAAATGTTTT > NC_000913/2105703‑2105969 | tGACCATATCACAGGTAGCAAGCCGCACAGATTTACTTCCCCCTCCTTCTCTTAATTCATCAATATCATGAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATc < 1:231072/143‑1 (MQ=255) tatgtgttgttaacagtcctctatggggtggagtagtccagagaattattagttctgttaagcttagtacatttctctgcggtcttgaaaataaagatgttttaattttcaatttcccgatgGCCAAAATGGTTTGGCCATCg > 2:259736‑M1/123‑143 (MQ=255) attcctctatggggtggagtagtccagagaattattagttctgttaagcttagtacatttctctgcggtcttgaaaataaagatgttttaattttcaatttcccgatgGCCAAAATGGTTTGGCCATCGGGAAATTGAAAAtt < 1:261472‑M1/35‑1 (MQ=255) aaGCCGCACAGAATCACTACCCCCTCCTCCTCTTAATTCATCAATATCATGAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTaaaa > 2:224309/1‑143 (MQ=255) cGCACAGAATCACTACCCCCTCCTCCTCTTAATTCGTCAATACCACGACGCAGAGGTACGATTCTAAAGTTTAGAAGGCGGTGAGGCAACGACAAGATATGCCAAACTGCTTTGGACAACGGGAAAATGAAAAATAAAACaac > 1:50649/1‑141 (MQ=255) tACCCCCTCCTCCTCTTAATTCATCAATATCATGAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCAATCGGGAAATTGAAAATTAAAACATCTTTATTTTCaaaa > 2:150086/1‑141 (MQ=255) gtccatagaatttttatttctgttgagcttagtatttttctctgtggtcttgaaaataaagatgttttaattttcaatttcccgatgGCCAAAATGGTTTGGTCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGa > 2:261472‑M1/88‑143 (MQ=255) atcaATATCATGAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAAGTAAAACATCTTTATTTTCAAGACCGCAGAGCAATGTACTAAGCt > 1:58023/1‑143 (MQ=255) tcaATATCATGAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCtt < 1:254947/143‑1 (MQ=255) cATGAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGaa > 1:289600/1‑143 (MQ=255) gAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACAAAGCTTAACAGAAcaa > 1:45613/1‑141 (MQ=255) tcttgaaaataaagatgttttaattttcaatttcccgatgaccaaaccattttggcCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCACAGAGAAAAATACTAAGCTCAACAGAAATAAAAATTCTATGGac > 2:261472‑M2/57‑143 (MQ=255) gAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTGCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTCCACCCCAt < 2:144504/143‑1 (MQ=255) aaGGCGGTGAAAGAATCACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTCCACCCCATa < 1:137261/143‑1 (MQ=255) aattttcaatttcccgatggccaaaccattttggcCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTCCACCCCATAGAGGAAt < 1:261472‑M2/108‑1 (MQ=255) aGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAAAAGAACTAATAATTCTCTGGACTACTACACCCCATAGAGGAATGATa > 2:80167/1‑143 (MQ=255) cgatggccaaaccattttggcCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTCCACCCCATAGAGGACTgttaacaacacata > 2:259736‑M2/22‑139 (MQ=255) CCAAGATGGTGTGGACATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTTCACCCCATAGAGGAATGTTAACAACAGAAATGtttt > 2:164695‑M1/1‑143 (MQ=255) | TGACCATATCACAGGTAGCAAGCCGCACAGAATCACTACCCCCTCCTCCTCTTAATTCATCAATATCATGAATCAGAGGTACTATTCTAAATTTTAGAAGGCGGTGAAAGAATGACAATATATGCCAAAATGGTTTGGCCATCGGGAAATTGAAAATTAAAACATCTTTATTTTCAAGACCGCAGAGAAATGTACTAAGCTTAACAGAACTAATAATTCTCTGGACTACTCCACCCCATAGAGGAATGTTAACAACAGAAATGTTTT > NC_000913/2105703‑2105969 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |