Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1209574	1209634	61	24 [23]	[23] 24	stfE	e14 prophage; putative side tail fiber protein fragment

ATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAA  >  NC_000913/1209431‑1209712                                                                                                                                               |                                                                                                                                            gtCCCAGACCCGAATAAACGCACGTCGTAATTCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTGCCGGGTATGCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACg                                                                                                                                             <  2:162328/142‑1 (MQ=255)    ccAGCCCCGAATAAACTGACCACGTAAATCAGGCAATTTATTTGTCGGAGAAGGCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCCGCCTGTTGGCGGAGTGGCTGAAGGCCACGGaa                                                                                                                                          <  1:307267/143‑1 (MQ=255)           cGAATAATCTCACCTCGTAAATCGGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAGAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGac                                                                                                                                   <  2:854980/143‑1 (MQ=255)             aaTAAACTCACCACGTAAATCAGGCAATTTAGTTGTCGGAGAAGCCTTTGCCAGTTCCGGGTATTCTTAAGCAATCAGAGCCTCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGGGGCTGAAGGCCACGGAACCGGGacac                                                                                                                                 <  2:451213/143‑1 (MQ=255)                acaCTCACCACGTAAACCACGCACTTTATTTGTCGGATAAGCCTTTGCCAGGTCCGAGTCTTCTTTAACCTATAAAGCGGCACCATTGCCTTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCaa                                                                                                                              <  1:576656/141‑1 (MQ=255)                    tCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAgg                                                                                                                          >  1:101194/1‑143 (MQ=255)                         ccGTAAAGCGGGCGATTTATGTGGCGGAGAGGGCTGTGCCGGTTCCGGGTATGCTGCAGCAGAAAAAGCGGCACCCTTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATg                                                                                                                     <  2:787250/142‑1 (MQ=255)                                      gtgttgtttGTCGGATAAGCCGTTGCCAGTTCCGGGTAGTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAACCCGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTcc                                                                                                        <  2:1001742/137‑1 (MQ=255)                                      catttatttcTCGGATCAGCCTTTGCCAGTGCCTGGTATCCTTCAGCAGACAAAGTCGCCCCATTGCATCTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACCGAACCGGGACACCAACAGGTAATGCAGAGccttctcc                                                                                                        >  2:397343‑M2/2‑135 (MQ=255)                                      aaTTTCTTTGTCGCTTAACCCGTTGCCAGTTCCGGGTAGTCTTCAGCAGAAAAAGCGGCACCATGGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcc                                                                                                        >  2:437450‑M2/1‑135 (MQ=255)                                      aaTTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAGAAAGCGGCACCATGGCATTTCAGCCAGCCTGTCTGCGGAGTGGCTGAAGGCCACGGCACCGGGACACCAACAGGTAATGCAGAGccttctcc                                                                                                        >  2:240468‑M2/1‑135 (MQ=255)                                             ttGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaacca                                                                                                 >  1:534072‑M2/1‑128 (MQ=255)                                             ttGTCGGATAAGCCTGTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaacca                                                                                                 >  2:413171‑M2/1‑128 (MQ=255)                                                                cAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACCCCAACAGGTAATGCAGAGcctccccccacaccaaggtttccgcgcgccgtct                                                                              <  2:192549‑M2/143‑35 (MQ=255)                                                                   ttCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaacaaaggttttcgagagccgtttgca                                                                           <  1:874444‑M2/143‑38 (MQ=255)                                                                           aTGCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgcca                                                                   >  1:1060940‑M2/1‑98 (MQ=255)                                                                               ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGCTGGCGGAGTCGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAAccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccg                                                               <  1:47981‑M2/143‑50 (MQ=255)                                                                                  agcagAAAAAGCGGCACCAGTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCGACGGCACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatt                                                            >  2:72829‑M2/1‑91 (MQ=255)                                                                                     agAACAAGCGGCACCATTGCATTTCAGCCAGGCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttga                                                         >  2:805028‑M2/1‑88 (MQ=255)                                                                                                                ccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggctta                              >  1:478366‑M2/1‑61 (MQ=255)                                                                                                                   gccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaagcggattcttgcggcttaaca                           <  1:678655‑M2/143‑86 (MQ=255)                                                                                                                            cGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgacctgatatcgccaaacggatgctcgcggcctaacagcaccgcgc                  <  2:1117790‑M2/143‑95 (MQ=255)                                                                                                                                          gCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacggcagcgcgcgaagtgcggtaagt    <  1:82920‑M2/143‑109 (MQ=255)                                                                                                                                            cACGGAACGGGGACACCGGCGGGTAATGCAGAGccttctcccattccaaggttttcgagagccgtgtgtacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaa  >  1:192549‑M2/1‑33 (MQ=255)                                                                                                                                               |                                                                                                                                            ATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAA  >  NC_000913/1209431‑1209712

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑