Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1209574	1209634	61	24 [23]	[23] 24	stfE	e14 prophage; putative side tail fiber protein fragment

CGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTT  >  NC_000913/1209500‑1209777                                                                                                                                        |                                                                                                                                               cccccactgattgattactgattgctcaattctaccattcataaccggtatagctatgaaacctgtgcgtcctaatgtagccgttgctgcattgagttttgcttcttttcccaaaccaaCGTTTATTAAAATGAAGAAATAAc                                                                                                                                         <  2:120923‑M2/24‑1 (MQ=255)        cgaatcattaccgattgctcaataccacccatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagtgttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCaaa                                                                                                                                  <  1:191179‑M2/31‑1 (MQ=255)         gaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAt                                                                                                                                 <  1:498200‑M2/32‑1 (MQ=255)              attactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                                                                                                            >  2:362376‑M2/107‑143 (MQ=255)                             ataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAc                                                                                                             <  1:372953‑M2/52‑1 (MQ=255)                              taccccccatcatcaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAcc                                                                                                            <  1:556040‑M2/53‑1 (MQ=255)                                   ccattcataaccggtatagctatgaaaccggtgcgttctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgggg                                                                                                       <  2:586390‑M2/58‑1 (MQ=255)                                           aacccgtatagctatgcacccggtgcgtcctcatgtcgccgttgctgcattgagttttgcgccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                                                                               <  2:673727‑M2/66‑1 (MQ=255)                                            accggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                                              <  1:443491‑M2/67‑1 (MQ=255)                                            accggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                                              >  1:668142‑M2/77‑143 (MQ=255)                                            accggtatagcgatgcaaccggtgcgtccgaatgtagccgttgctgcattgagtgttgctcctgctcccaaaccacCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCACTCCTGCTTTTACCAGGGGGATTTAACa                                                                                              <  2:244508‑M2/67‑1 (MQ=255)                                                 tatagctatgacaccggtgcgtcctaatgtagccgttgctgcattgagtgttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCtt                                                                                         <  1:943239‑M2/72‑1 (MQ=255)                                                       tatgaaaccggtgcgtcttaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                                                                                   <  2:656970‑M2/78‑1 (MQ=255)                                                       tatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTGTTACCAGGGGGATTTAACATGCATATTGGc                                                                                   >  1:202357‑M2/66‑143 (MQ=255)                                                                 gtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgcg                                                                         <  2:115045‑M2/88‑1 (MQ=255)                                                                       cctaatgtagccgttgctgcattgagttttgctccttctcccaaacccaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGCGGGCTTTAACATACTTATTGGCTATGTacccgtcggac                                                                   >  2:978091‑M2/50‑138 (MQ=255)                                                                            tctagacgttgctgcattgagtttttctccttccccgagaccacCGTTTATGAAAATGAAGAAATAACCAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt                                                              <  2:503306‑M2/99‑1 (MQ=255)                                                                              tagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGa                                                            <  1:208612‑M2/101‑1 (MQ=255)                                                                                        tgcagtgagttgtcttccttcccccgacccacCGTTTATGCAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAAcaca                                                  <  1:382156‑M2/111‑1 (MQ=255)                                                                                          cattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAAGACCAGAACAAAGa                                                >  2:955714‑M2/31‑143 (MQ=255)                                                                                                                  aaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACtg                        >  2:853996‑M2/7‑143 (MQ=255)                                                                                                                    ccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACtgtg                      >  1:989550‑M2/5‑143 (MQ=255)                                                                                                                     caaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGc                     >  1:407082‑M2/4‑143 (MQ=255)                                                                                                                                        gaaATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGAtcttt  >  1:654891/1‑143 (MQ=255)                                                                                                                                        |                                                                                                                                               CGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTT  >  NC_000913/1209500‑1209777

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑