New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 899775	NA (NA)	4 (0.100)	4/250	NT	NA	noncoding (20/29 nt)	other	REPv82b
	?	NC_000913	= 899786	NA (NA)					noncoding (9/29 nt)	other	REPv82b

GTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCA  >  NC_000913/899634‑899917                                                                                                                                              |                                                                                                                                               gTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATa                                                                                                                                               >  1:265642/1‑143 (MQ=255)  tGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATaa                                                                                                                                              >  1:577999/1‑143 (MQ=255)   gAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAg                                                                                                                                             >  2:650877/1‑143 (MQ=255)      gCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCgc                                                                                                                                          >  1:573172/1‑142 (MQ=255)       cAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTa                                                                                                                                         >  1:534516/1‑143 (MQ=255)            aaaaaGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCa                                                                                                                                    <  1:104938‑M2/143‑2 (MQ=255)             tgaagcCGCACATGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCat                                                                                                                                   <  2:785478‑M2/141‑3 (MQ=255)             aaaaGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCat                                                                                                                                   <  1:364384‑M2/143‑3 (MQ=255)                 gCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATgcgctacgcttatcagg                                                                                                                               <  1:247679‑M1/143‑18 (MQ=255)                     cATGGGCGGCTTCAGATTGCTGACAAAGGGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAAt                                                                                                                           <  2:425361/143‑1 (MQ=255)                        gtgCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATgcgctacgcttatcaggcctacat                                                                                                                        <  1:564750‑M1/143‑25 (MQ=255)                          gCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTAc                                                                                                                      <  1:379287/143‑1 (MQ=255)                           cGGATTAAGATAGCTGACAAAGTGCGCGGTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTAcc                                                                                                                     <  1:232863/143‑1 (MQ=255)                              cTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCttt                                                                                                                  <  1:541527/143‑1 (MQ=255)                               tgcAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTg                                                                                                                 <  2:125619/141‑1 (MQ=255)                                    aTTGCTGACAAAGGGCGCGTTGGTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGtcatc                                                                                                            <  1:237011/143‑1 (MQ=255)                                     ttGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTCAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATgcgctacgcttatcaggcctacatggcccatgcaatg                                                                                                           <  1:714705‑M1/143‑38 (MQ=255)                                        cTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGtc                                                                                                        >  1:487328/1‑143 (MQ=255)                                        cTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCGACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATgcgctacgcttatcaggcctacatggcccatgcaatgtat                                                                                                        <  1:75763‑M1/143‑41 (MQ=255)                                         tGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATGAGCGTAGCGCATCAGGCAACTTTACCCTTGTCCTCAGtct                                                                                                       >  2:16479/1‑143 (MQ=255)                                         tGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGtct                                                                                                       >  1:567910/1‑143 (MQ=255)                                         tGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATACGGCCTACAAAAGCGTGCAAATTCAATAGATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGtct                                                                                                       >  2:428566/1‑143 (MQ=255)                                           aCAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTGGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCa                                                                                                     >  1:164039/1‑143 (MQ=255)                                             aaaGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACACAAGCGTGCAAATTCACTCCATTGCATGGGCCATGTAGGCCTGATCAGCGTGGCGCATCAGGCAACTTTGCCTTTGTCCTCAGCCTCGAg                                                                                                   >  2:482363/1‑143 (MQ=17)                                             aaaGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATAGATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAAGATTACCTTTGTCATCGGTCGCacg                                                                                                   >  1:100563/1‑141 (MQ=18)                                                 tGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCcgc                                                                                               <  1:293502/143‑1 (MQ=255)                                                               gCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTGAAGCCGCGGTTGCGGCTTTCt                                                                                 >  2:810477/1‑143 (MQ=255)                                                               gCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCt                                                                                 >  2:488224/1‑143 (MQ=255)                                                                     tgtgtcgTAAGCGCATGATCCGGCCTTCAAAATCGTGCAAATTCAATACCTTGCCTGGTTCATGTAGGCCTGATAAGCGTAGTGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCt                                                                           <  2:265465/138‑1 (MQ=21)                                                                     tGCGGCGTAAACGCCGTATCCGGCCTACAAAAGCGTGCACATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCt                                                                           <  2:816151/143‑1 (MQ=255)                                                                       cggcgTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTa                                                                         <  1:775288/143‑1 (MQ=255)                                                                        ggcgTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTAc                                                                        >  1:636954/1‑143 (MQ=255)                                                                         gcgTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACt                                                                       >  1:525083/1‑143 (MQ=255)                                                                         gcgTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACt                                                                       >  1:477472/1‑143 (MQ=255)                                                                           gTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGCATCTTACtgc                                                                     >  2:687218/1‑142 (MQ=255)                                                                           gTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACtgt                                                                     <  1:207270/143‑1 (MQ=255)                                                                            cacgcggcTTGTCCGGCCTACAAATGCGTGCAAATTCAAGACATTGCAGGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACtgtg                                                                    <  1:83913/136‑1 (MQ=21)                                                                              aaCGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTggg                                                                  >  1:224796/1‑143 (MQ=255)                                                                                      aTCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTg                                                          >  1:734722/1‑143 (MQ=255)                                                                                          ggCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCa                                                      >  2:226560/1‑143 (MQ=255)                                                                                          ggCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCAATGCTCa                                                      >  2:362488/1‑143 (MQ=255)                                                                                          ggCCTACAAAAGCGTGCAAATTCAATACATTGAATGGGCCATGTAGGCCTGATAAGCGTAGCGCATAAGGCAATTTTACATTTGTCATCAGTCTCAAGCCGCGGTTGCGGATTACTGAATATAACTGTGGGAACCACTAGTCa                                                      >  2:237478/1‑143 (MQ=25)                                                                                           gCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCAc                                                     <  2:645811/143‑1 (MQ=255)                                                                                            ccTACAAAAGCTGGCAAATTCAATACACTGCGTGGGCCATGTAGGCCTGATAAGCTTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACt                                                    <  2:629851/143‑1 (MQ=39)                                                                                            acTACAAAAGCGTGCAAATTCAATACATTGTATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACt                                                    <  1:26728/142‑1 (MQ=255)                                                                                                       gTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCCCTGGTCGCTGCTTTTTTgtt                                         >  1:219832/1‑141 (MQ=255)                                                                                                           aaaTTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGCCACTGATTTTTTGATCAGt                                     >  1:684269/1‑143 (MQ=255)                                                                                                           aaaTTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAAGTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCAGTGGTCACTGATTTTTTGATAAGt                                     >  1:305443/1‑143 (MQ=255)                                                                                                               tCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCg                                 >  1:499311/1‑143 (MQ=255)                                                                                                               tCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGGCACTGATTTTTTGGTAAGTAcgg                                 >  1:715490/1‑141 (MQ=255)                                                                                                                  aTACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtcggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcag                              <  1:75763‑M2/143‑104 (MQ=255)                                                                                                                  aTACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGGTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTGTTTGATAAGTACCGTCa                              >  2:296937/1‑143 (MQ=255)                                                                                                                    gcATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGc                            <  2:581203/142‑1 (MQ=255)                                                                                                                     cATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgttgacgccgcatccggcataaacaacgcgcactttgtcagcaa                           <  1:714705‑M2/143‑107 (MQ=255)                                                                                                                      aTTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTAATCAGTCTCCAGCCGCGGTTGCGGCTGTCTGACTCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTCCCGTCGGCtt                          >  2:473304/1‑143 (MQ=38)                                                                                                                           aTGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCACGCCGCGACTGCGGCTGTGTGCATCTTACTGTGGGAACCACTGCACACTGATTTTTTGATAAGTTCTGTCAGCTTGAAtg                     >  1:137285/1‑142 (MQ=25)                                                                                                                           aTGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAAtt                     >  1:549955/1‑143 (MQ=255)                                                                                                                              ggCCATGTAGGCCTGATAAGCGTAGCGTATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCCCTGATTTTTTGATAAGTACCGTCAGCTTTAATtgct                  <  1:805862/143‑1 (MQ=255)                                                                                                                              ggCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATtgct                  <  2:534516/143‑1 (MQ=255)                                                                                                                              ggCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATtgct                  <  2:104938/143‑1 (MQ=255)                                                                                                                               gCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTAACTTTGTCATCAGTCTCAAGCCGCGGATACGGCTTTCTGAATCTTACTGTGGGAAACACTGGTCACTGATCTTTTGAATCGTAACATCCCCTTTAATtggtg                 >  2:74014/1‑143 (MQ=25)                                                                                                                                  aTGTAGGCCTGATAAGCGTAGCGCatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcagcaatctgaagccgcac              <  1:564750‑M2/143‑120 (MQ=255)                                                                                                                                    gTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAgc            <  1:438909/143‑1 (MQ=255)                                                                                                                                      aGGCCGGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAgcgc          <  2:786629/143‑1 (MQ=255)                                                                                                                                         ccTGATAAGCGTAGCGCatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcagcaatctgaagccgcacatgcggc       <  1:247679‑M2/143‑127 (MQ=255)                                                                                                                                         ccTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGtt       <  1:428566/143‑1 (MQ=255)                                                                                                                                         ccTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGtt       <  2:636954/143‑1 (MQ=255)                                                                                                                                         ccTGATAAGCGCAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGtt       <  1:16479/143‑1 (MQ=255)                                                                                                                                             gtAAGGGGAGCGCATCGGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTGTCTGAATCTTACTGTGGGAGCCACTGGTTACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTc   <  2:396763/142‑1 (MQ=255)                                                                                                                                             aTgcgctacgcttatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcagcaatctgaagccgcatgtgcggcttca   <  2:785478‑M1/143‑142 (MQ=255)                                                                                                                                             aTgcgctacgcttatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcagcaatctgaagccgcacatgcggctttt   <  1:364384‑M1/143‑142 (MQ=255)                                                                                                                                              tgcgctacgcttatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcagcaatctgaagccgcacatgcggcttttt  <  1:104938‑M1/143‑143 (MQ=255)                                                                                                                                              |                                                                                                                                               GTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCA  >  NC_000913/899634‑899917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.