| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1310621 = | 36 (1.040) | 17 (0.490) | 17/284 | 1.0 | 35.8% | coding (245/297 nt) | yciI | protein YciI |
| ? | NC_000913 | = 1517349 | 25 (0.720) | intergenic (‑155/‑40) | yncL/ortT | uncharacterized protein YncL/orphan toxin OrtT | |||||
TTGTGGTGGTGAATGCACTGACCGGCTATAAGGAAAGGCCAAACAAGAACACGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCATTGGACCAGCTGTCAACAAACGA > NC_000913/1310479‑1310761 | ttGTGGGCGTGAATGCACGGACCTGCGATAAGTAAAGGCCAAACAAGAACACGGTTGCAAAAACCGTGCCCTTAAAGATTGAATCTCTATTCATAACACTTTCTGAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCg < 2:91122/143‑1 (MQ=255) tggtgAATGCACTGACCGGCTATAAGGAAAGGCCAAACACGAACACGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAACTGGC‑TTCACTGAAACGTGTTCATAGACTCCTCTCGCtacgt > 2:248299/1‑143 (MQ=255) tggtgAATGCACTGACCGGCTATAAGGAAAGGCCAAACAAGAACACGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACAATATCTT‑TATGATGATCACTGCCACGTAGACGTAGACTCCTGCCGCtacgt > 1:454361/1‑143 (MQ=255) ggtgAATGCACTGACCGGCTATAAGGAAAGGCCAAACAAGAACACGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCttcgta > 2:524523/1‑143 (MQ=255) gAATGCACTGACCGGCTATAAGGAAAGGCCAAACAAGAACACGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACgg < 2:569007/143‑1 (MQ=255) gAATGCACTGACCGGCTATAAGGAAAGGCCAAACAAGAACACGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATACACTCCTGCCGCTACGTACgg > 2:458781/1‑143 (MQ=255) aCTGACCGGCTATAAGGAAAGGCCAAACAAGAACACGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGCACACTTTCTTAAATGGT‑TTCACTGAAACGTGTGCATAGACTCCTGCCGCTACGTACGGGTCAGc > 2:505770/1‑143 (MQ=255) cGGCTATAAGGAAAGGCCAAACAAGAACACGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACATTCTGCAATGGT‑TTCACTGAACCGTGTTCATAGACTCATGCCGCTACGTACGGGTCAGCAGCgcc > 2:373800/1‑141 (MQ=255) gtacgggttaagaaaatccgcaataatactcattctgaagatggataagggcaagttgctgtttgatgattttttctcaaactggtgaaaaaacttgatgcacgtcaaaaaatgacgcatGCTACGTACGGGTCAGCATCGGc < 2:60610‑M1/23‑1 (MQ=255) tataAGGAAAGGCCAAACAAGAACACGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAg > 1:484696/1‑143 (MQ=255) gggttaagaacacccgcaatcatactcattctgaagatggataagggcaagttgctgtttgatgattttttctcaaactggtgaaaaaacttgatgcacgtcaaaaaatgacgcatGCTACGTACGGGTCAGCATCGGCCCAg > 1:601330‑M1/117‑143 (MQ=255) gttaagcaaagccgctataatacgcactctgatgatggataagggcaagttgctgtttgatgattttttctcaaactggtgaaaaaacttgatgcacgtcaaaaaatgacgcatGCTACGTACGGGTCAGCATCGGCCCAGGc > 2:284016‑M1/115‑143 (MQ=255) aaGGAAAGGCCAAACAAGAACACGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGCTCAGCTTCGGCCCAGGcc > 1:18308/1‑143 (MQ=255) ggAAAGGCCAAACAAGAACACGGTTGCCAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCCTTGACACCCGCCGCTACGTACGCGTCAGCATCCGCCCAGGCCTg > 2:129738/1‑143 (MQ=255) ggAAAGGCCAAACAAGAACACGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTg > 1:577542/1‑143 (MQ=255) gAAAGGCCAAACAAGAACACGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGa < 1:209209/143‑1 (MQ=255) aaaGGCCAAACAAGACCAGGGTTGTAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACGCCGGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAg < 2:2464/143‑1 (MQ=255) gCCAAACAAGAACACGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAgctgc > 2:434256/1‑143 (MQ=255) aaaCAAGGACACGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACTCTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTCCGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTc < 2:416380/143‑1 (MQ=255) cgaaataatactcattctgaagatggataagggcaagttgctgtttgatgattttttctcaaactggtgaaaaaacttgatgcacgtcaaaaaatgacgcatGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTc > 1:12092‑M1/103‑143 (MQ=255) aaCACGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGAt < 1:182814/143‑1 (MQ=255) aaCACGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGAt > 2:519005/1‑143 (MQ=255) tactcattctgaagatggataagggcaagttgctgtttgatgattttttctcaaactggtgaaaaaacttgatgcacgtcaaaaaatgacgcgtGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGAtt > 1:194506‑M1/95‑143 (MQ=255) cGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCaa < 1:626858/143‑1 (MQ=255) cGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCaa < 1:596184/143‑1 (MQ=255) tcattctgaagatggataagggcaagttgctgtttgatgattttgtctcaaacgggtgaaaaaacttgatgcacgtcaaaaaatgacgcatGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCaa < 1:265549‑M1/52‑1 (MQ=255) cattctgaagatggataagggcaagttgctgtttgatgattttttctcaaactggtgaaaaaacttgatgcacgtcaaaaaatgacgcatGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCaaa > 1:440738‑M1/91‑143 (MQ=255) aaaaaCCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGc > 1:225410/1‑143 (MQ=255) aaaaaCCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACGGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCGGCTTCCAGCGATTCAAATTCAGc > 1:396096/1‑143 (MQ=255) cGTGCCCTTAAATATTGTGTCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCATCGATTCAAATTCAGCAATAAc < 2:29070/143‑1 (MQ=255) cGTGCCCTTAAATATTGAATCTCTATTCAGAACACTGTCTTAAATGGT‑TCCACTGAAACGTGTTCATAGTCTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAAc < 1:343093/143‑1 (MQ=255) ggatcagggcaagttgctgtttgatgattttttctcaaactggtgaaaaaacttgatgcacgtcaaaaaatgacgcatGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAAc > 1:253266‑M1/79‑143 (MQ=255) gataagggcaagttgctgtttgatgattttttctcaaactggtgaaaaaacttgatgcacgtcaaaaaatgacgcatGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACg > 2:230029‑M1/78‑143 (MQ=255) ttAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGCGCTGCTTCCAGCGATTCAAATTCAGCAATCACGGTTGAg > 2:290870/1‑143 (MQ=255) ttAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCCGCGATTCAAATACAGCAATAACGGTTGAg > 1:542231/1‑143 (MQ=255) gggcaagttgctgtttgatgattttttcgcaaactggtgaaaaaacttgatgcacgtcaaaaaatgacgcatGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGa > 2:395095‑M1/73‑143 (MQ=255) caagttgctgtttgatgattttttctcaaactggtgaaaaaacttgatgcacgtcaaaaaatgacgcatGCTACGTACGGGTCAGCATCGGCCCCGGCCTGAGCTGCTTCCCGCGATTCAAATTCACCAAGAACGATCGAGcc < 2:117094‑M1/74‑1 (MQ=255) atatTGAATATCTCGTCGGGTCGCTGTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAg < 2:573255/143‑1 (MQ=255) tatTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCCGCCCAGGCCTGAGCTGCTTACAGCGATTAAAATTCAGCAATAACGGTTGAGCGAGt > 2:184544/1‑143 (MQ=255) aTCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGCGCCAGTAAATcc > 2:152730/1‑143 (MQ=255) ctATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCAGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCCTCCACCGATTCAAATTCAGCCATAACGGTTTAGCCAGTACATCCCGcc > 2:555512/1‑142 (MQ=255) ttCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCAGCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATACCGGGTGAGCCAGTACATCCCGCAGcc > 2:182641/1‑143 (MQ=255) cacTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGAt > 1:8741/1‑143 (MQ=255) caaccttgtgaaagaacctgatccacttcaaaaaaggacgcatGCTACGTCCGGGGCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATCCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGt > 2:85942‑M1/44‑143 (MQ=255) tCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTTCGTACGGGTCAGCAGCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTa < 1:524523/143‑1 (MQ=255) aaactggtgaaaaaacttgatgcacgtcaaaaaatgacgcatGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGtt > 1:60610‑M1/43‑143 (MQ=255) aCTGAAACGTGTAAATAGTCTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTgg < 1:388843/143‑1 (MQ=255) gtcaccGTGTTCATAGGCTCCGGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCa < 1:590323/138‑1 (MQ=255) aaCGTGTTCATAGCCTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCATTg < 2:486428/143‑1 (MQ=255) cacgtcaaaaaatcacgcatGCTACGTACGGCTCAGCATCCGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCATTGGa > 1:71326‑M1/21‑143 (MQ=255) aaaaaatgacgcatGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTGCCGCTGGCGTTGGaccacgt < 1:540304‑M1/129‑4 (MQ=255) aaaaggacgcatGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCATTGGACCAGCTGt > 1:471683‑M1/13‑143 (MQ=255) atGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGATTCCAGCGATTGAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCATCCCCAGGGTCGTTACTGTCTACCGCTGGCATTGGAACAGCGGTCAACAAACGa < 2:1144‑M1/141‑1 (MQ=255) | TTGTGGTGGTGAATGCACTGACCGGCTATAAGGAAAGGCCAAACAAGAACACGGTTGCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGT‑TTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCATTGGACCAGCTGTCAACAAACGA > NC_000913/1310479‑1310761 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |