| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1310621 = | 36 (1.040) | 17 (0.490) | 17/284 | 1.0 | 35.8% | coding (245/297 nt) | yciI | protein YciI |
| ? | NC_000913 | = 1517349 | 25 (0.720) | intergenic (‑155/‑40) | yncL/ortT | uncharacterized protein YncL/orphan toxin OrtT | |||||
TATCATTGCCCCTATGTGTATAGTACGGGTTAAGAAAATCCGCAATAATACTCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGTTTTATTCATCTGGCTGGACGCCCGTACATGTCTCTCTATCAACACATGCTTGTTTTTTATGCGGTTATGGCAGCAATCGCATTTCTTATCACCTGGTTTCTTTCTCACGATAAGAAACGCATCCGTTTC > NC_000913/1517208‑1517490 | tATCATGGCCCCTATGTGTATAGTACGGGTTAATAAAGTCCGCAATAATACTCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCata < 2:531870/143‑1 (MQ=255) aTTGCCCCTATGTGTATAGTACGGGTTAAGAAAATCCGCAATAATACTCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTg < 1:303078/143‑1 (MQ=255) cTATGTGTATAGTACGGGTTAAGAAAATCCGCAATAATACTCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGt > 2:210686/1‑143 (MQ=255) tATGTGTATAGTACGGGTTAAGAAAATCCGCAATAATACTCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGtt < 1:215884/143‑1 (MQ=255) tgtATAGTACGGGTTAAGAAAATCCGCAATAATACTCATTCTGAAGATGGATAAGGGCAAGGTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGTTTTAt > 1:248228/1‑143 (MQ=255) taGTACGGGTTAAGAAAATCCGCAATAATACTCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGTTTTATTCAt < 1:100871/143‑1 (MQ=255) gTACGGGTTAAGAAAATCCGCAATAATACTCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATgctacgtacgggtcagcatcggc < 2:60610‑M2/143‑24 (MQ=255) gggTTAAGAACACCCGCAATCATACTCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATgctacgtacgggtcagcatcggcccag > 1:601330‑M2/1‑116 (MQ=255) gTTAAGCAAAGCCGCTATAATACGCACTCTGATGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATgctacgtacgggtcagcatcggcccaggc > 2:284016‑M2/1‑114 (MQ=255) tAAGAAAATCCGCAATAATACGCATGCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGTTTTATTCATCTGGCTGGAc < 1:418482/143‑1 (MQ=255) aGAAAATCCGCAATAATACTCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGTTTTATTCATCTGGCTGGACGc > 2:422309/1‑143 (MQ=255) gAAAATCCGCAATAATACTCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGTTTTATTCATCTGGCTGGACGcc > 1:104121/1‑143 (MQ=255) aaaaTCCGCAATAATACTCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGTTTTATTCATCTGGCTGGACGccc > 1:173656/1‑143 (MQ=255) cGAAATAATACTCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATgctacgtacgggtcagcatcggcccaggcctgagctgcttc > 1:12092‑M2/1‑102 (MQ=255) tcattaCTCCTTCTGAAGATGGATGAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAACCTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGTTTTATTCATCTGGCTGGACGCCCGTACATGtct < 2:263566/139‑1 (MQ=255) taCTCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCGTgctacgtacgggtcagcatcggcccaggcctgagctgcttccagcgatt > 1:194506‑M2/1‑94 (MQ=255) cTCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGTTTTATTCATCTGGCTGGACGCCCGTACATGTCTCTCTAt < 1:261942/143‑1 (MQ=255) tCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTGTCTCAAACGGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATgctacgtacgggtcagcatcggcccaggcctgagctgcttccagcgattcaa < 1:265549‑M2/143‑53 (MQ=255) cATTCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATgctacgtacgggtcagcatcggcccaggcctgagctgcttccagcgattcaaa > 1:440738‑M2/1‑90 (MQ=255) aGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGTTTTATTCATCTGGCTGGACGCCCGTACATGTCTCTCTATCAACACATGc > 1:458947/1‑143 (MQ=255) ggATCAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATgctacgtacgggtcagcatcggcccaggcctgagctgcttccagcgattcaaattcagcaataac > 1:253266‑M2/1‑78 (MQ=255) gATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATgctacgtacgggtcagcatcggcccaggcctgagctgcttccagcgattcaaattcagcaataacg > 2:230029‑M2/1‑77 (MQ=255) gggCAAGTTGCTGTTTGATGATTTTTTCGCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATgctacgtacgggtcagcatcggcccaggcctgagctgcttccagcgattcaaattcagcaataacggttga > 2:395095‑M2/1‑72 (MQ=255) cAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATgctacgtacgggtcagcatcggccccggcctgagctgcttcccgcgattcaaattcaccaagaacgatcgagcc < 2:117094‑M2/143‑75 (MQ=255) aGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAATAAATGACGCATATTTGCGCGCGTTTTATTCATCTGGCTGGACGCCCGTACATGTCTCTCTATCAACACATGCTTGTTTTTTATGCgg < 1:561284/143‑1 (MQ=255) ttGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGTTTTATTCATCTGGCTGGACGACCGTACATGTCTCTCTATCACCACATGCTAGTTCATTATGCgttg > 2:44571/1‑140 (MQ=255) atgctTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGTTTTATTCATCTGGCTGGACGCCCGTACATGTCTCTCTATCAACACATGCTTGTTTTTTATGCGGTTATGGCAGCaa < 1:60583/143‑1 (MQ=255) atgatTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGTTTTATTCATCTGGCTGGACGCCCGTACATGTCTCTCTATCAACACATGCTTGTTTTTTATGCGGTTATGgcagcag > 1:103079/1‑142 (MQ=255) gctcGAACTGGGGAATAGACTTGATGCGCGTCAAAAAATGTCGCAGGTTTGCGCGCGTTTTATTCATATGGCTGGACGCCCGTACATGTCTCTCTATCAACACAGGCTTGTTTTTTATGCGGTTATGGCAGCAATCGCATTTc < 1:51260/142‑1 (MQ=255) tcAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGTTTTATTCATCTGGCTGGACGCCCGTACATGTATCTCTATCAACACATGCTTGTTTTTTATGCGGTTATGGCAGAAATCGCATGTCtt > 2:217463/1‑143 (MQ=255) cAACCTTGTGAAAGAACCTGATCCACTTCAAAAAAGGACGCATgctacgtccggggcagcatcggcccaggcctgagctgcttccagcgatccaaattcagcaataacggttgagccagtaaatcccgcagcccctggatcgt > 2:85942‑M2/1‑43 (MQ=255) aaaCTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATgctacgtacgggtcagcatcggcccaggcctgagctgcttccagcgattcaaattcagcaataacggttgagccagtaaatcccgcagcccctggatcgtt > 1:60610‑M2/1‑42 (MQ=255) aaacCTTGTTTCACGTGAAAAGCTGACGCATATTTGCGCGCGTTTTATTCATCTGGTTGGTCGCCCGTACATGTCTCTCTATCAACACATGCTTGTTTTTTATGCGGTTATGGCAGCAATCGCATTTCTTATCACCTGGtttc < 2:333904/143‑1 (MQ=255) aaCTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGTTTTATTCATCTGGCTGGACGCCCGTACAGGTCTCTCTATCAACACATGCTTGTTTTTTATGCGGGTCTGGCAGCAATCGCGTTTCTTCTCACCTGGcttgtt > 2:42320/1‑143 (MQ=255) cgcGTCAAAAAATGACGCCTATTTGCGCGCGTTTTATTCATCTGGCTGGACGCCCGTACATGTCTCTCTAGCAACACATGCTTGTTTTTTATGCGGTTATGGCAGCAATCGCATTTCTTATCACCTGGTTTCTTTCTCACGAt < 2:256936/141‑1 (MQ=255) cACGTCAAAAAATCACGCATgctacgtacggctcagcatccgcccaggcctgagctgcttccagcgattcaaattcagcaataacggttgagccagtaaatcccgcagcccctggatcgttactgtctaccgctggcattgga > 1:71326‑M2/1‑20 (MQ=255) gTCAAAAAATGACGCATATTTGCGCGCGTTTTATTCATCTGGCTGGACGCCCGTACATGTCTCTCTATCTGCACGTGGTTGTTGTTGAGGCGGTTGTGGCAGCAATCGCATTTCTTATCACCTGGTTTCTTTCTCACGATAAg > 1:623389/1‑143 (MQ=255) aaaaacTGACGCCTACTTGCGCGCGTTCTATTCATCTGGCTGGACGCCCGTACATGTCTCTCTATCAACACATGCTGGTTTTTTATGCGGTTATGGCAGCAATCGCATTTCTTATCACCTGGTTTCTTTCTCACGATAAGaaa < 1:327/143‑1 (MQ=255) aaaaaaTGACGCATgctacgtacgggtcagcatcggcccaggcctgagctgcttccagcgattcaaattcagcaataacggttgagccagtaaatcccgcagcccctggatcgttactgtctgccgctggcgttggaccacgt < 1:540304‑M2/143‑130 (MQ=255) aaaaGGACGCATgctacgtacgggtcagcatcggcccaggcctgagctgcttccagcgattcaaattcagcaataacggttgagccagtaaatcccgcagcccctggatcgttactgtctaccgctggcattggaccagctgt > 1:471683‑M2/1‑12 (MQ=255) tGACGTATATTTGCGCGCGTTTTATTCATCTGGCTGGACGCCCGTACATGTCTCTCTATCAACACATGCTTGTTTTTTATGCTGTTATGGCAGCAATCGCATTTCTTATCACCTGGTTTCTTTCTCACGATAAGAAACGCATc < 2:104121/143‑1 (MQ=255) aTgctacgtacgggtcagcatcggcccaggcctgagctgattccagcgattgaaattcagcaataacggttgagccagtaaatcccgcatccccagggtcgttactgtctaccgctggcattggaacagcggtcaacaaacga < 2:1144‑M2/143‑142 (MQ=255) | TATCATTGCCCCTATGTGTATAGTACGGGTTAAGAAAATCCGCAATAATACTCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTTGATGATTTTTTCTCAAACTGGTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGTTTTATTCATCTGGCTGGACGCCCGTACATGTCTCTCTATCAACACATGCTTGTTTTTTATGCGGTTATGGCAGCAATCGCATTTCTTATCACCTGGTTTCTTTCTCACGATAAGAAACGCATCCGTTTC > NC_000913/1517208‑1517490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |