| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2354346 | 13 (0.530) | 3 (0.130) | 3/252 | NT | 17.4% | coding (82/1260 nt) | glpB | anaerobic glycerol‑3‑phosphate dehydrogenase subunit B |
| ? | NC_000913 | = 2354369 | 16 (0.690) | coding (105/1260 nt) | glpB | anaerobic glycerol‑3‑phosphate dehydrogenase subunit B | |||||
GAAAGCGAATTTACCCGCTGGGTTTATCAGGGATTGTGTGGTCTGGAGAAGGAGCAGAAAGATGCGCTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGGCCTGCAACTGCAAAAACACGGCCTGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2354204‑2354346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgctTTGACCACGAGTGACAATGGCACAGCGCAGGCCGTGTTTTTGCAGTTGCAGGCCACAGAGTAATCCGGCGAGGCCGCCGCCCATAATGACAGTATCAAAGCGCATCTTTCTGCTCCTTCTCCAGACCACACAATCCCTGA < NC_000913/2354369‑2354230 GAAAGCGAATTTACCCGCTGGGTTTATCAGGGATTGTGTGGTCTGGAGAAGGAGCAGAAAGATGCGCTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGGCCTGCAACTGCAAAAACACGGCCTGCGCT > 1:31486/1‑143GAAAGCGAATTTACCCGCTGGGTTTATCAGGGATTGTGTGGTCTGGAGAAGGAGCAGAAAGATGCGCATTGATACTGTCATTATGAGCGGCAGCATCGCCGGATTACCCGGCCACCGGCAACTGCAAAAACACGACCTacact > 2:218977/1‑138 GGGATGGTGTGGTCTGGAGAAGGAGCATAAAGATGCGCTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGGCCTGCAACTGCAAAAACACGGCCTGCGCTTTGACCACGAGTGACAATGGCACAGCGCA < 2:58707/143‑1 GATTGTGTGGTCTGGAGAAGGAGCAGAAAGATGCTTTTTGTTACTGTCATTATGGGTGGCGGCTTAGCCGGATAACTCAGGGGCGGGCAACTGCAAAAACACGGCCTGCGCTTTGACCACGAGTGACAATGGCACAGCGCAGG < 1:71257/143‑1 GTGTGGTCTGGAGAAGGATCATAAAGTTGCGCTTTTATACTGTCATTATGGGCGTCGTCCTTGCTGGTTTACTCTGTGGTTTGCAACTGCAAAAACACGGCCTGCGCTTTGACCACGAGTGACAATGGCACAGCGCAGGCCGT < 1:377355/143‑1 GCGCTTTGACCACGAGTGACAATGGCACAGCGCAGGCCGTGTTTTTGCAGTTGCAGGCCACAGAGTAATCCGGCGAGGCCGCCGCCCATAATGACAGTATCAAAGCGCATCTTTCTGCTCCTTCTCCAGACCACACAATCCCT < 1:273699/143‑1 GCTTTGACCACGAGTGACAATGGCACAGCGCAGGCCGTGTTTTTGCAGTTGCAGGTCACAGAGTAATCCGGCGAGGCCGCCGCCCATAATGACAGTATCAAAGCGCATCTTTCTGCTCCTTCTCCAGACCACACAATCCCTGA < 1:476787/143‑1 GAAAGCGAATTTACCCGCTGGGTTTATCAGGGATTGTGTGGTCTGGAGAAGGAGCAGAAAGATGCGCTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGGCCTGCAACTGCAAAAACACGGCCTGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2354204‑2354346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgctTTGACCACGAGTGACAATGGCACAGCGCAGGCCGTGTTTTTGCAGTTGCAGGCCACAGAGTAATCCGGCGAGGCCGCCGCCCATAATGACAGTATCAAAGCGCATCTTTCTGCTCCTTCTCCAGACCACACAATCCCTGA < NC_000913/2354369‑2354230 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |