| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2354346 | 13 (0.530) | 3 (0.130) | 3/252 | NT | 17.4% | coding (82/1260 nt) | glpB | anaerobic glycerol‑3‑phosphate dehydrogenase subunit B |
| ? | NC_000913 | = 2354369 | 16 (0.690) | coding (105/1260 nt) | glpB | anaerobic glycerol‑3‑phosphate dehydrogenase subunit B | |||||
GAAAGCGAATTTACCCGCTGGGTTTATCAGGGATTGTGTGGTCTGGAGAAGGAGCAGAAAGATGCGCTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGGCCTGCAACTGCAAAAACACGGCCTGCGCTGTGCCATTGTCACTCGTGGTCAAAGCGCACTGCATTTCTCATCCGGATCGCTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCAT > NC_000913/2354204‑2354486 | gAAAGCGAATTTACCCGCTGGGTTTATCAGGGATTGTGTGGTCTGGAGAAGGAGCAGAAAGATGCGCTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGGCCTGCAACTGCAAAAACACGGCCTGCGCT > 1:31486‑M1/1‑143 (MQ=255) tCAGGGATTGTGTGGTCTGGAGAAGGAGCAGAAAGATGCGCTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGACCTGCAACTGCAAAAACACGGCCTGCGCTGTGCCATTGTCACTCGTGGTCAAagc < 1:476787‑M2/143‑4 (MQ=255) aGGGATTGTGTGGTCTGGAGAAGGAGCAGAAAGATGCGCTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGGCCTGCAACTGCAAAAACACGGCCTGCGCTGTGCCATTGTCACTCGTGGTCAAagcgc < 1:273699‑M2/143‑6 (MQ=255) gggATGGTGTGGTCTGGAGAAGGAGCATAAAGATGCGCTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGGCCTGCAACTGCAAAAACACGGCCTGCGCTttgaccacgagtgacaatggcacagcgca < 2:58707‑M1/143‑30 (MQ=255) gATTGTGTGGTCTGGAGAAGGAGCAGAAAGATGCTTTTTGTTACTGTCATTATGGGTGGCGGCTTAGCCGGATAACTCAGGGGCGGGCAACTGCAAAAACACGGCCTGCGCTttgaccacgagtgacaatggcacagcgcagg < 1:71257‑M1/143‑32 (MQ=255) gtgtgGTCTGGAGAAGGATCATAAAGTTGCGCTTTTATACTGTCATTATGGGCGTCGTCCTTGCTGGTTTACTCTGTGGTTTGCAACTGCAAAAACACGGCCTGCGCTttgaccacgagtgacaatggcacagcgcaggccgt < 1:377355‑M1/143‑36 (MQ=255) tGGAGAACGAGCAGAAAGATGCGCTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTTTCCTGCAACTGCAAAAACACGGACTGCACTATGACATTATCACTCGTGGTCAAAGCGCACTGCATTTCTCATc > 1:397236/1‑143 (MQ=255) gagaAGGAGCAGAAAGATGCGCTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGGCCTGCAACTGCAAAAACACGGCCTGCGCTGTGCCATTGTCACTCGTGGTCAAAGCGCACTGCATTTCTCATCCg > 1:420616/1‑143 (MQ=255) gagaAGGAGCAGAAAGATGCGCTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGGCCTGCAACGGCAAAAACACGGCCTGCGCTGTGCCATTGTCACTCGTGGTCAAAGCGCACTACATTTCTCATcct > 2:252261/1‑142 (MQ=255) gAGCAGAAAGATGCGCTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTCGCCTGCAACTGCAAGAACACGGCCTGCGCTGTGCAATTGTCACTCGTGGTCAAAGCGCACTGCGTTTCTCATCCgctgtgc > 2:44177/1‑137 (MQ=255) gcgcTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGGCCTGCAACTGCAAAAACACGGCCTGCGCTGTGCCATTGTCACTCGTGGTCATGGCGTCCTACATTTCTCATCCGGATCGCTGGATTTGCTGa < 2:31486/143‑1 (MQ=255) cTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGGCCTGCAACTGCAAAAACACGGCCTGCGCTGTGCCATTGTCACTCGTGGTCAAAGCGCACTGCATTTCTCATCCGCATCGCTGGCTTTGCTGCGcc > 2:273278/1‑143 (MQ=255) tGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGGCCTGCAACTGCACTAACACGGCCTGCGCTGTGCTATTGTCACTCGTGGACAAAGCGCACTGCATTTCTCATCCGGATCGCTGGCTTTGCTGAGCCATCTGCCAg > 1:6101/1‑143 (MQ=255) ccgcatACTCTGTTGCCTGCCACTGCAAAAGCGCGGCCTGCGCTGTGCCATTGTCACTCGTGGTCAAAGCGCACTGCATTTCTCATCCGGATCGCTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTc < 2:377132/138‑1 (MQ=255) tACTCTGTGGCCTGCAACTGCAAAAACACGGCCTGCGCTGTGCCTTTGTCACTCGTGGTCAAAGCGCACTGCATTTCTCATCCGGATCGCTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGt < 1:368463/143‑1 (MQ=255) caactgcaaACACACTGCCTTCTCTGTGCCATTGTCACTCGTGGTCAAAGCGCACTGCATTTCTCATCCGGATCGCTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCttt < 2:71736/143‑1 (MQ=255) caactccaaGAACTCGGCCGTCGCTGTGCCATTGCCGCTCGTGGTCAAAGCGCACTGCATTTCTCATCCGGATCGCTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCttt < 2:173069/143‑1 (MQ=255) aagaaCACGGCCTGCGCGGTGCCATTGTCACGCGTGCGCAAAGCGCACTGCATTTCTCATCCGGATCGCTGTATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTcag < 2:380071/140‑1 (MQ=255) acGGCCTGCGCTGTGCCATTGTCACTCGTGGTCAAagcgcaggccgtgtttttgcagttgcaaaccacagagtaaaccagcaaggacgacgcccataatgacagtataaaagcgcaactttatgatccttctccagaccacac < 1:377355‑M2/143‑109 (MQ=255) acGGCCTGCGCTGTGCCATTGTCACTCGTGGTCAACGCGCACTGCATTTCTCATCCGGCTCGCTGAATTTGCAGAGAAATAAGACAGAAGGACAACCGGAGACAGACATTCACAGTGGACGGGAATCTTAGAGTCAGCAGGCa > 1:30649/1‑143 (MQ=255) ccTGCGCTGTGCCATTGTCACTCGTGGTCAAagcgcaggccgtgtttttgcagttgcccgcccctgagttatccggctaagccgccacccataatgacagtaacaaaaagcatctttctgctccttctccagaccacacaatc < 1:71257‑M2/143‑113 (MQ=255) tGCGCTGTGCCATTGTCACTCGTGGTCAAagcgcaggccgtgtttttgcagttgcaggccacagagtaatccggcgaggccgccgcccataatgacagtatcaaagcgcatctttatgctccttctccagaccacaccatccc < 2:58707‑M2/143‑115 (MQ=255) gcgcTttgaccacgagtgacaatggcacagcgcaggccgtgtttttgcagttgcaggccacagagtaatccggcgaggccgccgcccataatgacagtatcaaagcgcatctttctgctccttctccagaccacacaatccct < 1:273699‑M1/143‑139 (MQ=255) gcTttgaccacgagtgacaatggcacagcgcaggccgtgtttttgcagttgcaggtcacagagtaatccggcgaggccgccgcccataatgacagtatcaaagcgcatctttctgctccttctccagaccacacaatccctga < 1:476787‑M1/143‑141 (MQ=255) | GAAAGCGAATTTACCCGCTGGGTTTATCAGGGATTGTGTGGTCTGGAGAAGGAGCAGAAAGATGCGCTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGGCCTGCAACTGCAAAAACACGGCCTGCGCTGTGCCATTGTCACTCGTGGTCAAAGCGCACTGCATTTCTCATCCGGATCGCTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCAT > NC_000913/2354204‑2354486 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |