| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_000913 | 4,001,645 | Δ5 bp | 90.0% | coding (220‑224/951 nt) | corA → | Ni(2(+))/Co(2(+))/Mg(2(+)) transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001644 | 5 (0.180) | 45 (1.600) | 40/264 | NT | 90.0% | coding (219/951 nt) | corA | Ni(2(+))/Co(2(+))/Mg(2(+)) transporter |
| ? | NC_000913 | 4001650 = | 5 (0.180) | coding (225/951 nt) | corA | Ni(2(+))/Co(2(+))/Mg(2(+)) transporter | |||||
GGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4001508‑4001644‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGT > NC_000913/4001650‑4001779 GGATTGGTCTTGTCGAACCGGACGACGACGAGGGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCACGGAACTGGAAGACATCGAAGCATCTGCATGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTT < 2:480963/143‑1GGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGAAATCGAAGCATCGGCACGTATCTTTGAAGACGACGACGGCCTGCATCTCCTT > 1:497190/1‑143 ATTGATCTTGTCGAACCGGACGACGACGAGGGGCTGCGCGTAGAATCTGAACTTGGCCAGAGGCTGGCAACCCGCCCGGAACTGGAAGACGTCGCAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCGCCTTCT > 2:196558/1‑143 ttcagCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGATCTTGGCCAGAGCCTGGCAACGCGGCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTT < 1:207146/138‑1 TCTTGTCGTACCGGATGATGTCTTGCGATTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCGCGGGACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTC < 1:233237/143‑1 TCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTCTCGTGGAAGACGACCACGGCCTGCATCTCCTTCCTCCTC > 2:19728/1‑143 TCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGATTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTC > 1:333922/1‑143 CTTGTGTAACCGGCCTACGACGACCGATTGCTTGTACAATCTGAACTTGGCCAGAGCCAGGCAACCCGCCCGGGACTGGAAGACAGCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCT < 1:146915/143‑1 tgcacAACCGGCCGACGCCGAGCGACGGCGCGAACAACCTGAACGTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTT < 1:189655/138‑1 TGTCGGACCGTACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGTAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTT < 2:361060/143‑1 GTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCTCCCGGAACTGGAAGACATCGAAGCATAGGAACGTTTCTTTGAAGACGACGCCGGCCTGCATCTCCTTCTTCTTCTTTG > 1:58806/1‑143 CGAATCGGACGACGACGAGCGACTGCGCGTACAATCTGATCTTGGTCTGAGCTTGGCATCCTTTCTGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAA < 1:225737/143‑1 CGAACCGGATGACGACGAGCTACTGCGCGTATAATCTGAGCTTGGCCTTATCCTGTTATTCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAA < 1:547814/143‑1 GAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGCAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCCTCTTCTTCTTTGAAG > 2:379831/1‑143 CGGCCGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCCGCATCTCCTTCTTCTTCTTTGAAGATGC > 2:539238/1‑143 CGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGC < 2:519507/143‑1 GGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACCTCGTAGCATCGGCACGTTTCTTTGAAGACGACGACGGACTGAATCTACTTCTTCTTCTTTGAAGATGCG > 1:226304/1‑143 GACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGATTATTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGG > 1:308574/1‑143 ACGATGACCAGTGACTGCTCTTTCATTCTTATTTTTTCCACAGCATGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGA < 1:106872/143‑1 GACGAGCGACTGCGCGTACACTCAGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGCAGATGCGacaaacc > 2:492327/1‑136 GACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTATTTGAAGATGCGGAAGATC > 1:214554/1‑143 ACGTGCGACTGCGCGTACAATCTGAACTTGGCCAGGGGCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCA < 1:123431/143‑1 GAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACG > 1:411013/1‑143 GCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCATTCTTCTTCTTTGAAGATGCGGAAGATCACGCC > 1:325678/1‑143 ctACTGGGCGTACATGCTGAGCTTGTCCAGGGCCTGGCAACCCGCGCGGAACTGGAAGACGTCGAAGCATCGGCACGTTTCTTTGGAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCG < 2:505976/141‑1 GACTGCTCGTACAATCTGAACTCGGCCAGAGCCTGGCAACCCGCCCGGAACTGTAAGACCTCGATGCACCGTCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGG < 2:13244/143‑1 ACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTATTCTTCTTTGAAGATGCGGCAGATCACGCCGGT > 2:383239/1‑143 GCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGCAAGATCACGCCGGTAAC > 2:524713/1‑143 CAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCCCGCCGGTAACTCCACTG > 2:503362/1‑143 GCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGACGATCACGCCGGTAACTCCACTGTGGCATTTACCAT > 2:111377/1‑143 CTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGACCACGCCGGTAGCTCCCCTGTGGCACTTACCATCCGggctg > 2:461178/1‑138 AACCCGCCCGGAACTGGAAGGCATCGCAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGT < 2:325752/143‑1 ACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGCAGTGGCGGAAGCTCACGCCGGTAACTCCAAAGAGGAATTTACCATCCGTGATGGaggtc > 1:21603/1‑138 CTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGC < 1:490405/143‑1 GAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTG > 2:534600/1‑143 GACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTAGTCAGATTCCTATGCTTGGGC > 2:29596/1‑143 ACATTGAACCATCGGCACGTTTCTTTGAAGATGACGACGGTCTGCATTTTCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCG < 1:19571/143‑1 ATCGAAGCATTGGCTCGTTCCTTCGAAGACGTCTTCGGTCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATTACGCCGGTAACTCCGCGGGGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTG < 1:511863/143‑1 TCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAAATCACGCCGCTAACTCCACAGTGCAATTTACCATCCGTGATGGTCGACTGTTTACTCTGCGAGAGCGTGA > 1:375424/1‑143 AAGCATCGGCACGTTTCTTTGAAGACGACTATGGCTTGTTTTTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACT < 1:428982/143‑1 TTTCTTTGAAGACGACGACGTCTTGCATCTCTTTCTTCTTCTTTTATGTTGCGTAAGATCACGCCGGTAACTCCACTGAGGCAGTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGT < 1:50039/143‑1 TTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGT < 1:497317/143‑1 tgtcgtgCGACGACGGCCTGCATCTCCTTCTTCTTCTTTGTAGATGCGGAAGCTCACGCCGGTAACTCGACTGTTGCGTTTACCATTCGTGCTGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTA < 2:340926/136‑1 GAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATC < 1:453969/143‑1 cgtccGCCTGCATCTTCTTCTTCTTCTTTGAAGGTGCTGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGT < 2:490753/138‑1 GGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4001508‑4001644‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGT > NC_000913/4001650‑4001779 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |