| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_000913 | 4,001,645 | Δ5 bp | 90.0% | coding (220‑224/951 nt) | corA → | Ni(2(+))/Co(2(+))/Mg(2(+)) transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001644 | 5 (0.180) | 45 (1.600) | 40/264 | NT | 90.0% | coding (219/951 nt) | corA | Ni(2(+))/Co(2(+))/Mg(2(+)) transporter |
| ? | NC_000913 | 4001650 = | 5 (0.180) | coding (225/951 nt) | corA | Ni(2(+))/Co(2(+))/Mg(2(+)) transporter | |||||
CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACT‑GTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGT > NC_000913/4001502‑4001773 | cAGTATGGTTTGATCTTGTCGAATCGGACGATGATGATCTATTGCTCGTACAAAATGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCCCGTTTCTTTGAAGACGACGACGGCCTGCat < 1:398281/143‑1 (MQ=255) ggATTGGTCTTGTCGAACCGGACGACGACGAGGGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCACGGAACTGGAAGACATCGAAGCATCTGCATGTTTCTTTGAAGACGACGACGGCCTGCATctcctt < 2:480963‑M1/143‑7 (MQ=255) ggATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGAAATCGAAGCATCGGCACGTATCTTTGAAGACGACGACGGCCTGCATctcctt > 1:497190‑M1/1‑137 (MQ=255) aTTGATCTTGTCGAACCGGACGACGACGAGGGGCTGCGCGTAGAATCTGAACTTGGCCAGAGGCTGGCAACCCGCCCGGAACTGGAAGACGTCGCAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATcgccttct > 2:196558‑M1/1‑135 (MQ=255) ttcagcttgtcGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGATCTTGGCCAGAGCCTGGCAACGCGGCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttctt < 1:207146‑M1/138‑10 (MQ=255) tCTTGTCGTACCGGATGATGTCTTGCGATTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCGCGGGACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttc < 1:233237‑M1/143‑14 (MQ=255) tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTCTCGTGGAAGACGACCACGGCCTGCATctccttcctcctc > 2:19728‑M1/1‑130 (MQ=255) tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGATTCTTTGAAGACGACGACGGCCTGCATctccttcttcttc > 1:333922‑M1/1‑130 (MQ=255) cTTGTGTAACCGGCCTACGACGACCGATTGCTTGTACAATCTGAACTTGGCCAGAGCCAGGCAACCCGCCCGGGACTGGAAGACAGCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttct < 1:146915‑M1/143‑15 (MQ=255) tgcacaaccggcCGACGCCGAGCGACGGCGCGAACAACCTGAACGTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttt < 1:189655‑M1/138‑17 (MQ=255) tGTCGGACCGTACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGTAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttt < 2:361060‑M1/143‑17 (MQ=255) gTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCTCCCGGAACTGGAAGACATCGAAGCATAGGAACGTTTCTTTGAAGACGACGCCGGCCTGCATctccttcttcttctttg > 1:58806‑M1/1‑126 (MQ=255) cGAATCGGACGACGACGAGCGACTGCGCGTACAATCTGATCTTGGTCTGAGCTTGGCATCCTTTCTGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa < 1:225737‑M1/143‑20 (MQ=255) cGAACCGGATGACGACGAGCTACTGCGCGTATAATCTGAGCTTGGCCTTATCCTGTTATTCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa < 1:547814‑M1/143‑20 (MQ=255) gAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGCAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccctcttcttctttgaag > 2:379831‑M1/1‑123 (MQ=255) cGGCCGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCCGCATctccttcttcttctttgaagatgc > 2:539238‑M1/1‑119 (MQ=255) cGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgc < 2:519507‑M1/143‑25 (MQ=255) ggACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACCTCGTAGCATCGGCACGTTTCTTTGAAGACGACGACGGACTGAATctacttcttcttctttgaagatgcg > 1:226304‑M1/1‑118 (MQ=255) gacgacgacGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGATTATTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgg > 1:308574‑M1/1‑117 (MQ=255) acgatgaccAGTGACTGCTCTTTCATTCTTATTTTTTCCACAGCATGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgga < 1:106872‑M1/143‑28 (MQ=255) gattacgaTCGACTGTGTGTATATTCTGAATTTGGTTATTGTTTGGCAAACGGCAGGGAACTGGAAGACATCGAAGCATCGGCACGTTTCGTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAg < 1:79514/139‑1 (MQ=255) gacgaGCGACTGCGCGTACACTCAGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgcagatgcgacaaacc > 2:492327‑M1/1‑111 (MQ=255) gacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttatttgaagatgcggaagatc > 1:214554‑M1/1‑111 (MQ=255) acgtGCGACTGCGCGTACAATCTGAACTTGGCCAGGGGCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatca < 1:123431‑M1/143‑34 (MQ=255) gaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacg > 1:411013‑M1/1‑108 (MQ=255) gCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcattcttcttctttgaagatgcggaagatcacgcc > 1:325678‑M1/1‑106 (MQ=255) ctactGGGCGTACATGCTGAGCTTGTCCAGGGCCTGGCAACCCGCGCGGAACTGGAAGACGTCGAAGCATCGGCACGTTTCTTTGGAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccg < 2:505976‑M1/141‑39 (MQ=255) gACTGCTCGTACAATCTGAACTCGGCCAGAGCCTGGCAACCCGCCCGGAACTGTAAGACCTCGATGCACCGTCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccgg < 2:13244‑M1/143‑40 (MQ=255) aCTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttattcttctttgaagatgcggcagatcacgccggt > 2:383239‑M1/1‑103 (MQ=255) gcgcGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgcaagatcacgccggtaac > 2:524713‑M1/1‑100 (MQ=255) cAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcccgccggtaactccactg > 2:503362‑M1/1‑93 (MQ=255) aaCTTGGTTAGAGCCTGGCACACCGCGCGGAACGGGAAGACATCGAAGCATCGGCACGTTGCTTTGAAGACGGCTACTGTCTGCA‑‑‑‑‑GCGTCTTCTTCTTCTTTGAAGAGGCGGAAGATCACGCCGGTAACTCCACT‑GTGGCAtt < 1:355776/143‑1 (MQ=255) gCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggacgatcacgccggtaactccactgtggcatttaccat > 2:111377‑M1/1‑80 (MQ=255) tagagCCTGGCTACTCGTCTGTTACTGTAATTCATTGTAGTATCGGTTTGTTTCGTTGAAGACGACGACGGCCGGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACT‑GTGGCATTTACCATcc < 1:211769/142‑1 (MQ=255) cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagaccacgccggtagctcccctgtggcacttaccatccgggctg > 2:461178‑M1/1‑72 (MQ=255) aaCCCGCCCGGAACTGGAAGGCATCGCAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgt < 2:325752‑M1/143‑77 (MQ=255) aCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgcagtggcggaagctcacgccggtaactccaaagaggaatttaccatccgtgatggaggtc > 1:21603‑M1/1‑66 (MQ=255) gcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTATGAAGATACACAAGATCACGTCGGTCACTCCACT‑AGCGCATGTACCAGACGTGCGGGTCGACTggt > 2:61416/1‑141 (MQ=255) cTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgc < 1:490405‑M1/143‑90 (MQ=255) gAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtg > 2:534600‑M1/1‑51 (MQ=255) gACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtagtcagattcctatgcttgggc > 2:29596‑M1/1‑48 (MQ=255) aCATTGAACCATCGGCACGTTTCTTTGAAGATGACGACGGTCTGCATtttcttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcg < 1:19571‑M1/143‑97 (MQ=255) aTCGAAGCATTGGCTCGTTCCTTCGAAGACGTCTTCGGTCTGCATctccttcttcttctttgaagatgcggaagattacgccggtaactccgcgggggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtg < 1:511863‑M1/143‑99 (MQ=255) tCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaaaatcacgccgctaactccacagtgcaatttaccatccgtgatggtcgactgtttactctgcgagagcgtga > 1:375424‑M1/1‑44 (MQ=255) tCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGAGGCGGGGCACGCGGGTAA‑AGAACTAGTTTCTCTGACCATCCGTGAAGGCCGGCTGTTTACTCTgcgtgagcgggc > 2:404277/1‑140 (MQ=255) aaGCATCGGCACGTTTCTTTGAAGACGACTATGGCTTGTTTttccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaact < 1:428982‑M1/143‑103 (MQ=255) tttCTTTGAAGACGACGACGTCTTGCATctctttcttcttcttttatgttgcgtaagatcacgccggtaactccactgaggcagttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgt < 1:50039‑M1/143‑116 (MQ=255) tttCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgt < 1:497317‑M1/143‑116 (MQ=255) tgtcgtgcgacgacggcctgcaTctccttcttcttctttgtagatgcggaagctcacgccggtaactcgactgttgcgtttaccattcgtgctggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgta < 2:340926‑M1/136‑121 (MQ=255) gAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatc < 1:453969‑M1/143‑123 (MQ=255) cgtccgcctgcATcttcttcttcttctttgaaggtgctgaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgt < 2:490753‑M1/138‑131 (MQ=255) | CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACT‑GTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGT > NC_000913/4001502‑4001773 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |