New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4532946 =	56 (1.110)	3 (0.060)	3/252	NT	5.6%	coding (238/747 nt)	yjhP	KpLE2 phage‑like element; putative methyltransferase YjhP
	?	NC_000913	4532970 =	48 (0.990)					coding (214/747 nt)	yjhP	KpLE2 phage‑like element; putative methyltransferase YjhP

GCTAGCAGCTCCTCCGCCCCGGCAAACCCACCGGCAATCCATGTCGCGCCGACGCAGGCCGCCACGTCACATTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTGCCGAGGTCAAGAATGCGGGTGCCCGGCTTCATGCGC  >  NC_000913/4532804‑4533088                                                                                                                                               |                                                                                                                                                gcTCGCCGCCCCTCCGCCCCGGCCAACCCCCCGGCAATCCCTGTCGCGCCGACGCAGGCCGCCCCGTCTCGTTTCTCTTTTGCGACGTAACCGGCCGCATCGTTATGAATCAAATGTACGCGTTCGCTGACGCCGAGttcttc                                                                                                                                                 <  2:801302/143‑1 (MQ=255) gcTAGCAGCTCCTCCGCCCCGGCAAACCCACCGGCAATCCATGTCGCGCCGACGCAGGCCGCCACGTCACATTTTTCATTTGCGACGTAACCGGCCGCAACCATATCATTGTTGTGTACGCGTTCGCTGGCGCCGCGttcttc                                                                                                                                                 >  1:180600/1‑143 (MQ=255)  cTAGCAGCTCCTCCGCCCCGGCAAACCCACCGGCAATCCATGTCGCGCCGACGCAGGCCGCCACGTCACATTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTcc                                                                                                                                                <  1:603830/143‑1 (MQ=255)     ccacgctgggtcgcgtgctgcgcatgaagccgggcacccgcattcttgacctcggcagcggctcgggcgagatgctctgcacctgggccagggaccatggcattgcgggggctggcacccacatgagcgcgctctgcaCcgcg                                                                                                                                             <  2:372658‑M1/5‑1 (MQ=255)      cacgctgggtcgcgtgctgcgcatgaagccgggcacccgcattcttgacctcggcagcggctcgggcgagatgctctgcacctgggccagggatcatggcattacggggactggcatcgacatgagttcgctcttcaCcgcg‑c                                                                                                                                           >  1:280871‑M1/138‑143 (MQ=255)        gcgcctccGCCCTGGTAATCCCACCGGCGATCCATGTCGCGCCGACGCAGGCCGCCACGTCACATTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGa                                                                                                                                         <  2:751133/140‑1 (MQ=255)         ctcctcCGCCCCGGCAAACCCACCGGCAATCCATGTCGCGCCGACGCAGGCCGCCACGTCACATTTTTCATTTGCGACGTAACCGGCCGCAGAGCTATGACTAAAATGTACGCGTTCGCTGACGCCGAGTCCTTCcgcg‑cgcc                                                                                                                                        >  2:481551/1‑141 (MQ=255)            ctccGCCCCGGCAAACCCACCGGCAATCCATGTCGCGCCGACGCAGGCCGCCACGTCACATTCTTCATTTGCGACGTAACCGGCCGCCTCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGCGTTCTTCCGCG‑CGAAGCt                                                                                                                                     >  2:680659/1‑143 (MQ=255)             tccGCCCCGGCAAACCCACCGGCAATCCATGTCGCGCCGACGCAGGCCGCCACGTCACATTTTTCATTTGCGACGTAACCGGCCGCCTCGTTATGAATAACATGTACGCGTTCGCTGACGCCGCGAGCTTCCGAG‑CGACGCtg                                                                                                                                    >  2:630093/1‑142 (MQ=255)                gCCCCGGCAAACCCACCGGCAATCCATGTCGCGCCGACGCAGGCCGCCACGTCACATTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGc                                                                                                                                 <  1:871210/143‑1 (MQ=255)                    cGGCAAACCCACCGGCAATCCATGTCGCGCCGACGCAGGCCGCCACGTCACATTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTgc                                                                                                                             >  1:48887/1‑143 (MQ=255)                          agccgccGGCGAGCCGTGTCGCGCCGACGCAGGCCGCCACGGCACATTTTTCATTTGCGGCGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTg                                                                                                                       <  2:404665/138‑1 (MQ=255)                            cccccGGCAATCCATGTCGCGCCGACGCAGGCCGCCACGTCACATTTTTCATTTGCGCCGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGaa                                                                                                                     <  1:331023/140‑1 (MQ=255)                            ccACCGGCAATCCATGTCGCGCCGACGCAGGCCGCCACGTCACATTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGaa                                                                                                                     <  1:870283/143‑1 (MQ=255)                            ccACCGGCAATCCATGTCGCGCCGACGCAGGCCGCCACGTCACATTTTTAATTTGAGACACAACCGCCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTgca                                                                                                                     >  1:934306/1‑141 (MQ=255)                            ccACCGGCAATCCATGTCGCGCCGACGCAGGCCGCCACGTCACATTTGTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGaa                                                                                                                     <  2:602577/143‑1 (MQ=255)                              gccGGCGAGCCATGTCGCGCCGACGCCGGCGGCCATGTCACATTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCAAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAaga                                                                                                                   <  2:143803/142‑1 (MQ=255)                              gcatgcgggcacccgcattcttggcctcggcagcgtctcgggctggaggcgctgcacctgggccaggggtcatggcattacggggactggcatcgacatgagttcgcgcttcaCCGCG‑CGACGCTTTGCCTGCGCGGTGAaga                                                                                                                   >  2:362815‑M1/114‑143 (MQ=255)                                   ccaTCCATGTCTCGCCGACGCCGGCCGCTCCGTCACATCTTTCATTTGCGCCGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGaa                                                                                                              <  1:339424/141‑1 (MQ=255)                                   cattCCATGTCGCGCCGACGCAGGCCGCCCCGTCACATTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGaa                                                                                                              <  2:599245/140‑1 (MQ=255)                                      tCCATGTCGCGCCGACGCAGGCCGCCACGTCACATTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTGCGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGACCGGCGAAGAGCGAAccc                                                                                                           >  2:55072/1‑141 (MQ=255)                                       ccATGTCGCGCCGCCGCAGGCCGCCACGTCACATTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCa                                                                                                          <  1:608172/143‑1 (MQ=255)                                        cacgccccgcCGACGCAGGCCGCCACGTCACACTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCTTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCAt                                                                                                         <  1:207449/136‑1 (MQ=255)                                          tttCGCGCCGACGCGGGCCGCCACGTCCCATTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGt                                                                                                       <  2:549147/141‑1 (MQ=255)                                           gTCGCGCCGACGCAGGCCGCCACGTCACATTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTc                                                                                                      >  1:984342/1‑143 (MQ=255)                                                    aCGCAGGCCGCCACGTCACATTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGCACTCATGTCGGTGCCAGt                                                                                             >  1:445984/1‑143 (MQ=255)                                                        aGGCCGCCACGTCACATTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCCGTcccc                                                                                         >  2:898989/1‑143 (MQ=255)                                                          gccgccACGTCACATTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑GGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCAGGTCGCTGCCAGGCCCCGt                                                                                       >  2:978146/1‑143 (MQ=255)                                                             gccACGTCACATTTTTCATTTGCGACATAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGATTTGCCTGCGCGGTGAAGAGCGAACTCATGTAGACGCTAGTCGCCGTagt                                                                                    >  2:287206/1‑141 (MQ=255)                                                              ccACGTTACATTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCCGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATg                                                                                   <  2:206251/143‑1 (MQ=255)                                                                    tacaTTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGa                                                                             <  2:94878/142‑1 (MQ=255)                                                                     acaTTTTTCATTTGCGACGTAACCGGCCGCCTCAGTCGGAGTAATTTGTGGGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTACTGCCATGAt                                                                            >  1:678314/1‑143 (MQ=255)                                                                        tttttCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGGGCGAACTCATGTCGCTGCCAGTCCCCGGAGTGCCATGAGccc                                                                         >  2:389363/1‑143 (MQ=255)                                                                           ttCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTgg                                                                      <  1:968370/143‑1 (MQ=255)                                                                           ttCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTgg                                                                      <  1:706570/143‑1 (MQ=255)                                                                              aTTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTGGCCTGCGCGGTGAAGAGCGAACTCATGTCGATACCAGTCCCCGTAATGCCATGATCCCTGGccc                                                                   >  2:797289/1‑143 (MQ=255)                                                                              aTTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCAGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGCACTAATGTCGATGCCAGTCCGCGGAATGCCATGATCCCTGGccg                                                                   >  2:851292/1‑142 (MQ=255)                                                                               gtttggtcGTAACCGGCCGCATCGTTATGTATAATATGTACGCGTTCGCGGACGCCGAGTTCTTCCGCG‑CGCCGCGTTGCCTGCGTGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCa                                                                  <  2:115726/136‑1 (MQ=255)                                                                                      cGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCag                                                           >  1:656453/1‑143 (MQ=255)                                                                                        tAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTGATGCCATGACCCCTGGCCCAGGCGGagag                                                         >  2:760014/1‑143 (MQ=255)                                                                                        tAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCagag                                                         >  1:207840/1‑143 (MQ=255)                                                                                        tAACCGGCCGCATCGTTATGAAGAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCagag                                                         <  2:552853/143‑1 (MQ=255)                                                                                         aaCCGGCCGCGTCGTTATGATTAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGc                                                        <  2:103005/143‑1 (MQ=255)                                                                                         aaCCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGc                                                        >  2:544043/1‑143 (MQ=255)                                                                                         aaCCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGGCCCCGTAGTGCCATGATCCCTGGCCCAGGTGccgggc                                                        >  2:59444/1‑138 (MQ=255)                                                                                           ccGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCGTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTCATGCCATGATCCCTGGCCCAGGTGCAGAGCAt                                                      <  2:519084/143‑1 (MQ=255)                                                                                            cgtccGCATCGGTATGACTAACATGTACGCGTTCGCCGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGCGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCAtc                                                     <  2:425834/140‑1 (MQ=255)                                                                                             ggCTGCTTCGTTATGGAGAGCATGTACGCGTTCGCTGACGCCGTGTTCCTCCGCG‑CGACGCTTTGCCTGCGCGGTGTAGAGCGATCTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGTTCAGGTGCAGAGCAtct                                                    <  2:493143/143‑1 (MQ=255)                                                                                               cggcctCGTTATGACTAAGATGTACGCGGTCGCCGACGCCGAGTTCTTCCGCG‑CGCCGCTTTGCCTGCGCGGTGAAGCGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCg                                                  <  2:19618/138‑1 (MQ=255)                                                                                                 gCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGCTGCAGAGCATCTCAcc                                                >  1:734120/1‑143 (MQ=255)                                                                                                 gCACCGTTATGAATAAAAGGGACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGcc                                                <  2:48887/143‑1 (MQ=255)                                                                                                      gTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGc                                           >  1:626325/1‑143 (MQ=255)                                                                                                       ggcattacggggactggcatcgacatgagttcgctcttcaCCGCG‑CGACGCTTTGCCTGCGCGGt                                                                                                                        >  2:657039‑M1/41‑65 (MQ=255)                                                                                                       ggcattacggggactggcatcgacatgagttcgctcttcaCCGCG‑CGACGCTTTGCCTGCGCGGt                                                                                                                        <  1:657039‑M1/25‑1 (MQ=255)                                                                                                          tGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCt                                       >  1:864550/1‑143 (MQ=255)                                                                                                            aaTAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCGTGGCCCAGGTGCAGAGCATCTCGCCCTAGCCGCTGc                                     >  1:67019/1‑143 (MQ=255)                                                                                                                     tgcgtggtCGCTGACGCCGAGTTCTCCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTGCCGAGGTCaa                            <  2:357336/136‑1 (MQ=255)                                                                                                                      aCGCGTTCGCTGACGCCGAGTTCTTCCGCGAGGACAATGT‑TGTTCGGGGTGCAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTGCCGAGGTCAAg                           <  1:929929/143‑1 (MQ=255)                                                                                                                      aCGCGGTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGACCTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTGCCGAGGTCAAg                           <  2:538058/143‑1 (MQ=255)                                                                                                                                tGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCCGGTGCAGAGCACCCGGCCCGACCCGCTGCCGAGGCGAAGACTGCgggac                 >  2:741908/1‑141 (MQ=255)                                                                                                                                tGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTCCCGCGGTCACGACTCCCGGTg                 >  1:283840/1‑143 (MQ=255)                                                                                                                                   cGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGCTCCCTGGCCCATGTGCAGAGCATCTCGCCCGAGCCGCTGCCGAGGTCAAGCATGCGGGTGccc              >  1:637311/1‑143 (MQ=255)                                                                                                                                     ccGAGTTCTTCCGCG‑CGACTCTTTGCCTGCGCGGGGAAGAGCGAACTGATGTCGAGGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTGCCGAGGTCAAGAATGCGGGTGCCCgg            <  1:558151/143‑1 (MQ=255)                                                                                                                                      cGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTGCCGCGGTCAAGAATGCGGGGGCCCGGc           >  1:173485/1‑143 (MQ=255)                                                                                                                                          ctctgCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTGCCGAGGTCAAGAATGCGGGTGCCCGGCTTCa       >  1:338169‑M1/6‑143 (MQ=255)                                                                                                                                            cttcCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCACGTTCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTGCCGAGGTCAAGAATGCGGGTGCCCGGCTTCATg     <  1:137817/143‑1 (MQ=255)                                                                                                                                               CCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTCATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGACCGAGCCGCTGCCGAGGGCAAGAATGCGGGTGCCCGGCTTCGTgcgc  <  2:726646‑M1/143‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                GCTAGCAGCTCCTCCGCCCCGGCAAACCCACCGGCAATCCATGTCGCGCCGACGCAGGCCGCCACGTCACATTTTTCATTTGCGACGTAACCGGCCGCATCGTTATGAATAAAATGTACGCGTTCGCTGACGCCGAGTTCTTCCGCG‑CGACGCTTTGCCTGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTGCCGAGGTCAAGAATGCGGGTGCCCGGCTTCATGCGC  >  NC_000913/4532804‑4533088

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.