New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 416834133 (0.940)9 (0.280) 7/244 NT 22.9% intergenic (+141/‑31) rrsB/gltT 16S ribosomal RNA/tRNA‑Glu
?NC_000913 = 4168363 30 (0.930)intergenic (+163/‑9) rrsB/gltT 16S ribosomal RNA/tRNA‑Glu

TTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAA  >  NC_000913/4168203‑4168482
                                                                                                                                           |                                                                                                                                             
ttaAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCa                                                                                                                                           <  2:244385/143‑1 (MQ=40)
 taAATAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCAc                                                                                                                                          <  2:182919/143‑1 (MQ=255)
    agaagCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCa                                                                                                                                       >  1:408753/1‑143 (MQ=255)
     gacgccgaCTTGGTAGTGCTCACCTAGGTTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCaa                                                                                                                                      <  2:221051/136‑1 (MQ=14)
         cGTATTTTGTAGTGCTCACACAGATTGTCTGATAGAACGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAAcgcg                                                                                                                                  <  1:276666/143‑1 (MQ=255)
         cGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGAGAAAAAAAACGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGATCGCATTCTAATAATGAAAGCTCACCCTACACGAAAATATCACGCAAcgcg                                                                                                                                  >  1:251006/1‑143 (MQ=14)
         cGTACTGTGTAGTGCTCACACAGATTGGCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAAcgcg                                                                                                                                  <  1:178439/143‑1 (MQ=255)
          gTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAACGAAAGCTCACCCTACACGACAATATCCCGCAAcgcgg                                                                                                                                 >  1:186408/1‑142 (MQ=255)
          gTACTTTGTAGGGCTCACACATATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGt                                                                                                                                 <  2:674997/143‑1 (MQ=255)
           tACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAACTATCACGCAACGCGTg                                                                                                                                >  2:200363/1‑143 (MQ=255)
           tACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTg                                                                                                                                >  2:582951/1‑143 (MQ=255)
            aCTTTATACTGCTCGCACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGa                                                                                                                               <  1:437520/143‑1 (MQ=255)
              tttGTAGTGCTCACCCAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCGTTGCGTGATa                                                                                                                             <  1:232699/143‑1 (MQ=255)
              tttGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATa                                                                                                                             >  1:558160/1‑143 (MQ=255)
              tttGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATa                                                                                                                             >  1:164604/1‑143 (MQ=255)
               ttGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATaa                                                                                                                            <  1:99880/143‑1 (MQ=40)
                   aGTGCTCACACAGATTGTGTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAatcacgcgttgcgtgatattttc                                                                                                                         <  2:528387‑M1/143‑24 (MQ=255)
                     tGCTCACACAGATTGTTCGATAGAAAGTGAAAGGCAAGGCGTTTACGCGTTGGGGCTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAatt                                                                                                                      >  2:9210‑M2/1‑140 (MQ=255)
                     tGCTCACACAGAGTGGCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAatt                                                                                                                      >  1:306608‑M2/1‑140 (MQ=255)
                       cTCACACAGATTGGCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAatcacgcgttgcgtgatattttcgtgt                                                                                                                     <  1:406333‑M1/143‑28 (MQ=255)
                        tCACACAGGTTGTGTGATAGAAAGGGAACAGCAAGGCGTTTACGGGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAattttc                                                                                                                   >  2:447572‑M2/1‑137 (MQ=255)
                        ccgcagggattgtctGATAGAACGCGAAAGGCAAGGCGTCTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAattttc                                                                                                                   >  2:159854‑M2/8‑137 (MQ=255)
                          acacaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgt                                                                                                                 <  2:589897‑M1/143‑31 (MQ=255)
                          acacaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAattttcgt                                                                                                                 >  1:619908‑M2/1‑135 (MQ=255)
                            acaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTGCACGAAAATATCACGCAACGCGTGATAAGCAattttcgggt                                                                                                               <  1:577079‑M2/143‑11 (MQ=255)
                             caGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGGATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTc                                                                                                              <  1:656867/143‑1 (MQ=255)
                               gagtgtcTGGTAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAACagcttatcacgcgttgcgtgatattttcgtgtagg                                                                                                            <  1:610025‑M1/140‑36 (MQ=255)
                                 aggtcTGATAGAAAGTGAAGAGTAAGGTGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGTCCGTTCGCTTTCTATTAATTAAAGCTCACCCGACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggt                                                                                                          <  1:516518‑M1/141‑38 (MQ=255)
                                  tGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCtt                                                                                                         >  2:56517/1‑143 (MQ=38)
                                    tCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGGGATAAGCAATTTTCGTGTCCCCTTCg                                                                                                       >  1:11468/1‑143 (MQ=255)
                                      tGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTc                                                                                                     >  1:434867/1‑143 (MQ=38)
                                      tGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCACCTTCgcc                                                                                                     >  2:2140/1‑141 (MQ=255)
                                       gATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCCTACAGGAAAATTTCACGCAAGGGGTGTTAGGAAATTTTCGTTTCCCCttggct                                                                                                     >  1:170075/1‑139 (MQ=11)
                                       gATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCt                                                                                                    <  1:209087/143‑1 (MQ=35)
                                        aTAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTGTTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTa                                                                                                   >  2:80940/1‑143 (MQ=25)
                                        aTAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTa                                                                                                   >  2:224613/1‑143 (MQ=35)
                                         tAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTag                                                                                                  >  1:469772/1‑143 (MQ=35)
                                          aGAAAGTGAAAAGCAAGACGTTTACGCGTTGGGAGAGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTaga                                                                                                 <  1:336501/143‑1 (MQ=18)
                                           gAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCACATTTCGTGTCCCCTTCGTCTagcg                                                                                                >  1:521879/1‑141 (MQ=16)
                                            aaaGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTCGAgg                                                                                               >  2:24718/1‑143 (MQ=17)
                                             aaGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGc                                                                                              <  2:408753/143‑1 (MQ=32)
                                                 gAAAAGCACGGTGTTTACTCCTTCGGAGTGAGGCTGAAGAGCATAAGGCCGTTCCCTTTCTATTAATGAAAGCTCACCCTCCACGAAAATATCACGCAACGCGTGCTTTGCCAATGGCGTGTCTCCTTCTTCTAGAGGCCCAg                                                                                          <  2:146857/143‑1 (MQ=11)
                                                 gAAAAGCACGGCGTTTACGCGTTCGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGACAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAg                                                                                          <  1:469744/143‑1 (MQ=12)
                                                 gAAAAGCAAGGCGTTTACGCTTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCTCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatag                                                                                          <  2:190345‑M1/143‑54 (MQ=255)
                                                  aaaaGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCAGGCAACGCGTGATAAGCAATTGTCGTGTCCTCTTCGTCTAGAGGCCCAgg                                                                                         >  1:628143/1‑143 (MQ=12)
                                                  aaaaGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAgg                                                                                         >  1:551418/1‑143 (MQ=32)
                                                        aaGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgt                                                                                                                 >  2:188501‑M1/1‑83 (MQ=255)
                                                        aaGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgt                                                                                                                 <  1:188501‑M1/113‑31 (MQ=255)
                                                                       tGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctct                                                                    <  1:433664‑M1/143‑76 (MQ=255)
                                                                                      agagAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactccca                                                     <  1:433664‑M2/143‑69 (MQ=255)
                                                                                                            cTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAattttcgtgtagggtgagctttcattaatagaaagagaacggccttattctcttcagcctcactcccaaagcgtaaacgccttgcttttc                               <  2:190345‑M2/143‑91 (MQ=255)
                                                                                                             tagtAATGGAAGCTCCCCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTg                              <  2:14324/140‑1 (MQ=0)
                                                                                                                            aCCCTACACGAAAATATCACGCAACGCGTGATAAGCAattttcgtgtcgggtgagctttaattaatagaaagcgaacggacttattctcttcagcctcactcccaacgcgtaaacaccttactcttcactttctatcagacct               <  1:516518‑M2/143‑107 (MQ=255)
                                                                                                                               ccTACACGAAAATATCACGCAACGCGTGATAAGCTgttttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgtaaacgccttgcttttcactttctaccagacactc             <  1:610025‑M2/143‑109 (MQ=255)
                                                                                                                                  acccgaaAATtgcttatcacgcgttgcgtgatattttcgtgcagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgtaaacgccttgcttttcactttctatcagacaatctgt          <  1:577079‑M1/140‑134 (MQ=255)
                                                                                                                                  acacGAAAATATCACGCAACGCGTGATA‑‑‑tttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgtaaacgccttgcttttcactttctatcagccaatctgtgtgag        <  1:406333‑M2/143‑115 (MQ=255)
                                                                                                                                    acGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgtaaacgccttgcttttcactttctatcagacaatctgtgt        >  1:619908‑M1/1‑8 (MQ=255)
                                                                                                                                    acGAAAATATCACGCAACGCGTGATAAGCAattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgtaaacgccttgcttttcactttctatcagacaatctgtgt        <  2:589897‑M2/143‑114 (MQ=255)
                                                                                                                                    acGAAAATATCACGCAACGCGTGATAAGCAattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgtaaacgcctt                                      <  1:188501‑M2/113‑84 (MQ=255)
                                                                                                                                    acGAAAATATCACGCAACGCGTGATAAGCAattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgtaaacgcctt                                      >  2:188501‑M2/1‑30 (MQ=255)
                                                                                                                                      gAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgtagacgccttgcctttcgcgttctatcagacaatccctgcgg      >  2:159854‑M1/1‑6 (MQ=255)
                                                                                                                                      gAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacccgtaaacgccttgctgttccctttctatcacacaacctgtgtga      >  2:447572‑M1/1‑6 (MQ=255)
                                                                                                                                      gAAAATATCACGCAACGCGTGATA‑‑‑tttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgtaaacgccttgcttttcactttctatcacacaatctgtgtgagcact    <  2:528387‑M2/143‑119 (MQ=255)
                                                                                                                                         aaTtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcagccccaacgcgtaaacgccttgcctttcactttctatcgaacaatctgtgtgagca   >  2:9210‑M1/1‑3 (MQ=255)
                                                                                                                                         aaTtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgtaaacgccttgcttttcactttctatcagccactctgtgtgagca   >  1:306608‑M1/1‑3 (MQ=255)
                                                                                                                                          ttatCACGCGTTGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGCTTGTGAGTGAAAGTCGCCGACCTTaa  >  2:665221/2‑143 (MQ=255)
                                                                                                                                          atatCACGCATCGCGTTATAAGCAATTTTCGTGTCCCCTGCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTaa  <  2:170075/143‑1 (MQ=12)
                                                                                                                                           |                                                                                                                                             
TTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAA  >  NC_000913/4168203‑4168482

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.