| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2835068 = | NA (NA) | 3 (0.050) | 3/250 | NT | NA | noncoding (1/36 nt) | other | REP195a |
| ? | NC_000913 | 2835098 = | NA (NA) | noncoding (31/36 nt) | other | REP195a | |||||
GCTGCGGCGCGTTGGTTAGCGGGTGAAGTCCAGAACGGATAAAACGTGTTGCATTTGGACACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGAc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2835214‑2835068‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccgaCCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGACAA > NC_000913/2835098‑2835238 GCTGCGGCGCGTTGGTTAGCGGGTGAAGTCCAGAACGGATAAAACGTGTTGCATTTGGACACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCAT > 1:1191781/1‑143 CGGCGCGTTGGTTAGCGGGTGAAGTCCAGAACGGATAAAACGTGTTGCATTTGGACACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGA > 1:975673/1‑143 CGGCGCGTTGGTTAGCGGGTGAAGTCCAGAACGGATAAAACGTGTTGCATTTGGACACCATTGCCGGATGCGGCGGAAACGCCTTATCCGGCCTACACATGCGTCCCCGCAGGTCGGCTAAGACGCGCCAGCGGCCCAGCCGA > 2:1064127/1‑143 CGCGTTGGTTAGCGGGTGAAGTCCAGAACGGATAAAACGTGTTGCATGTGGACACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACACCTGCGTCCCCGTAGGTCGGATAAGACCCGCCAGCGTCGCACCCGccat > 2:1273515/1‑139 CCCGTAGGTCGGATAAGACGCGCCAGCGTCTTATCCGACGTACGGGGGCGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGCTTTATCCGTTCTGGACTTAACCCGCTAACCA > 1:1003076/1‑143 CGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACCTACGGGGGCGCATGTGTAGGCCGGATAAGGCGTTGACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTGTCAGCTCTGGACTTCACCCGCTGACCAAC > 2:480655/1‑143 TCGGATAAGACGCGCCAGCGTCGCATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTCAACAACGCGCCG > 1:861459/1‑143 ctgatggGACCTGCGGGGACGCTTGTGGAGGCCGGATAAGGCGTTGACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCA < 1:800138/136‑1 ATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGATAACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGATTTATCGTTGCTGGACTTCACCCGCTAACCAACGCGCCGCGGCAATAACCCCCTGCCCCAGAG > 2:325729/1‑143 CCGACCTACGGGGACGCATGTGTAGGCCGGGTAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAACTGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAACAACCCCCTGCCCCAGAGcc > 2:769801/1‑141 CGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACGGAGTCCAAATGCAACCCGTTTCATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATCACCCCCCGCCCCAGCGACc > 2:755500/1‑142 GACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCACCTGCCCTAGAGgcga > 2:963684/1‑139 GCTGCGGCGCGTTGGTTAGCGGGTGAAGTCCAGAACGGATAAAACGTGTTGCATTTGGACACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGAc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2835214‑2835068‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccgaCCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGACAA > NC_000913/2835098‑2835238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |