New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2835068 =NA (NA)3 (0.050) 3/250 NT NA noncoding (1/36 nt) other REP195a
?NC_000913 2835098 = NA (NA)noncoding (31/36 nt) other REP195a

CCGAACGCCAGGGAATGGTGGCGCGCGGCGTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCG  >  NC_000913/2834927‑2835210
                                                                                                                                             |                                                                                                                                              
tcgcctctagggcaggtggttattgctgcggcgcgttggttagcgggtgaagtccagaacggataaaacgtgttgcatttggacaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtaggTc                                                                                                                                               >  2:963684‑M1/142‑143 (MQ=255)
 ggtcgctggggcggggggtgattgctgcggcgcgttggttagcgggtgaagtccagaacggatgaaacgggttgcatttggactccgttgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtaggTCg                                                                                                                                              >  2:755500‑M1/141‑143 (MQ=255)
 cGAACGCCAGGGAATGGTGGCGCGCGGCGTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCg                                                                                                                                              <  2:86346/143‑1 (MQ=255)
  ggctctggggcagggggttgttgctgcggcgcgttggttagcgggtgaagtccagaacggataaaacgtgttgcagttggacaccattgccggatgcggcgtaaacgccttacccggcctacacatgcgtccccgtaggTCgg                                                                                                                                             >  2:769801‑M1/140‑143 (MQ=255)
  gAACGCCAGGGAATGGTGGCGCGCGGCGTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGCTGAAAGAGGCATATGGATTTATTAACGTATTGCCGATGTAGGCGGGCTACTGTGCCTAAGCTGTCgg                                                                                                                                             >  1:871845/1‑143 (MQ=255)
    ctctggggcagggggttattgccgcggcgcgttggttagcgggtgaagtccagcaacgataaatcgtgttgcatttggacaccattgccggatgcggcgttatcgccttatccggcctacacatgcgtccccgtaggTCGGAt                                                                                                                                           >  2:325729‑M1/138‑143 (MQ=255)
      gCCAGGGAATGGTGGCGCGCGGCGTTGACGATACTGACAAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCGAAAATGTCGGATGc                                                                                                                                         >  1:944292/1‑143 (MQ=255)
       tggggcagggggttattgctgcggcgcgttggttagcgggtgaagtccagaacggataaaacgtgttgcatttggacaccattgccggatgcggcgtcaacgccttatccggcctccacaagcgtccccgcaggtcccatcag                                                                                                                                        <  1:800138‑M1/9‑8 (MQ=255)
       ccAGGGCATGGCGGCGCGCGGCGTTGACCATGTTGTCCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCg                                                                                                                                        <  2:898275/143‑1 (MQ=255)
         aGGGAATGGTGGCGCGCGGCGTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGAc                                                                                                                                      >  1:939871/1‑143 (MQ=255)
              aTGGTGGCGCGCGGCGTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATAGGATAAAAGGGGCATTTGGATTGTTGCAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGACGGATGCGACGCggg                                                                                                                                 >  2:212425/1‑143 (MQ=255)
                  tggCGCGCGGCGTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGAGGCGCTGGcccg                                                                                                                             >  2:118577/1‑143 (MQ=255)
                    gcgcgcGGCGTGGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGGGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTTCAATTTCGGATGCGACGCTGGCGCGTc                                                                                                                           <  2:1120913/143‑1 (MQ=255)
                     cgcgcgGCGGTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCt                                                                                                                          <  1:65966/143‑1 (MQ=255)
                         cggcgTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGGGAGGATCGGATGAAAGCGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATc                                                                                                                      <  2:856045/143‑1 (MQ=255)
                          ggcgTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATcc                                                                                                                     <  1:1017343/143‑1 (MQ=255)
                          ggcgTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACGGTGCCTAAAATGTGGGATGCGACGCTGGCGCAGCTTAtaa                                                                                                                     >  1:186057/1‑141 (MQ=255)
                            cggcgcgttgttgagcgggtgaagtccagaacggataaaacgtgttgcatttggacaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtaggTCGGATGCGACGCTGGCGCGTCTTATCCGa                                                                                                                   >  1:861459‑M1/114‑143 (MQ=255)
                             gTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGACGGATGCGACGCTGGCGCGTCTTATCCGAc                                                                                                                  >  2:1175514/1‑143 (MQ=255)
                                  gttggtcagcgggtgaagtccagagctgacaaaacgtgttgcatttggacaccattgccggatgcggcgtcaacgccttatccggcctacacatgcgcccccgtaggTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACg                                                                                                             >  2:480655‑M1/108‑143 (MQ=255)
                                   gATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGCTGCAAGAGACATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTCATCCGACCTACgg                                                                                                            >  2:174697/1‑143 (MQ=255)
                                    tggttagcgggttaagtccagaacggataaagcgtgttgcatttggacaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgcccccgtacgTCGGATAAGACGCTGGCGCGTCTTATCCGACCTACggg                                                                                                           >  1:1003076‑M1/106‑143 (MQ=255)
                                      gCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGa                                                                                                         <  1:763082/143‑1 (MQ=255)
                                        tGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACg                                                                                                       >  2:1003918/1‑143 (MQ=255)
                                           ccAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCAGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGAGCTACGGGGACGCAt                                                                                                    >  1:715839/1‑143 (MQ=255)
                                                 tcccgcCTTTGTGGTCAGTGAGGATCGGATGAAAGGGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAg                                                                                              <  2:1063110/140‑1 (MQ=255)
                                                 tCGCGCCTTTGTGGTCAGTTAGGATCGTATGAAAGAGGCATTTGGATTGTTGAAAACATTTCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAg                                                                                              <  2:334142/143‑1 (MQ=255)
                                                      ccTTTGTGGTCAGTGAGGATCGGATGAAAGAGACATTTGGATTGTTGAAAAGATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCCTGTGTAGGCAgg                                                                                         >  2:671866/1‑143 (MQ=255)
                                                       tgtggtgGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGTCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGa                                                                                        <  1:1053476/139‑1 (MQ=255)
                                                        tttGTGGTCATTGAGGAGCGGAGGAAAGAGGCATTTGGATTGTTGAAAACATGGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGAt                                                                                       <  2:699994/143‑1 (MQ=255)
                                                            tgGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAATACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAgg                                                                                   <  1:369721/143‑1 (MQ=255)
                                                               tCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGGTACTGGGCCGAAGATGTCGGATGCGACGCTGGCGCGTCTTATCCGGCCTACGGGGACGCATGTGTAGGCCGCATAAGGCGt                                                                                >  1:632433/1‑143 (MQ=39)
                                                                cAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCCACGCTGGCGCGTCTTATCCGACCTACGGGGACGAACGTGGGGGCCGGATacgaggtt                                                                               >  2:1235664/1‑136 (MQ=38)
                                                                cAGTGAGGATCGGATGAAAGACGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGtt                                                                               <  1:40630/143‑1 (MQ=255)
                                                                 aGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGGTAAGGCGatt                                                                              >  1:476146/1‑143 (MQ=255)
                                                                 aGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGttt                                                                              >  1:835731/1‑143 (MQ=255)
                                                                 aGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCACGGGTCGGCCGGCTAAGGCGctt                                                                              >  2:180859/1‑143 (MQ=38)
                                                                  gcggggAACGCATGAAGGGGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTa                                                                             <  2:69287/139‑1 (MQ=37)
                                                                   tGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAc                                                                            <  1:1109089/143‑1 (MQ=255)
                                                                    gcggAGCGGATGGAAGAGGCAGTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcg                                                                           <  2:810044/141‑1 (MQ=255)
                                                                     aGGATCGGATGACCGAGGGATTGGGATGGTCGCGCGCGTTGCCGTTGTTGGTGGGCGCCTGTGCCTCAGATGTCGGGTGCGACGCTGGCGCGTGTTATCCGGCCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgc                                                                          <  2:522555/143‑1 (MQ=12)
                                                                       gATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATCAGGCGTTTAcgccg                                                                        >  1:837293/1‑143 (MQ=255)
                                                                        aTCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCAGGATAAGGCGGTTAcggcgc                                                                       >  1:145611/1‑143 (MQ=255)
                                                                            gATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATcc                                                                   >  2:65338/1‑143 (MQ=255)
                                                                                  agagGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGAACGGGCTGCTGATCTGAACTAAGCGCACGAATGAGTAGGCCGGATAAGGCGTGTACGCCGCATCCGGCaaa                                                             >  1:998463/1‑142 (MQ=255)
                                                                                   gagGCATTTGGATTGGTGAAACCATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGCGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                                                            <  1:361040/143‑1 (MQ=255)
                                                                                      gCATTTGGATTGTTGAAAACATTGCCGATGTAGGCGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCCATGgtg                                                         >  2:1042873/1‑143 (MQ=255)
                                                                                           tGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCGATGGTGTCCac                                                    >  1:214325/1‑142 (MQ=255)
                                                                                               tggttgGAATCTTTGCCGATGTAGGTGGGCTACTGTGCTTAATATGTTGGATGCGACGCTGGCGCGTCTAATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGc                                                <  1:1001247/141‑1 (MQ=21)
                                                                                                tgttgAAAACATCGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa                                               <  1:929051/143‑1 (MQ=255)
                                                                                                  ttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAGATGCAac                                             >  1:208109/1‑143 (MQ=255)
                                                                                                     aaaaCATTGCCGATGTAGGTGGGCTACTGTGCCGAACATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACg                                          <  1:328165/143‑1 (MQ=255)
                                                                                                       aagaTTGGCGATGGAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtt                                        <  2:750104/140‑1 (MQ=255)
                                                                                                       aaCATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtt                                        <  1:608891/143‑1 (MQ=255)
                                                                                                       aaCAGTGCCGATGTCGGTGGGCTACTGTGCCTAAAATGGCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtt                                        <  2:285925/143‑1 (MQ=255)
                                                                                                             gCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATcc                                  <  1:1245840/143‑1 (MQ=255)
                                                                                                              ccGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATTCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTATGCCGGATAAGGCGTTTACGCCGCATCCGGCATTGGTGTCCAAATGCAACACGTTTTATCCg                                 >  1:22222/1‑143 (MQ=255)
                                                                                                                   gTAGGTGGGCTACTGTGCCTAAAATGTCGGGTGCGACGCGGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTg                            <  2:926385/143‑1 (MQ=255)
                                                                                                                     aGGTGGGCTACTGTGCCTAAAATGTCGGATGCGCTGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGa                          <  1:1137406/143‑1 (MQ=255)
                                                                                                                     aGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGa                          <  1:268781/143‑1 (MQ=255)
                                                                                                                     aGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTGTTATCCGTTGTGGa                          >  1:859081/1‑143 (MQ=255)
                                                                                                                       gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATGCGGCAATGGGGTCCAAAAGCAACACGTTGTAACCGTGCTGGAca                        >  2:991625/1‑142 (MQ=25)
                                                                                                                           gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAc                    >  2:1066192/1‑143 (MQ=255)
                                                                                                                                  tgCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGACTCTAGGGCTAAGCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAcgcggtca             >  1:1272012/1‑139 (MQ=25)
                                                                                                                                     cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCa          >  1:970931/1‑143 (MQ=255)
                                                                                                                                     cTAAAATGTCAGTATTGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTATCCAAATGCAACACGTTATATCCGTTCTGGACTTCCCCCGCTAACCa          >  2:277816/1‑143 (MQ=25)
                                                                                                                                     cTAAAAGGTCGGATGCGACCGTGGCGCGTCGTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCa          <  1:1235664/143‑1 (MQ=255)
                                                                                                                                             TCGGCTGGGCCGCTGGCGCGTCTTAGCCGACCTGCGGGGACGCATGTGTAGGCCGGATAAGGCGTTTCCGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGcgccg  >  2:1064127‑M1/1‑143 (MQ=255)
                                                                                                                                             TCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGcgccg  >  1:975673‑M1/1‑143 (MQ=255)
                                                                                                                                             |                                                                                                                                              
CCGAACGCCAGGGAATGGTGGCGCGCGGCGTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCG  >  NC_000913/2834927‑2835210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.