New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 206455	53 (0.800)	3 (0.050)	3/256	NT	5.5%	coding (1330/3483 nt)	dnaE	DNA polymerase III subunit alpha
	?	NC_000913	= 206463	52 (0.810)					coding (1338/3483 nt)	dnaE	DNA polymerase III subunit alpha

TCTCCATGCCTGACTTCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCGGAAATCTACGAAGCGGATGAAGAA  >  NC_000913/206315‑206595                                                                                                                                             |                                                                                                                                             tctcCATGCCTGACTTCGACGTTGACTTCTGTATGGAGACACGCGCTCAGGTTATCGAGCACGTAGCGGACATGGACGGTCGTGATGCGGTCTCGCAGATCATCAGCCTCGGCACAATGGCGGCCAGAGCGGCGATCCGCGAc                                                                                                                                            >  2:545888/1‑143 (MQ=255) tctcCATGCCTGACTTCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGAGGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCCAACGCGGGGATCCGCGAc                                                                                                                                            >  2:378707/1‑143 (MQ=255)          cTGACTTCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCcgc                                                                                                                                   <  2:426670‑M2/143‑4 (MQ=255)          cTGACTTCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGCACCATGGCGGCGAACGCGGTGATCCGCGACGTAGGCcgc                                                                                                                                   <  2:143012‑M2/143‑4 (MQ=255)          cTGACTTCGACGTTGACTTCTGTATGGAGAAACGCGATAAGTTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGGTCCGCGACGTAGGCcgc                                                                                                                                   <  1:542580‑M2/143‑4 (MQ=255)               ttCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGGAAGCGGTGATCCGCGACGGAGGCCGCGTGCt                                                                                                                              >  1:137116/1‑143 (MQ=255)               ttCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCt                                                                                                                              >  1:380523/1‑143 (MQ=255)               ttCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAACCGGTGCTCCGCGACGTAGCCCGCGTGCt                                                                                                                              >  2:604012/1‑143 (MQ=255)                tCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCGTCACCTTCGGTACACTGGCGGCGAAAGCGGTGGTCCGCGACGTAGGCTGCGTgagg                                                                                                                             >  2:1264396/1‑140 (MQ=255)                tCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGgcctacgtcgcggatca                                                                                                                             <  1:506210‑M1/143‑18 (MQ=255)                   ctgTTGACTTCTGTATGGAGAACCGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTgggg                                                                                                                          <  2:1162224/141‑1 (MQ=255)                      ttGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCAt                                                                                                                       >  2:723001/1‑143 (MQ=255)                           ttCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTa                                                                                                                  >  2:29160/1‑143 (MQ=255)                               gTATGGAGAAACGCGATCAGGGTATCGAGCACGTAGCGTACATGTCCGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGTCGTAGGCCGCGTGCTGGGGCATCCGTACGGc                                                                                                              <  2:774933/143‑1 (MQ=255)                                tATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAGTGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCCTGCTGGCGCCTCCGTGCGGcc                                                                                                             >  2:101763/1‑142 (MQ=255)                                tATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCt                                                                                                             >  2:459467/1‑143 (MQ=255)                                  tGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGGAGCCGGACGGCtgt                                                                                                           >  2:485526/1‑141 (MQ=255)                                  gggAGAAACGCGAGCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCttt                                                                                                           <  1:462816/142‑1 (MQ=255)                                   tgagagtcgcgATCAGGTGCACTAGCTCGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCAGCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTg                                                                                                          <  2:1019528/136‑1 (MQ=255)                                    gagaAACGCGATCAGGTTATCGAGCCCGTAGCTGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCTGCGGCGCAGACCGCGTGCTGGGGCGTCCGGACGGCGTTGt                                                                                                         >  2:777323/1‑143 (MQ=255)                                        aaCGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCggt                                                                                                     >  1:375263/1‑141 (MQ=255)                                             gATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCAGCCGTACGGCTTTGTCGGGCGTAt                                                                                                >  2:983339/1‑143 (MQ=255)                                              aTCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTAGCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTAtc                                                                                               <  1:848739/143‑1 (MQ=255)                                               tCAGGTTACTGAGGCCGTAGCGGACAGGTGCGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTAtct                                                                                              <  1:306928/143‑1 (MQ=255)                                                cAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTAtctc                                                                                             <  1:606740/143‑1 (MQ=255)                                                     tATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGCTCGTATCTCgtttc                                                                                        >  1:570956/1‑139 (MQ=255)                                                        cGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGGACGGCTTTGTCGATCGTATCTCGAAACTGa                                                                                     >  2:696810/1‑143 (MQ=255)                                                                      aCATGTACGGTCAAAATGCTGGATTGGGGGTAAGCACCGGCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCg                                                                       >  2:1253966/1‑143 (MQ=255)                                                                       cATGTCTGGGCGTGATGCGGTATCGCGGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCgg                                                                      <  1:1215719/143‑1 (MQ=255)                                                                           tACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGAt                                                                  >  1:909800/1‑143 (MQ=255)                                                                           tACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGAt                                                                  >  1:465656/1‑143 (MQ=255)                                                                           tACGGGCGTGATGGGGGATCGCGGATCAGCCCCGCCGGTGCATTGGCGGCGAACGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGGACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGAt                                                                  <  2:204702/143‑1 (MQ=255)                                                                                  gTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGgcctacgtcgcggatcac                                                                                                                            >  1:584683‑M1/1‑60 (MQ=255)                                                                                  gTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGgcctacgtcgcggatcac                                                                                                                            <  2:584683‑M1/78‑19 (MQ=255)                                                                                   tGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGCCGCTgg                                                          >  1:175870/1‑143 (MQ=255)                                                                                        cGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATAGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGaaa                                                     >  1:882501/1‑143 (MQ=255)                                                                                          ggaTCGCAGATCATCACATTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGc                                                   <  1:987543/141‑1 (MQ=255)                                                                                           tATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCg                                                  >  1:1102093/1‑143 (MQ=255)                                                                                             tCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGAATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGtt                                                >  1:152932/1‑143 (MQ=255)                                                                                                 ggATCATCGCCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGaa                                            <  1:1101463/142‑1 (MQ=255)                                                                                                   ttcagcaCCGTCGGTACAAGGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAagt                                          <  1:405262/142‑2 (MQ=255)                                                                                                   atcatcACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGGTCGCACCTCGAAACTCATCCCGCCCGATCCGGGGCCGACGCGGGCGAAACCGCTTGAagc                                          >  2:1108510/1‑143 (MQ=255)                                                                                                   atcatcACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAagc                                          <  1:1153538/143‑1 (MQ=255)                                                                                                     catcaCCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGCACGCGTCTGAggccg                                        >  2:1174824/1‑143 (MQ=255)                                                                                                      atcaCCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGACCGTATCTCGAAACTGATCCCGCCCGAGCCGGGGATCACGCTGGCGGAAGCGTTTGAggccga                                       >  2:534151/1‑143 (MQ=255)                                                                                                            ttCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAACGCGTTTGAAGCCGCGTCGCa                                 >  2:360711/1‑143 (MQ=255)                                                                                                            ttCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCa                                 >  1:841280/1‑143 (MQ=255)                                                                                                             tCGGTACGGCGGCGGCGCAAGCGGTGATCCCTGGCGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTTGATCGTATGTCGCAGCTGATCCCGCCCGATCCGGGGAGGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAg                                <  2:33107/143‑1 (MQ=255)                                                                                                             tCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCCAGCCGCAg                                >  1:416493/1‑143 (MQ=255)                                                                                                                   cAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCg                          <  2:542580/143‑1 (MQ=255)                                                                                                                   cAATGGCGCCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCCTCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCg                          <  1:817249/143‑1 (MQ=255)                                                                                                                     aTGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCCACACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGACGAGCAGCAGCTGcgcga                        >  2:720297/1‑139 (MQ=255)                                                                                                                       ggcggcGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGGATCTCGAAACTGATCCCGCGCGAGCCGGGGATGACGCTGGGGAAAGCGTTTGAAGACGAGGCGCAGCCGCCGaaaa                      >  1:1272917/1‑143 (MQ=255)                                                                                                                          ggcgAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCGGAAATCt                   >  2:603220/1‑143 (MQ=255)                                                                                                                            cgAAAGCGGTGATCCGCGACGGAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCGGAAATCTAc                 <  1:426670/143‑1 (MQ=255)                                                                                                                             gAAAGCGGTGATCCGCGACGTAGGCCGTGTGTTGGGGCACCCCAACAGCTTTGTCGATCGTAGCTCGAAACCGATCCCACCCAAACCGAGAAAGACACCGGCCAAAGCGAAAAAACCCGAGCCGCAGCTGCCGCAAATCAAca                >  2:153317/1‑142 (MQ=255)                                                                                                                              aaaGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAagc                                          <  2:757132/116‑1 (MQ=255)                                                                                                                              aaaGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAagc                                          >  1:757132/1‑116 (MQ=255)                                                                                                                              aaaGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGAGCGTATCTGAACACTGATCCCGCCCGATGCGGGGATGACGCTGGCGAAAGCGTATGAGGCCGGGCCGGCGCTGCCGGAAATATACGa               >  2:1184288/1‑143 (MQ=255)                                                                                                                                    gTGATCCGCGACGTAGGCcgcggatcaccgctttcgccgccattgtaccgaaggtgatgatctgcgataccgcatcac                                                                          >  1:584683‑M2/1‑18 (MQ=255)                                                                                                                                    gTGATCCGCGACGTAGGCcgcggatcaccgctttcgccgccattgtaccgaaggtgatgatctgcgataccgcatcac                                                                          <  2:584683‑M2/78‑61 (MQ=255)                                                                                                                                     tGATCCGCGACGTAGGCcgcggatcaccgctttcgccgccattgtaccgaaggtgatgatctgcgataccgcatcacgaccgtacatgtccgctacgtgctcgataacctgatcgcgtttctccatacagaagtcaacgtcga        <  1:506210‑M2/143‑127 (MQ=255)                                                                                                                                     tGATCCGCGACGTAGGCCGAGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCACGCACGATACGGGGATGACGCTGCCGAAAGCGTTTGAAGAGGAGACGCAGTTGCCGGGAATCTACGGAGAGGag        >  2:47362/1‑142 (MQ=255)                                                                                                                                      gATCCGCGACGTAGGCCGCGTGCGGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCGGAAATCTACGAAGCGGATg       <  1:723001/143‑1 (MQ=255)                                                                                                                                          cgcgACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCCGCTGCCGGAAATCTACGAAGCGGATgaaga   >  1:408329/1‑143 (MQ=255)                                                                                                                                           gcggcctacgtcgcggatcaccgctttcgccgccattgtaccgaaggtgatgatctgcgataccgcatcacgaccgtacatgtccgctacgtgctcgataacctgatcgcgtttctccatacagaagtcaacgtcgaagtcag  <  2:426670‑M1/143‑141 (MQ=255)                                                                                                                                           gcggcctacgtcgcggatcaccgcgttcgccgccatggtgccgaaggtgatgatctgcgataccgcatcacgaccgtacatgtccgctacgtgctcgataacctgatcgcgtttctccatacagaagtcaacgtcgaagtcag  <  2:143012‑M1/143‑141 (MQ=255)                                                                                                                                           gcggcctacgtcgcggaccaccgctttcgccgccattgtaccgaaggtgatgatctgcgataccgcatcacgaccgtacatgtccgctacgtgctcgataaacttatcgcgtttctccatacagaagtcaacgtcgaagtcag  <  1:542580‑M1/143‑141 (MQ=255)                                                                                                                                           gcgACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCGGAAATCTACGAAGCGGATgaagaa  <  1:464434/143‑1 (MQ=255)                                                                                                                                             |                                                                                                                                             TCTCCATGCCTGACTTCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCGGAAATCTACGAAGCGGATGAAGAA  >  NC_000913/206315‑206595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.