New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 206455	53 (0.800)	3 (0.050)	3/256	NT	5.5%	coding (1330/3483 nt)	dnaE	DNA polymerase III subunit alpha
	?	NC_000913	= 206463	52 (0.810)					coding (1338/3483 nt)	dnaE	DNA polymerase III subunit alpha

CTGACTTCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCGGAAATCTACGAAGCGGATGAAGAAGTTAAGGCGC  >  NC_000913/206324‑206605                                                                                                                                            |                                                                                                                                               cTGACTTCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCcgc                                                                                                                                             <  2:426670‑M2/143‑4 (MQ=255) cTGACTTCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGCACCATGGCGGCGAACGCGGTGATCCGCGACGTAGGCcgc                                                                                                                                             <  2:143012‑M2/143‑4 (MQ=255) cTGACTTCGACGTTGACTTCTGTATGGAGAAACGCGATAAGTTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGGTCCGCGACGTAGGCcgc                                                                                                                                             <  1:542580‑M2/143‑4 (MQ=255)      ttCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGGAAGCGGTGATCCGCGACGGAGGCCGCGTGCt                                                                                                                                        >  1:137116/1‑143 (MQ=255)      ttCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCt                                                                                                                                        >  1:380523/1‑143 (MQ=255)      ttCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAACCGGTGCTCCGCGACGTAGCCCGCGTGCt                                                                                                                                        >  2:604012/1‑143 (MQ=255)       tCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCGTCACCTTCGGTACACTGGCGGCGAAAGCGGTGGTCCGCGACGTAGGCTGCGTgagg                                                                                                                                       >  2:1264396/1‑140 (MQ=255)          ctgTTGACTTCTGTATGGAGAACCGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTgggg                                                                                                                                    <  2:1162224/141‑1 (MQ=255)             ttGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCAt                                                                                                                                 >  2:723001/1‑143 (MQ=255)                  ttCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTa                                                                                                                            >  2:29160/1‑143 (MQ=255)                      gTATGGAGAAACGCGATCAGGGTATCGAGCACGTAGCGTACATGTCCGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGTCGTAGGCCGCGTGCTGGGGCATCCGTACGGc                                                                                                                        <  2:774933/143‑1 (MQ=255)                       tATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAGTGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCCTGCTGGCGCCTCCGTGCGGcc                                                                                                                       >  2:101763/1‑142 (MQ=255)                       tATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCt                                                                                                                       >  2:459467/1‑143 (MQ=255)                         tGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGGAGCCGGACGGCtgt                                                                                                                     >  2:485526/1‑141 (MQ=255)                         gggAGAAACGCGAGCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCttt                                                                                                                     <  1:462816/142‑1 (MQ=255)                          tgagagtcgcgATCAGGTGCACTAGCTCGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCAGCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTg                                                                                                                    <  2:1019528/136‑1 (MQ=255)                           gagaAACGCGATCAGGTTATCGAGCCCGTAGCTGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCTGCGGCGCAGACCGCGTGCTGGGGCGTCCGGACGGCGTTGt                                                                                                                   >  2:777323/1‑143 (MQ=255)                               aaCGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCggt                                                                                                               >  1:375263/1‑141 (MQ=255)                                    gATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCAGCCGTACGGCTTTGTCGGGCGTAt                                                                                                          >  2:983339/1‑143 (MQ=255)                                     aTCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTAGCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTAtc                                                                                                         <  1:848739/143‑1 (MQ=255)                                      tCAGGTTACTGAGGCCGTAGCGGACAGGTGCGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTAtct                                                                                                        <  1:306928/143‑1 (MQ=255)                                       cAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTAtctc                                                                                                       <  1:606740/143‑1 (MQ=255)                                            tATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGCTCGTATCTCgtttc                                                                                                  >  1:570956/1‑139 (MQ=255)                                               cGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGGACGGCTTTGTCGATCGTATCTCGAAACTGa                                                                                               >  2:696810/1‑143 (MQ=255)                                                             aCATGTACGGTCAAAATGCTGGATTGGGGGTAAGCACCGGCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCg                                                                                 >  2:1253966/1‑143 (MQ=255)                                                              cATGTCTGGGCGTGATGCGGTATCGCGGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCgg                                                                                <  1:1215719/143‑1 (MQ=255)                                                                  tACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGAt                                                                            >  1:465656/1‑143 (MQ=255)                                                                  tACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGAt                                                                            >  1:909800/1‑143 (MQ=255)                                                                  tACGGGCGTGATGGGGGATCGCGGATCAGCCCCGCCGGTGCATTGGCGGCGAACGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGGACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGAt                                                                            <  2:204702/143‑1 (MQ=255)                                                                          tGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGCCGCTgg                                                                    >  1:175870/1‑143 (MQ=255)                                                                               cGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATAGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGaaa                                                               >  1:882501/1‑143 (MQ=255)                                                                                 ggaTCGCAGATCATCACATTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGc                                                             <  1:987543/141‑1 (MQ=255)                                                                                  tATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCg                                                            >  1:1102093/1‑143 (MQ=255)                                                                                    tCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGAATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGtt                                                          >  1:152932/1‑143 (MQ=255)                                                                                        ggATCATCGCCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGaa                                                      <  1:1101463/142‑1 (MQ=255)                                                                                          ttcagcaCCGTCGGTACAAGGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAagt                                                    <  1:405262/142‑2 (MQ=255)                                                                                          atcatcACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGGTCGCACCTCGAAACTCATCCCGCCCGATCCGGGGCCGACGCGGGCGAAACCGCTTGAagc                                                    >  2:1108510/1‑143 (MQ=255)                                                                                          atcatcACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAagc                                                    <  1:1153538/143‑1 (MQ=255)                                                                                            catcaCCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGCACGCGTCTGAggccg                                                  >  2:1174824/1‑143 (MQ=255)                                                                                             atcaCCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGACCGTATCTCGAAACTGATCCCGCCCGAGCCGGGGATCACGCTGGCGGAAGCGTTTGAggccga                                                 >  2:534151/1‑143 (MQ=255)                                                                                                   ttCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAACGCGTTTGAAGCCGCGTCGCa                                           >  2:360711/1‑143 (MQ=255)                                                                                                   ttCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCa                                           >  1:841280/1‑143 (MQ=255)                                                                                                    tCGGTACGGCGGCGGCGCAAGCGGTGATCCCTGGCGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTTGATCGTATGTCGCAGCTGATCCCGCCCGATCCGGGGAGGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAg                                          <  2:33107/143‑1 (MQ=255)                                                                                                    tCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCCAGCCGCAg                                          >  1:416493/1‑143 (MQ=255)                                                                                                          cAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCg                                    <  2:542580/143‑1 (MQ=255)                                                                                                          cAATGGCGCCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCCTCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCg                                    <  1:817249/143‑1 (MQ=255)                                                                                                            aTGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCCACACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGACGAGCAGCAGCTGcgcga                                  >  2:720297/1‑139 (MQ=255)                                                                                                              ggcggcGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGGATCTCGAAACTGATCCCGCGCGAGCCGGGGATGACGCTGGGGAAAGCGTTTGAAGACGAGGCGCAGCCGCCGaaaa                                >  1:1272917/1‑143 (MQ=255)                                                                                                                 ggcgAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCGGAAATCt                             >  2:603220/1‑143 (MQ=255)                                                                                                                   cgAAAGCGGTGATCCGCGACGGAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCGGAAATCTAc                           <  1:426670/143‑1 (MQ=255)                                                                                                                    gAAAGCGGTGATCCGCGACGTAGGCCGTGTGTTGGGGCACCCCAACAGCTTTGTCGATCGTAGCTCGAAACCGATCCCACCCAAACCGAGAAAGACACCGGCCAAAGCGAAAAAACCCGAGCCGCAGCTGCCGCAAATCAAca                          >  2:153317/1‑142 (MQ=255)                                                                                                                     aaaGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAagc                                                    <  2:757132/116‑1 (MQ=255)                                                                                                                     aaaGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAagc                                                    >  1:757132/1‑116 (MQ=255)                                                                                                                     aaaGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGAGCGTATCTGAACACTGATCCCGCCCGATGCGGGGATGACGCTGGCGAAAGCGTATGAGGCCGGGCCGGCGCTGCCGGAAATATACGa                         >  2:1184288/1‑143 (MQ=255)                                                                                                                           gTGATCCGCGACGTAGGCcgcggatcaccgctttcgccgccattgtaccgaaggtgatgatctgcgataccgcatcac                                                                                    >  1:584683‑M2/1‑18 (MQ=255)                                                                                                                           gTGATCCGCGACGTAGGCcgcggatcaccgctttcgccgccattgtaccgaaggtgatgatctgcgataccgcatcac                                                                                    <  2:584683‑M2/78‑61 (MQ=255)                                                                                                                            tGATCCGCGACGTAGGCcgcggatcaccgctttcgccgccattgtaccgaaggtgatgatctgcgataccgcatcacgaccgtacatgtccgctacgtgctcgataacctgatcgcgtttctccatacagaagtcaacgtcga                  <  1:506210‑M2/143‑127 (MQ=255)                                                                                                                            tGATCCGCGACGTAGGCCGAGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCACGCACGATACGGGGATGACGCTGCCGAAAGCGTTTGAAGAGGAGACGCAGTTGCCGGGAATCTACGGAGAGGag                  >  2:47362/1‑142 (MQ=255)                                                                                                                             gATCCGCGACGTAGGCCGCGTGCGGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCGGAAATCTACGAAGCGGATg                 <  1:723001/143‑1 (MQ=255)                                                                                                                                 cgcgACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCCGCTGCCGGAAATCTACGAAGCGGATgaaga             >  1:408329/1‑143 (MQ=255)                                                                                                                                  gcgACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCGGAAATCTACGAAGCGGATgaagaa            <  1:464434/143‑1 (MQ=255)                                                                                                                                       gTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCCGCGGCCGGAAATCTTCGGAGCGGTTTAGGAGGTTaa       >  1:1166949/1‑143 (MQ=255)                                                                                                                                         aGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGACACTGATCCCGCCCGATCCGGGGATGTCGCTGGCGGAAGCGTTTGAAGCCGAGCAGAAGCTGCCGGACAACTACGAAACGGAGGAACAACTAAAgg     >  2:545208/1‑143 (MQ=255)                                                                                                                                          ggCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCGGAAATCTACGAAGCGGATGAAGAAGTTAAGgc    >  1:445999/1‑143 (MQ=255)                                                                                                                                           gCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGCAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCGGAAATCTACGAAGCGGATGAAGAAGTGACGgcg   >  2:324389/1‑143 (MQ=255)                                                                                                                                            ccGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCGGAAATCTACGAAGCGGATGAAGAAGTTAAGgcgc  >  2:1204895/1‑143 (MQ=255)                                                                                                                                            |                                                                                                                                               CTGACTTCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCGGAAATCTACGAAGCGGATGAAGAAGTTAAGGCGC  >  NC_000913/206324‑206605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.